Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 17:53:56 (9700): vboxwrapper version 26210
2026-01-10 17:53:56 (9700): BOINC client version: 8.2.8
2026-01-10 17:53:57 (9700): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-10 17:53:57 (9700): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 17:53:57 (9700): Create VM. (boinc_28d98dd8a6b68121, slot#1)
2026-01-10 17:53:58 (9700): Setting Memory Size for VM. (4400MB)
2026-01-10 17:53:58 (9700): Setting CPU Count for VM. (4)
2026-01-10 17:53:58 (9700): Setting Chipset Options for VM.
2026-01-10 17:53:58 (9700): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 17:53:59 (9700): Setting Boot Options for VM.
2026-01-10 17:53:59 (9700): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 17:53:59 (9700): Enabling VM Network Access.
2026-01-10 17:54:00 (9700): Disabling USB Support for VM.
2026-01-10 17:54:00 (9700): Disabling COM Port Support for VM.
2026-01-10 17:54:00 (9700): Disabling LPT Port Support for VM.
2026-01-10 17:54:01 (9700): Disabling Audio Support for VM.
2026-01-10 17:54:01 (9700): Disabling Clipboard Support for VM.
2026-01-10 17:54:01 (9700): Disabling Drag and Drop Support for VM.
2026-01-10 17:54:01 (9700): Adding storage controller(s) to VM.
2026-01-10 17:54:02 (9700): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 17:54:02 (9700): Adding VirtualBox Guest Additions to VM.
2026-01-10 17:54:02 (9700): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 17:54:03 (9700): forwarding host port 59373 to guest port 80
2026-01-10 17:54:03 (9700): Enabling remote desktop for VM.
2026-01-10 17:54:03 (9700): Required extension pack not installed, remote desktop not enabled.
2026-01-10 17:54:03 (9700): Enabling shared directory for VM.
2026-01-10 17:54:04 (9700): Starting VM using VBoxManage interface. (boinc_28d98dd8a6b68121, slot#1)
2026-01-10 17:54:09 (9700): Successfully started VM. (PID = '6272')
2026-01-10 17:54:09 (9700): Reporting VM Process ID to BOINC.
2026-01-10 17:54:09 (9700): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-10 17:54:09 (9700): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 17:54:09 (9700): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 17:54:09 (9700): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 17:54:09 (9700): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 17:54:09 (9700): Detected: Web Application Enabled (http://localhost:59373)
2026-01-10 17:54:09 (9700): Preference change detected
2026-01-10 17:54:09 (9700): Setting CPU throttle for VM. (100%)
2026-01-10 17:54:09 (9700): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 17:54:11 (9700): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 17:54:11 (9700): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 17:54:14 (9700): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 17:54:14 (9700): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 17:54:14 (9700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 17:54:22 (9700): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 17:54:22 (9700): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 17:54:30 (9700): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000170 main     Log opened 2026-01-10T17:54:28.484296000Z
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000292 main     OS Product: Linux
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000327 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000353 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000406 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000407 main     Process ID: 1312
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.000407 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 17:54:30 (9700): Guest Log: 00:00:00.004516 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 17:54:30 (9700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 17:54:30 (9700): Guest Log: [INFO] Mounting shared directory
2026-01-10 17:54:30 (9700): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 17:54:40 (9700): Guest Log: 00:00:10.010015 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 926 107 000ns (GuestNow=1 768 064 079 567 494 000 ns GuestLast=1 768 067 668 493 601 000 ns fSetTimeLastLoop=true )
2026-01-10 17:55:28 (9700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 17:55:28 (9700): Guest Log: [INFO] Detected branch: prod
2026-01-10 17:55:29 (9700): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 17:55:29 (9700): Guest Log: Copying input files
2026-01-10 17:55:31 (9700): Guest Log: Copied input files into RunAtlas.
2026-01-10 17:55:31 (9700): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 17:55:31 (9700): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 17:55:31 (9700): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 17:55:31 (9700): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 17:55:39 (9700): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 17:55:39 (9700): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 17:55:39 (9700): Guest Log: 2.6.3.0 1608 0 30164 154986 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 17:55:40 (9700): Guest Log: copied the webapp to /var/www
2026-01-10 17:55:40 (9700): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-10 17:55:40 (9700): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-10 17:55:41 (9700): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 17:55:41 (9700): Guest Log:  *** Starting ATLAS job. (PandaID=6963146577 taskID=47898826) ***
2026-01-10 19:34:15 (9700): Status Report: Elapsed Time: '6000.000000'
2026-01-10 19:34:15 (9700): Status Report: CPU Time: '17957.609375'
2026-01-10 21:14:22 (9700): Status Report: Elapsed Time: '12000.000000'
2026-01-10 21:14:22 (9700): Status Report: CPU Time: '36257.625000'
2026-01-10 22:24:46 (9700): Guest Log:  *** Job finished ***
2026-01-10 22:24:46 (9700): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:25,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:25,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:40,228 | INFO     | [monitor] cgroup control has ended
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:40,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463104739136)>', '<ExcThread(monitor, started 140462501373696)>']
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:40,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:40,506 | INFO     | [monitor] control thread has ended
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,232 | INFO     | all workflow threads have been joined
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,232 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,232 | INFO     | traces error code: 0
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,333 [wrapper] ==== pilot stdout END ====
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,342 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,349 [wrapper] pilotpid: 6001
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,356 [wrapper] Pilot exit status: 0
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,430 [wrapper] pandaids: 6963146577
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,487 [wrapper] cleanup supervisor_pilot 16561 6002
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,499 [wrapper] Test setup, not cleaning
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,510 [wrapper] apfmon messages muted
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,521 [wrapper] ==== wrapper stdout END ====
2026-01-10 22:24:46 (9700): Guest Log: 2026-01-10 21:24:45,529 [wrapper] ==== wrapper stderr END ====
2026-01-10 22:24:46 (9700): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 22:24:46 (9700): Guest Log:     "exeErrorCode": 0,
2026-01-10 22:24:46 (9700): Guest Log:     "exeErrorDiag": "",
2026-01-10 22:24:46 (9700): Guest Log:     "pilotErrorCode": 0,
2026-01-10 22:24:46 (9700): Guest Log:     "pilotErrorDiag": "",
2026-01-10 22:24:46 (9700): Guest Log:  *** Listing of results directory ***
2026-01-10 22:24:46 (9700): Guest Log: total 234060
2026-01-10 22:24:46 (9700): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 15:02 pilot3.tar.gz
2026-01-10 22:24:46 (9700): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 15:03 runpilot2-wrapper.sh
2026-01-10 22:24:46 (9700): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 15:04 queuedata.json
2026-01-10 22:24:46 (9700): Guest Log: -rwxr-xr-x. 1 atlas atlas      8704 Jan 10 16:55 init_data.xml
2026-01-10 22:24:46 (9700): Guest Log: -rwxr-xr-x. 1 atlas atlas    592397 Jan 10 16:55 input.tar.gz
2026-01-10 22:24:46 (9700): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 16:55 start_atlas.sh
2026-01-10 22:24:46 (9700): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 16:55 EVNT.47898824._001061.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 22:24:46 (9700): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan 10 16:55 pandaJob.out
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas    989556 Jan 10 16:56 agis_schedconf.cvmfs.json
2026-01-10 22:24:46 (9700): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 16:56 pilot3
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas 230733882 Jan 10 21:23 HITS.47898826._026904.pool.root.1
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas      1029 Jan 10 21:23 memory_monitor_summary.json
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 21:23 agis_ddmendpoints.agis.ALL.json
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas    412834 Jan 10 21:23 log.47898826._026904.job.log.tgz.1
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas      7772 Jan 10 21:23 heartbeat.json
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 21:24 pilot_heartbeat.json
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas      4805 Jan 10 21:24 pilotlog.txt
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas   2134893 Jan 10 21:24 log.47898826._026904.job.log.1
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 21:24 output.list
2026-01-10 22:24:46 (9700): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 21:24 runtime_log
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas   2570240 Jan 10 21:24 result.tar.gz
2026-01-10 22:24:46 (9700): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Jan 10 21:24 runtime_log.err
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas       660 Jan 10 21:24 JQQODmFj6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8fkKDm7qVzUn.diag
2026-01-10 22:24:46 (9700): Guest Log: Looking for outputfile HITS.47898826._026904.pool.root.1
2026-01-10 22:24:46 (9700): Guest Log: HITS file was successfully produced
2026-01-10 22:24:46 (9700): Guest Log: -rw-------. 1 atlas atlas 230733882 Jan 10 21:23 /home/atlas/RunAtlas/HITS.47898826._026904.pool.root.1
2026-01-10 22:24:50 (9700): Guest Log: Successfully finished the ATLAS job!
2026-01-10 22:24:50 (9700): Guest Log: Copying the results back to the shared directory!
2026-01-10 22:24:50 (9700): Guest Log:  *** Contents of shared directory: ***
2026-01-10 22:24:50 (9700): Guest Log: total 448092
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root 224912005 Jan 10 16:53 ATLAS.root_0
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root 230733882 Jan 10 21:24 HITS.pool.root.1
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root      8704 Jan 10 16:53 init_data.xml
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root    592397 Jan  8 18:52 input.tar.gz
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root   2570240 Jan 10 21:24 result.tar.gz
2026-01-10 22:24:50 (9700): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 18:52 start_atlas.sh
2026-01-10 22:24:50 (9700): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 22:24:50 (9700): VM Completion File Detected.
2026-01-10 22:24:50 (9700): Powering off VM.
2026-01-10 22:24:51 (9700): Successfully stopped VM.
2026-01-10 22:24:51 (9700): Deregistering VM. (boinc_28d98dd8a6b68121, slot#1)
2026-01-10 22:24:51 (9700): Removing network bandwidth throttle group from VM.
2026-01-10 22:24:51 (9700): Removing VM from VirtualBox.
2026-01-10 22:24:56 (9700): called boinc_finish(0)

</stderr_txt>
]]>

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