Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-12 17:08:19 (324): vboxwrapper version 26210
2026-01-12 17:08:19 (324): BOINC client version: 8.2.8
2026-01-12 17:08:19 (324): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-12 17:08:20 (324): Successfully copied 'init_data.xml' to the shared directory.
2026-01-12 17:08:20 (324): Create VM. (boinc_0308544d8a8c0ece, slot#0)
2026-01-12 17:08:20 (324): Setting Memory Size for VM. (4400MB)
2026-01-12 17:08:21 (324): Setting CPU Count for VM. (4)
2026-01-12 17:08:21 (324): Setting Chipset Options for VM.
2026-01-12 17:08:21 (324): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-12 17:08:21 (324): Setting Boot Options for VM.
2026-01-12 17:08:22 (324): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-12 17:08:22 (324): Enabling VM Network Access.
2026-01-12 17:08:22 (324): Disabling USB Support for VM.
2026-01-12 17:08:23 (324): Disabling COM Port Support for VM.
2026-01-12 17:08:23 (324): Disabling LPT Port Support for VM.
2026-01-12 17:08:23 (324): Disabling Audio Support for VM.
2026-01-12 17:08:24 (324): Disabling Clipboard Support for VM.
2026-01-12 17:08:24 (324): Disabling Drag and Drop Support for VM.
2026-01-12 17:08:24 (324): Adding storage controller(s) to VM.
2026-01-12 17:08:24 (324): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-12 17:08:25 (324): Adding VirtualBox Guest Additions to VM.
2026-01-12 17:08:25 (324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-12 17:08:25 (324): forwarding host port 58354 to guest port 80
2026-01-12 17:08:26 (324): Enabling remote desktop for VM.
2026-01-12 17:08:26 (324): Required extension pack not installed, remote desktop not enabled.
2026-01-12 17:08:26 (324): Enabling shared directory for VM.
2026-01-12 17:08:26 (324): Starting VM using VBoxManage interface. (boinc_0308544d8a8c0ece, slot#0)
2026-01-12 17:08:32 (324): Successfully started VM. (PID = '15328')
2026-01-12 17:08:32 (324): Reporting VM Process ID to BOINC.
2026-01-12 17:08:32 (324): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-12 17:08:32 (324): Guest Log: CPUID EDX: 0x178bfbff
2026-01-12 17:08:32 (324): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-12 17:08:32 (324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-12 17:08:32 (324): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-12 17:08:32 (324): Detected: Web Application Enabled (http://localhost:58354)
2026-01-12 17:08:32 (324): Preference change detected
2026-01-12 17:08:32 (324): Setting CPU throttle for VM. (100%)
2026-01-12 17:08:32 (324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-12 17:08:34 (324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-12 17:08:34 (324): Guest Log: BIOS: Booting from Hard Disk...
2026-01-12 17:08:37 (324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-12 17:08:37 (324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-12 17:08:37 (324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-12 17:08:42 (324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-12 17:08:42 (324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-12 17:08:51 (324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000203 main     Log opened 2026-01-12T17:08:49.501915000Z
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000325 main     OS Product: Linux
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000359 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000430 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000468 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000468 main     Process ID: 1315
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.000469 main     Package type: LINUX_64BITS_GENERIC
2026-01-12 17:08:51 (324): Guest Log: 00:00:00.011018 main     5.2.32 r132073 started. Verbose level = 0
2026-01-12 17:08:51 (324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-12 17:08:51 (324): Guest Log: [INFO] Mounting shared directory
2026-01-12 17:08:51 (324): Guest Log: [INFO] Checking for init_data.xml
2026-01-12 17:08:56 (324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-12 17:08:56 (324): Guest Log: [INFO] Detected branch: prod
2026-01-12 17:08:56 (324): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-12 17:08:56 (324): Guest Log: Copying input files
2026-01-12 17:08:59 (324): Guest Log: Copied input files into RunAtlas.
2026-01-12 17:08:59 (324): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-12 17:08:59 (324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-12 17:08:59 (324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-12 17:08:59 (324): Guest Log: Further information can be found at the LHC@home message board.
2026-01-12 17:09:01 (324): Guest Log: 00:00:10.026193 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 016 407 000ns (GuestNow=1 768 234 140 501 723 000 ns GuestLast=1 768 237 729 518 130 000 ns fSetTimeLastLoop=true )
2026-01-12 17:09:08 (324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-12 17:09:08 (324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-12 17:09:08 (324): Guest Log: 2.6.3.0 1589 0 32220 155057 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-12 17:09:09 (324): Guest Log: copied the webapp to /var/www
2026-01-12 17:09:09 (324): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-12 17:09:09 (324): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-12 17:09:09 (324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-12 17:09:09 (324): Guest Log:  *** Starting ATLAS job. (PandaID=6963146622 taskID=47898826) ***
2026-01-12 18:48:38 (324): Status Report: Elapsed Time: '6000.000000'
2026-01-12 18:48:38 (324): Status Report: CPU Time: '14240.578125'
2026-01-12 20:28:45 (324): Status Report: Elapsed Time: '12000.000000'
2026-01-12 20:28:45 (324): Status Report: CPU Time: '30108.093750'
2026-01-12 22:08:51 (324): Status Report: Elapsed Time: '18000.000000'
2026-01-12 22:08:51 (324): Status Report: CPU Time: '46883.343750'
2026-01-12 22:18:57 (324): Guest Log:  *** Job finished ***
2026-01-12 22:18:57 (324): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:20,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:20,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:48,824 | INFO     | [monitor] cgroup control has ended
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:49,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917765175104)>', '<ExcThread(monitor, started 139916780484352)>']
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:49,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:49,438 | INFO     | [monitor] control thread has ended
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,112 | INFO     | all workflow threads have been joined
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,112 | INFO     | end of generic workflow (traces error code: 0)
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,112 | INFO     | traces error code: 0
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,228 [wrapper] ==== pilot stdout END ====
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,250 [wrapper] ==== wrapper stdout RESUME ====
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,273 [wrapper] pilotpid: 6003
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,299 [wrapper] Pilot exit status: 0
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,566 [wrapper] pandaids: 6963146622
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,655 [wrapper] cleanup supervisor_pilot 19771 6004
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,673 [wrapper] Test setup, not cleaning
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,692 [wrapper] apfmon messages muted
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,708 [wrapper] ==== wrapper stdout END ====
2026-01-12 22:18:57 (324): Guest Log: 2026-01-12 21:18:54,725 [wrapper] ==== wrapper stderr END ====
2026-01-12 22:18:57 (324): Guest Log:  *** Error codes and diagnostics ***
2026-01-12 22:18:57 (324): Guest Log:     "exeErrorCode": 0,
2026-01-12 22:18:57 (324): Guest Log:     "exeErrorDiag": "",
2026-01-12 22:18:57 (324): Guest Log:     "pilotErrorCode": 0,
2026-01-12 22:18:57 (324): Guest Log:     "pilotErrorDiag": "",
2026-01-12 22:18:57 (324): Guest Log:  *** Listing of results directory ***
2026-01-12 22:18:57 (324): Guest Log: total 225124
2026-01-12 22:18:57 (324): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 15:02 pilot3.tar.gz
2026-01-12 22:18:57 (324): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 15:03 runpilot2-wrapper.sh
2026-01-12 22:18:57 (324): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 15:04 queuedata.json
2026-01-12 22:18:57 (324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8705 Jan 12 16:08 init_data.xml
2026-01-12 22:18:57 (324): Guest Log: -rwxr-xr-x. 1 atlas atlas    592394 Jan 12 16:08 input.tar.gz
2026-01-12 22:18:57 (324): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 12 16:08 start_atlas.sh
2026-01-12 22:18:57 (324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 12 16:08 EVNT.47898824._001063.pool.root.1 -> /data/./ATLAS.root_0
2026-01-12 22:18:57 (324): Guest Log: -rw-r--r--. 1 atlas atlas      2517 Jan 12 16:09 pandaJob.out
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas    989657 Jan 12 16:10 agis_schedconf.cvmfs.json
2026-01-12 22:18:57 (324): Guest Log: drwx------. 5 atlas atlas      4096 Jan 12 16:10 pilot3
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas 220960621 Jan 12 21:16 HITS.47898826._026949.pool.root.1
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 12 21:17 memory_monitor_summary.json
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 12 21:17 agis_ddmendpoints.agis.ALL.json
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas    435539 Jan 12 21:17 log.47898826._026949.job.log.tgz.1
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas      7782 Jan 12 21:17 heartbeat.json
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas        95 Jan 12 21:18 pilot_heartbeat.json
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas      4805 Jan 12 21:18 pilotlog.txt
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas   2425297 Jan 12 21:18 log.47898826._026949.job.log.1
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas       357 Jan 12 21:18 output.list
2026-01-12 22:18:57 (324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 12 21:18 runtime_log
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas   2877440 Jan 12 21:18 result.tar.gz
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas       660 Jan 12 21:18 TOkKDmGj6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbgkKDmQgfihm.diag
2026-01-12 22:18:57 (324): Guest Log: -rw-r--r--. 1 atlas atlas      8743 Jan 12 21:18 runtime_log.err
2026-01-12 22:18:57 (324): Guest Log: Looking for outputfile HITS.47898826._026949.pool.root.1
2026-01-12 22:18:57 (324): Guest Log: HITS file was successfully produced
2026-01-12 22:18:57 (324): Guest Log: -rw-------. 1 atlas atlas 220960621 Jan 12 21:16 /home/atlas/RunAtlas/HITS.47898826._026949.pool.root.1
2026-01-12 22:19:00 (324): Guest Log: Successfully finished the ATLAS job!
2026-01-12 22:19:00 (324): Guest Log: Copying the results back to the shared directory!
2026-01-12 22:19:00 (324): Guest Log:  *** Contents of shared directory: ***
2026-01-12 22:19:00 (324): Guest Log: total 436164
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root 222164112 Jan 12 16:08 ATLAS.root_0
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root 220960621 Jan 12 21:18 HITS.pool.root.1
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root      8705 Jan 12 16:08 init_data.xml
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root    592394 Jan  8 18:56 input.tar.gz
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root   2877440 Jan 12 21:18 result.tar.gz
2026-01-12 22:19:00 (324): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 18:56 start_atlas.sh
2026-01-12 22:19:00 (324): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-12 22:19:00 (324): VM Completion File Detected.
2026-01-12 22:19:00 (324): Powering off VM.
2026-01-12 22:19:00 (324): Successfully stopped VM.
2026-01-12 22:19:00 (324): Deregistering VM. (boinc_0308544d8a8c0ece, slot#0)
2026-01-12 22:19:00 (324): Removing network bandwidth throttle group from VM.
2026-01-12 22:19:00 (324): Removing VM from VirtualBox.
2026-01-12 22:19:06 (324): called boinc_finish(0)

</stderr_txt>
]]>

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