Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 12:45:32 (9448): vboxwrapper version 26210
2026-01-08 12:45:32 (9448): BOINC client version: 8.2.8
2026-01-08 12:45:32 (9448): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-08 12:45:32 (9448): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 12:45:33 (9448): Create VM. (boinc_3f888921f4ddc04b, slot#3)
2026-01-08 12:45:33 (9448): Setting Memory Size for VM. (4400MB)
2026-01-08 12:45:33 (9448): Setting CPU Count for VM. (4)
2026-01-08 12:45:34 (9448): Setting Chipset Options for VM.
2026-01-08 12:45:34 (9448): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 12:45:34 (9448): Setting Boot Options for VM.
2026-01-08 12:45:35 (9448): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 12:45:35 (9448): Enabling VM Network Access.
2026-01-08 12:45:35 (9448): Disabling USB Support for VM.
2026-01-08 12:45:36 (9448): Disabling COM Port Support for VM.
2026-01-08 12:45:36 (9448): Disabling LPT Port Support for VM.
2026-01-08 12:45:36 (9448): Disabling Audio Support for VM.
2026-01-08 12:45:36 (9448): Disabling Clipboard Support for VM.
2026-01-08 12:45:37 (9448): Disabling Drag and Drop Support for VM.
2026-01-08 12:45:37 (9448): Adding storage controller(s) to VM.
2026-01-08 12:45:37 (9448): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 12:45:38 (9448): Adding VirtualBox Guest Additions to VM.
2026-01-08 12:45:38 (9448): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 12:45:38 (9448): forwarding host port 52194 to guest port 80
2026-01-08 12:45:38 (9448): Enabling remote desktop for VM.
2026-01-08 12:45:39 (9448): Required extension pack not installed, remote desktop not enabled.
2026-01-08 12:45:39 (9448): Enabling shared directory for VM.
2026-01-08 12:45:39 (9448): Starting VM using VBoxManage interface. (boinc_3f888921f4ddc04b, slot#3)
2026-01-08 12:45:45 (9448): Successfully started VM. (PID = '9956')
2026-01-08 12:45:45 (9448): Reporting VM Process ID to BOINC.
2026-01-08 12:45:45 (9448): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-08 12:45:45 (9448): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 12:45:45 (9448): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 12:45:45 (9448): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 12:45:45 (9448): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 12:45:45 (9448): Detected: Web Application Enabled (http://localhost:52194)
2026-01-08 12:45:45 (9448): Preference change detected
2026-01-08 12:45:45 (9448): Setting CPU throttle for VM. (100%)
2026-01-08 12:45:46 (9448): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 12:45:47 (9448): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 12:45:47 (9448): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 12:45:50 (9448): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 12:45:50 (9448): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 12:45:50 (9448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 12:46:07 (9448): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 12:46:07 (9448): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-08 12:46:15 (9448): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000198 main     Log opened 2026-01-08T12:46:12.700784000Z
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000332 main     OS Product: Linux
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000383 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000433 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000490 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000491 main     Process ID: 1309
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.000492 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 12:46:15 (9448): Guest Log: 00:00:00.001494 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 12:46:15 (9448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 12:46:15 (9448): Guest Log: [INFO] Mounting shared directory
2026-01-08 12:46:15 (9448): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 12:46:19 (9448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 12:46:19 (9448): Guest Log: [INFO] Detected branch: prod
2026-01-08 12:46:19 (9448): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 12:46:19 (9448): Guest Log: Copying input files
2026-01-08 12:46:21 (9448): Guest Log: Copied input files into RunAtlas.
2026-01-08 12:46:21 (9448): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 12:46:21 (9448): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 12:46:21 (9448): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 12:46:21 (9448): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 12:46:25 (9448): Guest Log: 00:00:10.003708 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 596 417 402 000ns (GuestNow=1 767 897 969 120 811 000 ns GuestLast=1 767 876 372 703 409 000 ns fSetTimeLastLoop=true )
2026-01-08 12:46:30 (9448): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 12:46:31 (9448): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 12:46:31 (9448): Guest Log: 2.6.3.0 1587 0 30148 154916 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 12:46:32 (9448): Guest Log: copied the webapp to /var/www
2026-01-08 12:46:32 (9448): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-08 12:46:32 (9448): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-08 12:46:32 (9448): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 12:46:32 (9448): Guest Log:  *** Starting ATLAS job. (PandaID=6963146410 taskID=47898826) ***
2026-01-08 14:25:48 (9448): Status Report: Elapsed Time: '6000.000000'
2026-01-08 14:25:48 (9448): Status Report: CPU Time: '21858.406250'
2026-01-08 16:05:51 (9448): Status Report: Elapsed Time: '12000.000000'
2026-01-08 16:05:51 (9448): Status Report: CPU Time: '45614.968750'
2026-01-08 16:52:34 (9448): Guest Log:  *** Job finished ***
2026-01-08 16:52:34 (9448): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:51:59,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:51:59,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:08,820 | INFO     | [monitor] cgroup control has ended
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:09,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211755947840)>', '<ExcThread(monitor, started 140210776024832)>']
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:09,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:09,867 | INFO     | [monitor] control thread has ended
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,289 | INFO     | all workflow threads have been joined
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,289 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,290 | INFO     | traces error code: 0
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,375 [wrapper] ==== pilot stdout END ====
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,382 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,388 [wrapper] pilotpid: 6005
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,396 [wrapper] Pilot exit status: 0
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,516 [wrapper] pandaids: 6963146410
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,559 [wrapper] cleanup supervisor_pilot 16779 6006
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,565 [wrapper] Test setup, not cleaning
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,574 [wrapper] apfmon messages muted
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,580 [wrapper] ==== wrapper stdout END ====
2026-01-08 16:52:34 (9448): Guest Log: 2026-01-08 22:52:14,586 [wrapper] ==== wrapper stderr END ====
2026-01-08 16:52:34 (9448): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 16:52:34 (9448): Guest Log:     "exeErrorCode": 0,
2026-01-08 16:52:34 (9448): Guest Log:     "exeErrorDiag": "",
2026-01-08 16:52:34 (9448): Guest Log:     "pilotErrorCode": 0,
2026-01-08 16:52:34 (9448): Guest Log:     "pilotErrorDiag": "",
2026-01-08 16:52:34 (9448): Guest Log:  *** Listing of results directory ***
2026-01-08 16:52:34 (9448): Guest Log: total 223588
2026-01-08 16:52:34 (9448): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 15:02 pilot3.tar.gz
2026-01-08 16:52:34 (9448): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 15:03 runpilot2-wrapper.sh
2026-01-08 16:52:34 (9448): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 15:04 queuedata.json
2026-01-08 16:52:34 (9448): Guest Log: -rwxr-xr-x. 1 atlas atlas      8682 Jan  8 18:46 init_data.xml
2026-01-08 16:52:34 (9448): Guest Log: -rwxr-xr-x. 1 atlas atlas    592394 Jan  8 18:46 input.tar.gz
2026-01-08 16:52:34 (9448): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 18:46 start_atlas.sh
2026-01-08 16:52:34 (9448): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 18:46 EVNT.47898824._001056.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 16:52:34 (9448): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan  8 18:46 pandaJob.out
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas    989829 Jan  8 18:47 agis_schedconf.cvmfs.json
2026-01-08 16:52:34 (9448): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 18:47 pilot3
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas 220395752 Jan  8 22:50 HITS.47898826._026790.pool.root.1
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas      1030 Jan  8 22:51 memory_monitor_summary.json
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  8 22:51 agis_ddmendpoints.agis.ALL.json
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas    408803 Jan  8 22:51 log.47898826._026790.job.log.tgz.1
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas        95 Jan  8 22:51 pilot_heartbeat.json
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas      7811 Jan  8 22:51 heartbeat.json
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas      5063 Jan  8 22:52 pilotlog.txt
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas   1952430 Jan  8 22:52 log.47898826._026790.job.log.1
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas       357 Jan  8 22:52 output.list
2026-01-08 16:52:34 (9448): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  8 22:52 runtime_log
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas   2375680 Jan  8 22:52 result.tar.gz
2026-01-08 16:52:34 (9448): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Jan  8 22:52 runtime_log.err
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas       661 Jan  8 22:52 3KjLDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRTfKDmSaw0Un.diag
2026-01-08 16:52:34 (9448): Guest Log: Looking for outputfile HITS.47898826._026790.pool.root.1
2026-01-08 16:52:34 (9448): Guest Log: HITS file was successfully produced
2026-01-08 16:52:34 (9448): Guest Log: -rw-------. 1 atlas atlas 220395752 Jan  8 22:50 /home/atlas/RunAtlas/HITS.47898826._026790.pool.root.1
2026-01-08 16:52:35 (9448): Guest Log: Successfully finished the ATLAS job!
2026-01-08 16:52:35 (9448): Guest Log: Copying the results back to the shared directory!
2026-01-08 16:52:35 (9448): Guest Log:  *** Contents of shared directory: ***
2026-01-08 16:52:35 (9448): Guest Log: total 435900
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root 222964271 Jan  8 18:45 ATLAS.root_0
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root 220395752 Jan  8  2026 HITS.pool.root.1
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root      8682 Jan  8 18:45 init_data.xml
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root    592394 Jan  8 18:43 input.tar.gz
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root   2375680 Jan  8  2026 result.tar.gz
2026-01-08 16:52:35 (9448): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 18:44 start_atlas.sh
2026-01-08 16:52:35 (9448): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 16:52:35 (9448): VM Completion File Detected.
2026-01-08 16:52:35 (9448): Powering off VM.
2026-01-08 16:52:36 (9448): Successfully stopped VM.
2026-01-08 16:52:36 (9448): Deregistering VM. (boinc_3f888921f4ddc04b, slot#3)
2026-01-08 16:52:36 (9448): Removing network bandwidth throttle group from VM.
2026-01-08 16:52:36 (9448): Removing VM from VirtualBox.
2026-01-08 16:52:42 (9448): called boinc_finish(0)

</stderr_txt>
]]>

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