Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:00:38 (3651993): wrapper (7.7.26015): starting
15:00:38 (3651993): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 15:00:38] Arguments: --nthreads 8
[2026-01-08 15:00:38] Threads: 8
[2026-01-08 15:00:38] Checking for CVMFS
[2026-01-08 15:00:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 15:00:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 15:00:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 15:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 15:00:41] 2.13.3.0 7976 20523 211676 154918 3 344 35386931 40960001 9027 16776704 0 10999326 99.953 11388850 29523 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 15:00:41] CVMFS is ok
[2026-01-08 15:00:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 15:00:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 15:00:42] Further information can be found at the LHC@home message board.
[2026-01-08 15:00:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 15:00:42] Checking for apptainer binary...
[2026-01-08 15:00:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 15:00:42] Running /usr/bin/apptainer --version
[2026-01-08 15:00:42] apptainer version 1.4.5-2.el9
[2026-01-08 15:00:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 15:00:44] c-211-13.aglt2.org
[2026-01-08 15:00:44] apptainer works
[2026-01-08 15:00:44] Set ATHENA_PROC_NUMBER=8
[2026-01-08 15:00:44] Set ATHENA_CORE_NUMBER=8
[2026-01-08 15:00:44] Starting ATLAS job with PandaID=6963146389
[2026-01-08 15:00:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:31:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:31:48] 2026-01-09 06:42:15,920 | INFO     | time since job start (38388s) is within the limit (349056.0s)
[2026-01-09 02:31:48] 2026-01-09 06:42:15,920 | INFO     | 38394s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 02:31:48] 2026-01-09 06:42:16,530 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:31:48] 2026-01-09 06:42:16,628 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2688.158979166667
[2026-01-09 02:31:48] 2026-01-09 06:42:16,758 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963146389/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:31:48] 2026-01-09 06:42:16,759 | INFO     | extracted standard info from prmon json
[2026-01-09 02:31:48] 2026-01-09 06:42:16,759 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:31:48] 2026-01-09 06:42:16,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:31:48] 2026-01-09 06:42:16,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:31:48] 2026-01-09 06:42:16,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:31:48] 2026-01-09 06:42:16,967 | INFO     | monitor loop #2188: job 0:6963146389 is in state 'finished'
[2026-01-09 02:31:48] 2026-01-09 06:42:16,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,026 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:31:48] 2026-01-09 06:42:17,027 | INFO     | sum of square deviations: 76069832282.21083
[2026-01-09 02:31:48] 2026-01-09 06:42:17,184 | INFO     | sum of deviations: 180939110855.45038
[2026-01-09 02:31:48] 2026-01-09 06:42:17,185 | INFO     | mean x: 1767921814.6709266
[2026-01-09 02:31:48] 2026-01-09 06:42:17,245 | INFO     | mean y: 2510209.2060702876
[2026-01-09 02:31:48] 2026-01-09 06:42:17,246 | INFO     | intersect: -4202654855.727538
[2026-01-09 02:31:48] 2026-01-09 06:42:17,247 | INFO     | chi2: 4.068632494221503
[2026-01-09 02:31:48] 2026-01-09 06:42:17,248 | INFO     | sum of square deviations: 74261597591.24635
[2026-01-09 02:31:48] 2026-01-09 06:42:17,461 | INFO     | sum of deviations: 218484477579.25623
[2026-01-09 02:31:48] 2026-01-09 06:42:17,461 | INFO     | mean x: 1767921662.1690822
[2026-01-09 02:31:48] 2026-01-09 06:42:17,462 | INFO     | mean y: 2513354.6070853462
[2026-01-09 02:31:48] 2026-01-09 06:42:17,462 | INFO     | intersect: -5198875428.948972
[2026-01-09 02:31:48] 2026-01-09 06:42:17,463 | INFO     | chi2: 3.389775331050157
[2026-01-09 02:31:48] 2026-01-09 06:42:17,463 | INFO     | current chi2=3.389775331050157 (change=16.685143328513856 %)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,463 | INFO     | right removable region: 620
[2026-01-09 02:31:48] 2026-01-09 06:42:17,464 | INFO     | sum of square deviations: 74261454611.15936
[2026-01-09 02:31:48] 2026-01-09 06:42:17,475 | INFO     | sum of deviations: 6199975673.565231
[2026-01-09 02:31:48] 2026-01-09 06:42:17,475 | INFO     | mean x: 1767921967.178744
[2026-01-09 02:31:48] 2026-01-09 06:42:17,476 | INFO     | mean y: 2524929.724637681
[2026-01-09 02:31:48] 2026-01-09 06:42:17,476 | INFO     | intersect: -145076181.06242016
[2026-01-09 02:31:48] 2026-01-09 06:42:17,477 | INFO     | chi2: 1.1974300124705242
[2026-01-09 02:31:48] 2026-01-09 06:42:17,477 | INFO     | current chi2=1.1974300124705242 (change=70.56922653566818 %)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,478 | INFO     | sum of square deviations: 72482037211.27086
[2026-01-09 02:31:48] 2026-01-09 06:42:17,489 | INFO     | sum of deviations: -38817870940.261375
[2026-01-09 02:31:48] 2026-01-09 06:42:17,489 | INFO     | mean x: 1767922119.6834416
[2026-01-09 02:31:48] 2026-01-09 06:42:17,489 | INFO     | mean y: 2528779.6704545454
[2026-01-09 02:31:48] 2026-01-09 06:42:17,489 | INFO     | intersect: 949342298.091178
[2026-01-09 02:31:48] 2026-01-09 06:42:17,490 | INFO     | chi2: 0.9577103963830128
[2026-01-09 02:31:48] 2026-01-09 06:42:17,491 | INFO     | current chi2=0.9577103963830128 (change=20.019509582269826 %)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,491 | INFO     | left removable region: 20
[2026-01-09 02:31:48] 2026-01-09 06:42:17,492 | INFO     | sum of square deviations: 66979322841.958015
[2026-01-09 02:31:48] 2026-01-09 06:42:17,502 | INFO     | sum of deviations: -52684758252.43329
[2026-01-09 02:31:48] 2026-01-09 06:42:17,502 | INFO     | mean x: 1767922241.6916666
[2026-01-09 02:31:48] 2026-01-09 06:42:17,502 | INFO     | mean y: 2536810.6733333333
[2026-01-09 02:31:48] 2026-01-09 06:42:17,502 | INFO     | intersect: 1393153376.5111399
[2026-01-09 02:31:48] 2026-01-09 06:42:17,503 | INFO     | chi2: 0.06577113507024483
[2026-01-09 02:31:48] 2026-01-09 06:42:17,504 | INFO     | current memory leak: -0.79 B/s (using 600 data points, chi2=0.07)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | could have reported an average CPU frequency of 2709 MHz (24 samples)
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | ..............................
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | . Timing measurements:
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | . get job = 0 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | . initial setup = 6 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,505 | INFO     | . payload setup = 62 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,506 | INFO     | . stage-in = 0 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,506 | INFO     | . payload execution = 38171 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,506 | INFO     | . stage-out = 6 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,506 | INFO     | . log creation = 1 s
[2026-01-09 02:31:48] 2026-01-09 06:42:17,506 | INFO     | ..............................
[2026-01-09 02:31:48] 2026-01-09 06:42:17,990 | INFO     | time since job start (38390s) is within the limit (349056.0s)
[2026-01-09 02:31:48] 2026-01-09 06:42:18,451 | INFO     | 
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | job summary report
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | --------------------------------------------------
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | PanDA job id: 6963146389
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | task id: 47898826
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | errors: (none)
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | pilot state: finished 
[2026-01-09 02:31:48] 2026-01-09 06:42:18,452 | INFO     | transexitcode: 0
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | exeerrorcode: 0
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | exeerrordiag: 
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | exitcode: 0
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | exitmsg: OK
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | cpuconsumptiontime: 75705 s
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | nevents: 400
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | neventsw: 0
[2026-01-09 02:31:48] 2026-01-09 06:42:18,453 | INFO     | pid: 3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | pgrp: 3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | corecount: 8
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | event service: False
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | sizes: {0: 2283797, 1: 2283996, 2: 2283996, 14: 2284024, 26: 2284052, 37: 2284080, 46: 2284498, 49: 2284526, 38242: 2326112, 38250: 2335110, 38252: 2335166, 38290:
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | --------------------------------------------------
[2026-01-09 02:31:48] 2026-01-09 06:42:18,454 | INFO     | 
[2026-01-09 02:31:48] 2026-01-09 06:42:18,504 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 02:31:48] 2026-01-09 06:42:18,909 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,911 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | job 6963146389 has completed (purged errors)
[2026-01-09 02:31:48] 2026-01-09 06:42:18,960 | INFO     | overall cleanup function is called
[2026-01-09 02:31:48] 2026-01-09 06:42:20,130 | INFO     | --- collectZombieJob: --- 10, [3667800]
[2026-01-09 02:31:48] 2026-01-09 06:42:20,133 | INFO     | zombie collector waiting for pid 3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:20,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:31:48] 2026-01-09 06:42:20,134 | INFO     | collected zombie processes
[2026-01-09 02:31:48] 2026-01-09 06:42:20,134 | INFO     | will attempt to kill all subprocesses of pid=3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:25,613 | INFO     | PID=3657950 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 02:31:48] 2026-01-09 06:42:25,613 | INFO     | .. there are 12 such processes running
[2026-01-09 02:31:48] 2026-01-09 06:42:25,987 | INFO     | process IDs to be killed: [3667800] (in reverse order)
[2026-01-09 02:31:48] 2026-01-09 06:42:26,434 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:31:48] 2026-01-09 06:42:26,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:31:48] 2026-01-09 06:42:26,459 | INFO     | did not find any defunct processes belonging to 3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:26,485 | INFO     | did not find any defunct processes belonging to 3667800
[2026-01-09 02:31:48] 2026-01-09 06:42:26,485 | INFO     | ready for new job
[2026-01-09 02:31:48] 2026-01-09 06:42:26,485 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:31:48] 2026-01-09 06:42:26,492 | INFO     | ***************************************
[2026-01-09 02:31:48] 2026-01-09 06:42:26,493 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:31:48] 2026-01-09 06:42:26,493 | INFO     | ***************************************
[2026-01-09 02:31:48] 2026-01-09 06:42:26,493 | INFO     | 
[2026-01-09 02:31:48] 2026-01-09 06:42:26,500 | INFO     | architecture information:
[2026-01-09 02:31:48] 2026-01-09 06:42:26,501 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:31:48] 2026-01-09 06:42:26,546 | INFO     | cat /etc/os-release:
[2026-01-09 02:31:48] NAME="CentOS Linux"
[2026-01-09 02:31:48] VERSION="7 (Core)"
[2026-01-09 02:31:48] ID="centos"
[2026-01-09 02:31:48] ID_LIKE="rhel fedora"
[2026-01-09 02:31:48] VERSION_ID="7"
[2026-01-09 02:31:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:31:48] ANSI_COLOR="0;31"
[2026-01-09 02:31:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:31:48] HOME_URL="https://www.centos.org/"
[2026-01-09 02:31:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:31:48] 
[2026-01-09 02:31:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:31:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:31:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:31:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:31:48] 
[2026-01-09 02:31:48] 2026-01-09 06:42:26,547 | INFO     | ***************************************
[2026-01-09 02:31:48] 2026-01-09 06:42:27,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 02:31:48] 2026-01-09 06:42:27,239 | INFO     | sufficient remaining disk space (61389930496 B)
[2026-01-09 02:31:48] 2026-01-09 06:42:27,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:31:48] 2026-01-09 06:42:27,239 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:31:48] 2026-01-09 06:42:27,239 | INFO     | update_server=False
[2026-01-09 02:31:48] 2026-01-09 06:42:27,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:31:48] 2026-01-09 06:42:27,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 02:31:48] 2026-01-09 06:42:27,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 02:31:48] 2026-01-09 06:42:27,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:31:48] 2026-01-09 06:42:27,338 | INFO     | will abort loop
[2026-01-09 02:31:48] 2026-01-09 06:42:27,469 | INFO     | all payload control threads have been joined
[2026-01-09 02:31:48] 2026-01-09 06:42:27,528 | INFO     | all data control threads have been joined
[2026-01-09 02:31:48] 2026-01-09 06:42:27,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:31:48] 2026-01-09 06:42:27,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:31:48] 2026-01-09 06:42:28,197 | INFO     | all job control threads have been joined
[2026-01-09 02:31:48] 2026-01-09 06:42:28,245 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,284 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,345 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,396 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,404 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,489 | INFO     | [payload] control thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,572 | INFO     | [data] control thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:28,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:31:48] 2026-01-09 06:42:28,668 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,217 | INFO     | [job] control thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,317 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,678 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,701 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,702 | INFO     | [job] validate thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:29,996 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:32,669 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:31:48] 2026-01-09 06:42:39,088 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:31:48] 2026-01-09 06:42:41,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473858971456)>', '<ExcThread(monitor, started 140473381402368)>']
[2026-01-09 02:31:48] 2026-01-09 06:42:46,080 | INFO     | all workflow threads have been joined
[2026-01-09 02:31:48] 2026-01-09 06:42:46,080 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:31:48] 2026-01-09 06:42:46,081 | INFO     | traces error code: 0
[2026-01-09 02:31:48] 2026-01-09 06:42:46,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:31:48] 2026-01-09 06:43:04,663 | INFO     | PID=3657950 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 02:31:48] 2026-01-09 06:43:04,663 | INFO     | .. there are 12 such processes running
[2026-01-09 02:31:48] 2026-01-09 06:43:04,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:31:48] 2026-01-09 06:43:04,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:31:48] 2026-01-09 06:43:04,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:31:48] 2026-01-09 06:43:04,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:31:48] 2026-01-09 06:43:04,665 | INFO     | [monitor] control thread has ended
[2026-01-09 02:31:48] 2026-01-09 06:43:07,708 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:31:48] 2026-01-09 06:43:07,719 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:31:48] 2026-01-09 06:43:07,730 [wrapper] pilotpid: 3657950
[2026-01-09 02:31:48] 2026-01-09 06:43:07,733 [wrapper] Pilot exit status: 0
[2026-01-09 02:31:48] 2026-01-09 06:43:07,759 [wrapper] pandaids: 6963146389
[2026-01-09 02:31:48] 2026-01-09 06:43:07,849 [wrapper] cleanup supervisor_pilot  492207 3657951
[2026-01-09 02:31:48] 2026-01-09 06:43:07,853 [wrapper] Test setup, not cleaning
[2026-01-09 02:31:48] 2026-01-09 06:43:07,856 [wrapper] apfmon messages muted
[2026-01-09 02:31:48] 2026-01-09 06:43:07,859 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:31:48] 2026-01-09 06:43:07,862 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:31:48]  *** Error codes and diagnostics ***
[2026-01-09 02:31:48]     "exeErrorCode": 0,
[2026-01-09 02:31:48]     "exeErrorDiag": "",
[2026-01-09 02:31:48]     "pilotErrorCode": 0,
[2026-01-09 02:31:48]     "pilotErrorDiag": "",
[2026-01-09 02:31:48]  *** Listing of results directory ***
[2026-01-09 02:31:48] total 448356
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 02:31:48] -rwx------. 1 boincer umatlas     36322 Jan  8 10:03 runpilot2-wrapper.sh
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:04 queuedata.json
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas       100 Jan  8 15:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:31:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 15:00 run_atlas
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas       105 Jan  8 15:00 job.xml
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas 226962225 Jan  8 15:00 EVNT.47898824._001055.pool.root.1
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:00 start_atlas.sh
[2026-01-09 02:31:48] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 15:00 shared
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas    592391 Jan  8 15:00 input.tar.gz
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas         0 Jan  8 15:00 boinc_lockfile
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 15:00 pandaJob.out
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas        57 Jan  8 15:00 setup.sh.local
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas    989845 Jan  8 15:02 agis_schedconf.cvmfs.json
[2026-01-09 02:31:48] drwx------. 5 boincer umatlas      4096 Jan  8 15:02 pilot3
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas 217511044 Jan  9 01:40 HITS.47898826._026769.pool.root.1
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas       531 Jan  9 01:40 boinc_task_state.xml
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas      1039 Jan  9 01:41 memory_monitor_summary.json
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas   1516240 Jan  9 01:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas    766968 Jan  9 01:41 log.47898826._026769.job.log.tgz.1
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas      7821 Jan  9 01:42 heartbeat.json
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas       823 Jan  9 01:43 pilotlog.txt
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas        95 Jan  9 01:43 pilot_heartbeat.json
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas   4598285 Jan  9 01:43 log.47898826._026769.job.log.1
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas       357 Jan  9 01:43 output.list
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas       620 Jan  9 01:43 runtime_log
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas   5386240 Jan  9 01:43 result.tar.gz
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 01:43 runtime_log.err
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas       659 Jan  9 01:43 13SLDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFTfKDmQyh9Tn.diag
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas      6614 Jan  9 02:31 init_data.xml
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 02:31 boinc_mmap_file
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas        28 Jan  9 02:31 wrapper_checkpoint.txt
[2026-01-09 02:31:48] -rw-r--r--. 1 boincer umatlas     21509 Jan  9 02:31 stderr.txt
[2026-01-09 02:31:48] HITS file was successfully produced:
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas 217511044 Jan  9 01:40 shared/HITS.pool.root.1
[2026-01-09 02:31:48]  *** Contents of shared directory: ***
[2026-01-09 02:31:48] total 439920
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas 226962225 Jan  8 15:00 ATLAS.root_0
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 15:00 start_atlas.sh
[2026-01-09 02:31:48] -rw-r--r--. 2 boincer umatlas    592391 Jan  8 15:00 input.tar.gz
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas 217511044 Jan  9 01:40 HITS.pool.root.1
[2026-01-09 02:31:48] -rw-------. 1 boincer umatlas   5386240 Jan  9 01:43 result.tar.gz
02:31:50 (3651993): run_atlas exited; CPU time 76706.917121
02:31:50 (3651993): called boinc_finish(0)

</stderr_txt>
]]>

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