Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:10 (301337): wrapper (7.7.26015): starting
10:57:10 (301337): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 10:57:10] Arguments: --nthreads 12
[2026-01-08 10:57:10] Threads: 12
[2026-01-08 10:57:10] Checking for CVMFS
[2026-01-08 10:57:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 10:57:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 10:57:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 10:57:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 10:57:10] 2.11.5.0 1657931 90595 145580 154916 0 398 42759564 45568000 13742 130560 0 723555574 99.783 456681503 24338 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-08 10:57:10] CVMFS is ok
[2026-01-08 10:57:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 10:57:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 10:57:10] Further information can be found at the LHC@home message board.
[2026-01-08 10:57:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 10:57:10] Checking for apptainer binary...
[2026-01-08 10:57:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 10:57:10] Running /usr/bin/apptainer --version
[2026-01-08 10:57:10] apptainer version 1.4.1-1.el9
[2026-01-08 10:57:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 10:57:10] wns0039.triumf.lcg
[2026-01-08 10:57:10] apptainer works
[2026-01-08 10:57:10] Set ATHENA_PROC_NUMBER=12
[2026-01-08 10:57:10] Set ATHENA_CORE_NUMBER=12
[2026-01-08 10:57:10] Starting ATLAS job with PandaID=6963146374
[2026-01-08 10:57:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:00:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | found no stored workdir sizes
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | wrong length of table data, x=[1767898662.0], y=[1157.0] (must be same and length>=4)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . Timing measurements:
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . get job = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . initial setup = 2 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload setup = 4 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-in = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload execution = 14 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-out = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . log creation = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963146374/pilotlog.txt
[2026-01-08 11:00:29] 2026-01-08 18:59:56,925 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 11:00:29] - Log from pilotlog.txt -
[2026-01-08 11:00:29] 2026-01-08 18:59:56,914 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:00:29] 2026-01-08 18:59:56,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | found no stored workdir sizes
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | wrong length of table data, x=[1767898662.0], y=[1157.0] (must be same and length>=4)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . Timing measurements:
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . get job = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . initial setup = 2 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload setup = 4 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-in = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload execution = 14 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-out = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . log creation = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963146374/pilotlog.txt
[2026-01-08 11:00:29] 2026-01-08 18:59:56,926 | WARNING  | 
[2026-01-08 11:00:29] [begin log extracts]
[2026-01-08 11:00:29] - Log from pilotlog.txt -
[2026-01-08 11:00:29] 2026-01-08 18:59:56,914 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:00:29] 2026-01-08 18:59:56,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | found no stored workdir sizes
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | WARNING  | wrong length of table data, x=[1767898662.0], y=[1157.0] (must be same and length>=4)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,915 | INFO     | could have reported an average CPU frequency of 2766 MHz (4 samples)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . Timing measurements:
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . get job = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . initial setup = 2 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload setup = 4 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-in = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . payload execution = 14 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . stage-out = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | . log creation = 0 s
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | ..............................
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 11:00:29] 2026-01-08 18:59:56,916 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963146374/pilotlog.txt
[2026-01-08 11:00:29] [end log extracts]
[2026-01-08 11:00:29] 2026-01-08 18:59:56,926 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 11:00:29] 2026-01-08 18:59:56,926 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | 
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | job summary report
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | --------------------------------------------------
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | PanDA job id: 6963146374
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | task id: 47898826
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 10:57:48,665 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | pilot state: failed 
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | transexitcode: 65
[2026-01-08 11:00:29] 2026-01-08 18:59:57,120 | INFO     | exeerrorcode: 65
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | exitcode: 65
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | nevents: 0
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | neventsw: 0
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | pid: 311561
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | pgrp: 311561
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | corecount: 12
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | event service: False
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | sizes: {0: 2283794, 1: 2283993, 4: 2284255, 11: 2284283, 22: 2311670, 23: 2311670, 143: 2311964}
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | --------------------------------------------------
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | 
[2026-01-08 11:00:29] 2026-01-08 18:59:57,121 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | job 6963146374 has completed (purged errors)
[2026-01-08 11:00:29] 2026-01-08 18:59:57,137 | INFO     | overall cleanup function is called
[2026-01-08 11:00:29] 2026-01-08 18:59:58,143 | INFO     | --- collectZombieJob: --- 10, [311561]
[2026-01-08 11:00:29] 2026-01-08 18:59:58,143 | INFO     | zombie collector waiting for pid 311561
[2026-01-08 11:00:29] 2026-01-08 18:59:58,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:00:29] 2026-01-08 18:59:58,144 | INFO     | collected zombie processes
[2026-01-08 11:00:29] 2026-01-08 18:59:58,144 | INFO     | will attempt to kill all subprocesses of pid=311561
[2026-01-08 11:00:29] 2026-01-08 18:59:58,307 | INFO     | process IDs to be killed: [311561] (in reverse order)
[2026-01-08 11:00:29] 2026-01-08 18:59:58,368 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:00:29] 2026-01-08 18:59:58,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:00:29] 2026-01-08 18:59:58,375 | INFO     | did not find any defunct processes belonging to 311561
[2026-01-08 11:00:29] 2026-01-08 18:59:58,381 | INFO     | did not find any defunct processes belonging to 311561
[2026-01-08 11:00:29] 2026-01-08 18:59:58,381 | INFO     | ready for new job
[2026-01-08 11:00:29] 2026-01-08 18:59:58,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:00:29] 2026-01-08 18:59:58,383 | INFO     | ***************************************
[2026-01-08 11:00:29] 2026-01-08 18:59:58,383 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:00:29] 2026-01-08 18:59:58,383 | INFO     | ***************************************
[2026-01-08 11:00:29] 2026-01-08 18:59:58,383 | INFO     | 
[2026-01-08 11:00:29] 2026-01-08 18:59:58,385 | INFO     | architecture information:
[2026-01-08 11:00:29] 2026-01-08 18:59:58,385 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:00:29] 2026-01-08 18:59:58,394 | INFO     | cat /etc/os-release:
[2026-01-08 11:00:29] NAME="CentOS Linux"
[2026-01-08 11:00:29] VERSION="7 (Core)"
[2026-01-08 11:00:29] ID="centos"
[2026-01-08 11:00:29] ID_LIKE="rhel fedora"
[2026-01-08 11:00:29] VERSION_ID="7"
[2026-01-08 11:00:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:00:29] ANSI_COLOR="0;31"
[2026-01-08 11:00:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:00:29] HOME_URL="https://www.centos.org/"
[2026-01-08 11:00:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:00:29] 
[2026-01-08 11:00:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:00:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:00:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:00:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:00:29] 
[2026-01-08 11:00:29] 2026-01-08 18:59:58,395 | INFO     | ***************************************
[2026-01-08 11:00:29] 2026-01-08 18:59:58,897 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | INFO     | sufficient remaining disk space (2147050586112 B)
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | INFO     | update_server=False
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:00:29] 2026-01-08 18:59:58,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:00:29] 2026-01-08 18:59:59,182 | INFO     | all job control threads have been joined
[2026-01-08 11:00:29] 2026-01-08 18:59:59,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:00:29] 2026-01-08 18:59:59,441 | INFO     | aborting loop
[2026-01-08 11:00:29] 2026-01-08 18:59:59,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:00:29] 2026-01-08 18:59:59,850 | INFO     | all payload control threads have been joined
[2026-01-08 11:00:29] 2026-01-08 18:59:59,911 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:00:29] 2026-01-08 18:59:59,913 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:00:29] 2026-01-08 18:59:59,928 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:00:29] 2026-01-08 18:59:59,970 | INFO     | all data control threads have been joined
[2026-01-08 11:00:29] 2026-01-08 18:59:59,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,012 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,187 | INFO     | [job] control thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,276 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:00:29] 2026-01-08 19:00:00,447 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,525 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,558 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,853 | INFO     | [payload] control thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:00,973 | INFO     | [data] control thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:01,165 | INFO     | [job] validate thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:01,313 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:01,517 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:04,388 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:00:29] 2026-01-08 19:00:19,018 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:00:29] 2026-01-08 19:00:20,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642426763072)>', '<ExcThread(monitor, started 139642020009728)>']
[2026-01-08 11:00:29] 2026-01-08 19:00:25,651 | INFO     | all workflow threads have been joined
[2026-01-08 11:00:29] 2026-01-08 19:00:25,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:00:29] 2026-01-08 19:00:25,652 | INFO     | traces error code: 0
[2026-01-08 11:00:29] 2026-01-08 19:00:25,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:00:29] 2026-01-08 19:00:28,929 | INFO     | PID=304975 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | INFO     | .. there are 26 such processes running
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 11:00:29] 2026-01-08 19:00:28,930 | INFO     | [monitor] control thread has ended
[2026-01-08 11:00:29] 2026-01-08 19:00:29,037 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:00:29] 2026-01-08 19:00:29,039 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:00:29] 2026-01-08 19:00:29,041 [wrapper] pilotpid: 304975
[2026-01-08 11:00:29] 2026-01-08 19:00:29,042 [wrapper] Pilot exit status: 0
[2026-01-08 11:00:29] 2026-01-08 19:00:29,049 [wrapper] pandaids: 6963146374
[2026-01-08 11:00:29] 2026-01-08 19:00:29,089 [wrapper] cleanup supervisor_pilot  304981 304976
[2026-01-08 11:00:29] 2026-01-08 19:00:29,090 [wrapper] Test setup, not cleaning
[2026-01-08 11:00:29] 2026-01-08 19:00:29,092 [wrapper] apfmon messages muted
[2026-01-08 11:00:29] 2026-01-08 19:00:29,094 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:00:29] 2026-01-08 19:00:29,095 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:00:29]  *** Error codes and diagnostics ***
[2026-01-08 11:00:29]     "exeErrorCode": 65,
[2026-01-08 11:00:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 11:00:29]     "pilotErrorCode": 1305,
[2026-01-08 11:00:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 11:00:29]  *** Listing of results directory ***
[2026-01-08 11:00:29] total 225656
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc    579449 Jan  8 07:02 pilot3.tar.gz
[2026-01-08 11:00:29] -rwx------. 1 boinc boinc     36322 Jan  8 07:03 runpilot2-wrapper.sh
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc      5112 Jan  8 07:04 queuedata.json
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc       100 Jan  8 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:00:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 10:57 run_atlas
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc       105 Jan  8 10:57 job.xml
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc      6595 Jan  8 10:57 init_data.xml
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc 226962225 Jan  8 10:57 EVNT.47898824._001055.pool.root.1
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 10:57 start_atlas.sh
[2026-01-08 11:00:29] drwxrwx--x. 2 boinc boinc      4096 Jan  8 10:57 shared
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc    592396 Jan  8 10:57 input.tar.gz
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc         0 Jan  8 10:57 boinc_lockfile
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc      2518 Jan  8 10:57 pandaJob.out
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc    989829 Jan  8 10:57 agis_schedconf.cvmfs.json
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc   1516240 Jan  8 10:57 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:00:29] drwx------. 5 boinc boinc      4096 Jan  8 10:57 pilot3
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc       522 Jan  8 10:57 boinc_task_state.xml
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc       952 Jan  8 10:57 memory_monitor_summary.json
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc     20194 Jan  8 10:57 log.47898826._026754.job.log.tgz.1
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc      8387 Jan  8 10:59 heartbeat.json
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 11:00 boinc_mmap_file
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc        22 Jan  8 11:00 wrapper_checkpoint.txt
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc       892 Jan  8 11:00 pilotlog.txt
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc        95 Jan  8 11:00 pilot_heartbeat.json
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc     82020 Jan  8 11:00 log.47898826._026754.job.log.1
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc       188 Jan  8 11:00 output.list
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 11:00 runtime_log
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc    122880 Jan  8 11:00 result.tar.gz
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc      8636 Jan  8 11:00 runtime_log.err
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc       645 Jan  8 11:00 AcGLDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5SfKDmx0tZgn.diag
[2026-01-08 11:00:29] -rw-r--r--. 1 boinc boinc     21615 Jan  8 11:00 stderr.txt
[2026-01-08 11:00:29] No HITS result produced
[2026-01-08 11:00:29]  *** Contents of shared directory: ***
[2026-01-08 11:00:29] total 222360
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc 226962225 Jan  8 10:57 ATLAS.root_0
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 10:57 start_atlas.sh
[2026-01-08 11:00:29] -rw-r--r--. 2 boinc boinc    592396 Jan  8 10:57 input.tar.gz
[2026-01-08 11:00:29] -rw-------. 1 boinc boinc    122880 Jan  8 11:00 result.tar.gz
11:00:30 (301337): run_atlas exited; CPU time 20.449280
11:00:30 (301337): called boinc_finish(0)

</stderr_txt>
]]>

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