Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:40:07 (28076): wrapper (7.7.26015): starting
01:40:07 (28076): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:40:07] Arguments: --nthreads 8
[2026-01-09 01:40:07] Threads: 8
[2026-01-09 01:40:07] Checking for CVMFS
[2026-01-09 01:40:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:40:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:40:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:40:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:40:11] 2.11.2.0 10693 34706 99556 154925 0 84 19829154 25165824 96 130560 0 15019344 99.823 8374348 3351 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 01:40:11] CVMFS is ok
[2026-01-09 01:40:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:40:11] Checking for apptainer binary...
[2026-01-09 01:40:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:40:11] Running /usr/bin/apptainer --version
[2026-01-09 01:40:11] apptainer version 1.3.2-1.el7
[2026-01-09 01:40:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:40:25] cg-vwn439.simple-grid.lan
[2026-01-09 01:40:25] apptainer works
[2026-01-09 01:40:25] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:40:25] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:40:26] Starting ATLAS job with PandaID=6963077597
[2026-01-09 01:40:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:33:30]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:33:30] 2026-01-09 05:32:24,111 | INFO     | time since job start (17248s) is within the limit (174528.0s)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,787 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:33:30] 2026-01-09 05:32:24,788 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 06:33:30] 2026-01-09 05:32:24,790 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963077597/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,791 | INFO     | extracted standard info from prmon json
[2026-01-09 06:33:30] 2026-01-09 05:32:24,791 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:33:30] 2026-01-09 05:32:24,791 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:33:30] 2026-01-09 05:32:24,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:33:30] 2026-01-09 05:32:24,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:33:30] 2026-01-09 05:32:24,798 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:33:30] 2026-01-09 05:32:24,798 | INFO     | sum of square deviations: 6378584712.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,801 | INFO     | sum of deviations: 137594959666.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,801 | INFO     | mean x: 1767928379.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,801 | INFO     | mean y: 2426942.47810219
[2026-01-09 06:33:30] 2026-01-09 05:32:24,801 | INFO     | intersect: -38134251495.58587
[2026-01-09 06:33:30] 2026-01-09 05:32:24,802 | INFO     | chi2: 7.824990718462207
[2026-01-09 06:33:30] 2026-01-09 05:32:24,802 | INFO     | sum of square deviations: 6035722470.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,805 | INFO     | sum of deviations: 152668401540.99997
[2026-01-09 06:33:30] 2026-01-09 05:32:24,805 | INFO     | mean x: 1767928227.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,805 | INFO     | mean y: 2433526.8847583644
[2026-01-09 06:33:30] 2026-01-09 05:32:24,805 | INFO     | intersect: -44715788325.90102
[2026-01-09 06:33:30] 2026-01-09 05:32:24,806 | INFO     | chi2: 7.111212067044302
[2026-01-09 06:33:30] 2026-01-09 05:32:24,806 | INFO     | current chi2=7.111212067044302 (change=9.121782722806591 %)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,806 | INFO     | right removable region: 268
[2026-01-09 06:33:30] 2026-01-09 05:32:24,807 | INFO     | sum of square deviations: 6035722470.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,809 | INFO     | sum of deviations: 42624050790.99999
[2026-01-09 06:33:30] 2026-01-09 05:32:24,809 | INFO     | mean x: 1767928532.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,809 | INFO     | mean y: 2469159.7918215613
[2026-01-09 06:33:30] 2026-01-09 05:32:24,810 | INFO     | intersect: -12482577314.325808
[2026-01-09 06:33:30] 2026-01-09 05:32:24,810 | INFO     | chi2: 2.938911249268985
[2026-01-09 06:33:30] 2026-01-09 05:32:24,810 | INFO     | current chi2=2.938911249268985 (change=62.4419842143078 %)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,811 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,813 | INFO     | sum of deviations: -17747995567.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,813 | INFO     | mean x: 1767928684.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,814 | INFO     | mean y: 2496938.909090909
[2026-01-09 06:33:30] 2026-01-09 05:32:24,814 | INFO     | intersect: 5502083987.801837
[2026-01-09 06:33:30] 2026-01-09 05:32:24,814 | INFO     | chi2: 0.8941409956210435
[2026-01-09 06:33:30] 2026-01-09 05:32:24,814 | INFO     | current chi2=0.8941409956210435 (change=69.57577416318887 %)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,815 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,817 | INFO     | sum of deviations: -22896554167.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,817 | INFO     | mean x: 1767928837.0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,818 | INFO     | mean y: 2499367.752895753
[2026-01-09 06:33:30] 2026-01-09 05:32:24,818 | INFO     | intersect: 7516369170.949917
[2026-01-09 06:33:30] 2026-01-09 05:32:24,818 | INFO     | chi2: 0.846828665712657
[2026-01-09 06:33:30] 2026-01-09 05:32:24,818 | INFO     | current chi2=0.846828665712657 (change=5.291372405481173 %)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,818 | INFO     | left removable region: 30
[2026-01-09 06:33:30] 2026-01-09 05:32:24,819 | INFO     | sum of square deviations: 4180243959.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,821 | INFO     | sum of deviations: 3419986319.5000005
[2026-01-09 06:33:30] 2026-01-09 05:32:24,821 | INFO     | mean x: 1767929111.5
[2026-01-09 06:33:30] 2026-01-09 05:32:24,821 | INFO     | mean y: 2502919.3907563025
[2026-01-09 06:33:30] 2026-01-09 05:32:24,822 | INFO     | intersect: -1443894332.4813545
[2026-01-09 06:33:30] 2026-01-09 05:32:24,822 | INFO     | chi2: 0.0008207046960136185
[2026-01-09 06:33:30] 2026-01-09 05:32:24,822 | INFO     | current memory leak: 0.82 B/s (using 238 data points, chi2=0.00)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,823 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,823 | INFO     | ..............................
[2026-01-09 06:33:30] 2026-01-09 05:32:24,823 | INFO     | . Timing measurements:
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . get job = 0 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . initial setup = 9 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . payload setup = 153 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . stage-in = 0 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . payload execution = 16862 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . stage-out = 1 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | . log creation = 0 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,824 | INFO     | ..............................
[2026-01-09 06:33:30] 2026-01-09 05:32:24,940 | INFO     | 
[2026-01-09 06:33:30] 2026-01-09 05:32:24,940 | INFO     | job summary report
[2026-01-09 06:33:30] 2026-01-09 05:32:24,940 | INFO     | --------------------------------------------------
[2026-01-09 06:33:30] 2026-01-09 05:32:24,940 | INFO     | PanDA job id: 6963077597
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | task id: 47898826
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | errors: (none)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | pilot state: finished 
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | transexitcode: 0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | exeerrorcode: 0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | exeerrordiag: 
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | exitcode: 0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,941 | INFO     | exitmsg: OK
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | cpuconsumptiontime: 77673 s
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | nevents: 400
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | neventsw: 0
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | pid: 5902
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | pgrp: 5902
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | corecount: 8
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | event service: False
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | sizes: {0: 2283139, 1: 2283824, 2: 2284023, 13: 2284023, 24: 2284079, 35: 2284107, 45: 2284263, 56: 2284291, 67: 2284319, 78: 2284347, 88: 2284403, 99: 2284711, 10
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | --------------------------------------------------
[2026-01-09 06:33:30] 2026-01-09 05:32:24,942 | INFO     | 
[2026-01-09 06:33:30] 2026-01-09 05:32:24,943 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | job 6963077597 has completed (purged errors)
[2026-01-09 06:33:30] 2026-01-09 05:32:24,970 | INFO     | overall cleanup function is called
[2026-01-09 06:33:30] 2026-01-09 05:32:25,978 | INFO     | --- collectZombieJob: --- 10, [5902]
[2026-01-09 06:33:30] 2026-01-09 05:32:25,979 | INFO     | zombie collector waiting for pid 5902
[2026-01-09 06:33:30] 2026-01-09 05:32:25,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:33:30] 2026-01-09 05:32:25,979 | INFO     | collected zombie processes
[2026-01-09 06:33:30] 2026-01-09 05:32:25,979 | INFO     | will attempt to kill all subprocesses of pid=5902
[2026-01-09 06:33:30] 2026-01-09 05:32:26,040 | INFO     | process IDs to be killed: [5902] (in reverse order)
[2026-01-09 06:33:30] 2026-01-09 05:32:26,083 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:33:30] 2026-01-09 05:32:26,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:33:30] 2026-01-09 05:32:26,085 | INFO     | did not find any defunct processes belonging to 5902
[2026-01-09 06:33:30] 2026-01-09 05:32:26,086 | INFO     | did not find any defunct processes belonging to 5902
[2026-01-09 06:33:30] 2026-01-09 05:32:26,087 | INFO     | ready for new job
[2026-01-09 06:33:30] 2026-01-09 05:32:26,087 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:33:30] 2026-01-09 05:32:26,089 | INFO     | ***************************************
[2026-01-09 06:33:30] 2026-01-09 05:32:26,089 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:33:30] 2026-01-09 05:32:26,089 | INFO     | ***************************************
[2026-01-09 06:33:30] 2026-01-09 05:32:26,089 | INFO     | 
[2026-01-09 06:33:30] 2026-01-09 05:32:26,090 | INFO     | pilot is running in a VM
[2026-01-09 06:33:30] 2026-01-09 05:32:26,090 | INFO     | architecture information:
[2026-01-09 06:33:30] 2026-01-09 05:32:26,090 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:33:30] 2026-01-09 05:32:26,107 | INFO     | cat /etc/os-release:
[2026-01-09 06:33:30] NAME="CentOS Linux"
[2026-01-09 06:33:30] VERSION="7 (Core)"
[2026-01-09 06:33:30] ID="centos"
[2026-01-09 06:33:30] ID_LIKE="rhel fedora"
[2026-01-09 06:33:30] VERSION_ID="7"
[2026-01-09 06:33:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:33:30] ANSI_COLOR="0;31"
[2026-01-09 06:33:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:33:30] HOME_URL="https://www.centos.org/"
[2026-01-09 06:33:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:33:30] 
[2026-01-09 06:33:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:33:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:33:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:33:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:33:30] 
[2026-01-09 06:33:30] 2026-01-09 05:32:26,107 | INFO     | ***************************************
[2026-01-09 06:33:30] 2026-01-09 05:32:26,610 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 06:33:30] 2026-01-09 05:32:26,631 | INFO     | sufficient remaining disk space (498136514560 B)
[2026-01-09 06:33:30] 2026-01-09 05:32:26,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:33:30] 2026-01-09 05:32:26,631 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:33:30] 2026-01-09 05:32:26,631 | INFO     | update_server=False
[2026-01-09 06:33:30] 2026-01-09 05:32:26,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:33:30] 2026-01-09 05:32:26,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:33:30] 2026-01-09 05:32:26,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:33:30] 2026-01-09 05:32:26,633 | INFO     | aborting loop
[2026-01-09 06:33:30] 2026-01-09 05:32:26,637 | INFO     | all data control threads have been joined
[2026-01-09 06:33:30] 2026-01-09 05:32:27,637 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,638 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,639 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,642 | INFO     | [data] control thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,742 | INFO     | all payload control threads have been joined
[2026-01-09 06:33:30] 2026-01-09 05:32:27,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:33:30] 2026-01-09 05:32:27,788 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,823 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:27,862 | INFO     | all job control threads have been joined
[2026-01-09 06:33:30] 2026-01-09 05:32:28,005 | INFO     | [job] validate thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:28,382 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:28,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:33:30] 2026-01-09 05:32:28,614 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:28,625 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:28,747 | INFO     | [payload] control thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:28,868 | INFO     | [job] control thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:29,086 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:29,757 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:32,559 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:37,306 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:33:30] 2026-01-09 05:32:38,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:33:30] 2026-01-09 05:32:57,204 | INFO     | PID=31803 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:33:30] 2026-01-09 05:32:57,204 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:33:30] 2026-01-09 05:32:57,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:33:30] 2026-01-09 05:32:57,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:33:30] 2026-01-09 05:33:25,482 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:33:30] 2026-01-09 05:33:25,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140458673977152)>', '<ExcThread(monitor, started 140458080581376)>']
[2026-01-09 06:33:30] 2026-01-09 05:33:26,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:33:30] 2026-01-09 05:33:26,355 | INFO     | [monitor] control thread has ended
[2026-01-09 06:33:30] 2026-01-09 05:33:30,602 | INFO     | all workflow threads have been joined
[2026-01-09 06:33:30] 2026-01-09 05:33:30,602 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:33:30] 2026-01-09 05:33:30,603 | INFO     | traces error code: 0
[2026-01-09 06:33:30] 2026-01-09 05:33:30,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:33:30] 2026-01-09 05:33:30,743 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:33:30] 2026-01-09 05:33:30,747 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:33:30] 2026-01-09 05:33:30,751 [wrapper] pilotpid: 31803
[2026-01-09 06:33:30] 2026-01-09 05:33:30,754 [wrapper] Pilot exit status: 0
[2026-01-09 06:33:30] 2026-01-09 05:33:30,769 [wrapper] pandaids: 6963077597
[2026-01-09 06:33:30] 2026-01-09 05:33:30,808 [wrapper] cleanup supervisor_pilot 32418 31804
[2026-01-09 06:33:30] 2026-01-09 05:33:30,816 [wrapper] Test setup, not cleaning
[2026-01-09 06:33:30] 2026-01-09 05:33:30,822 [wrapper] apfmon messages muted
[2026-01-09 06:33:30] 2026-01-09 05:33:30,826 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:33:30] 2026-01-09 05:33:30,829 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:33:30]  *** Error codes and diagnostics ***
[2026-01-09 06:33:30]     "exeErrorCode": 0,
[2026-01-09 06:33:30]     "exeErrorDiag": "",
[2026-01-09 06:33:30]     "pilotErrorCode": 0,
[2026-01-09 06:33:30]     "pilotErrorDiag": "",
[2026-01-09 06:33:30]  *** Listing of results directory ***
[2026-01-09 06:33:30] total 441380
[2026-01-09 06:33:30] -rwx------. 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:09 queuedata.json
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc       100 Jan  9 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:33:30] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 01:40 run_atlas
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc       105 Jan  9 01:40 job.xml
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc 221182731 Jan  9 01:40 EVNT.47898824._000966.pool.root.1
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc    592385 Jan  9 01:40 input.tar.gz
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc      6390 Jan  9 01:40 init_data.xml
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:40 start_atlas.sh
[2026-01-09 06:33:30] drwxrwx--x. 2 boinc boinc        68 Jan  9 01:40 shared
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc         0 Jan  9 01:40 boinc_lockfile
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc      2518 Jan  9 01:40 pandaJob.out
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc    989837 Jan  9 01:44 agis_schedconf.cvmfs.json
[2026-01-09 06:33:30] drwx------. 5 boinc boinc      4096 Jan  9 01:44 pilot3
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc 221339663 Jan  9 06:31 HITS.47898826._024252.pool.root.1
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:32 boinc_task_state.xml
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc      1015 Jan  9 06:32 memory_monitor_summary.json
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc   1516240 Jan  9 06:32 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc    482829 Jan  9 06:32 log.47898826._024252.job.log.tgz.1
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc        95 Jan  9 06:32 pilot_heartbeat.json
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc      7776 Jan  9 06:32 heartbeat.json
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:33 wrapper_checkpoint.txt
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:33 boinc_mmap_file
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc      4881 Jan  9 06:33 pilotlog.txt
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc   2292272 Jan  9 06:33 log.47898826._024252.job.log.1
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc       357 Jan  9 06:33 output.list
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:33 runtime_log
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc   2795520 Jan  9 06:33 result.tar.gz
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:33 runtime_log.err
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc       657 Jan  9 06:33 jEeKDmw22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIHkKDmVF8ddm.diag
[2026-01-09 06:33:30] -rw-r--r--. 1 boinc boinc     20751 Jan  9 06:33 stderr.txt
[2026-01-09 06:33:30] HITS file was successfully produced:
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc 221339663 Jan  9 06:31 shared/HITS.pool.root.1
[2026-01-09 06:33:30]  *** Contents of shared directory: ***
[2026-01-09 06:33:30] total 435484
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc 221182731 Jan  9 01:40 ATLAS.root_0
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc    592385 Jan  9 01:40 input.tar.gz
[2026-01-09 06:33:30] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:40 start_atlas.sh
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc 221339663 Jan  9 06:31 HITS.pool.root.1
[2026-01-09 06:33:30] -rw-------. 1 boinc boinc   2795520 Jan  9 06:33 result.tar.gz
06:33:32 (28076): run_atlas exited; CPU time 77847.672346
06:33:32 (28076): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN