Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:49 (3459723): wrapper (7.7.26015): starting
05:16:49 (3459723): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 05:16:49] Arguments: --nthreads 3
[2026-01-09 05:16:49] Threads: 3
[2026-01-09 05:16:49] Checking for CVMFS
[2026-01-09 05:16:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:16:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:16:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:16:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:16:49] 2.9.2.0 2993219 1883 75788 154929 0 57 21867156 36864001 0 130560 0 1216248 99.990 67359 3814 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 05:16:49] CVMFS is ok
[2026-01-09 05:16:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:16:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:16:49] Further information can be found at the LHC@home message board.
[2026-01-09 05:16:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:16:49] Checking for apptainer binary...
[2026-01-09 05:16:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:16:49] Running /usr/bin/apptainer --version
[2026-01-09 05:16:49] apptainer version 1.4.1-1.1
[2026-01-09 05:16:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:16:49] magicA161
[2026-01-09 05:16:49] apptainer works
[2026-01-09 05:16:49] Set ATHENA_PROC_NUMBER=3
[2026-01-09 05:16:49] Set ATHENA_CORE_NUMBER=3
[2026-01-09 05:16:49] Starting ATLAS job with PandaID=6963078436
[2026-01-09 05:16:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 07:08:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 07:08:22] 2026-01-09 06:07:52,783 | INFO     | [job] job monitor thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:52,784 | INFO     | [job] queue monitor thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,160 | INFO     | [payload] validate_post thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,316 | INFO     | [payload] control thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,323 | INFO     | [job] control thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,323 | INFO     | [payload] failed_post thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,599 | INFO     | [data] control thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,777 | INFO     | [data] copytool_in thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,784 | INFO     | [data] copytool_out thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,825 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:53,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 07:08:22] 2026-01-09 06:07:54,082 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:54,211 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:54,212 | INFO     | [job] validate thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:54,286 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:07:57,990 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 07:08:22] 2026-01-09 06:08:02,479 | INFO     | [monitor] cgroup control has ended
[2026-01-09 07:08:22] 2026-01-09 06:08:04,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140535418279744)>', '<ExcThread(monitor, started 140534928623360)>']
[2026-01-09 07:08:22] 2026-01-09 06:08:09,293 | INFO     | all workflow threads have been joined
[2026-01-09 07:08:22] 2026-01-09 06:08:09,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 07:08:22] 2026-01-09 06:08:09,293 | INFO     | traces error code: 0
[2026-01-09 07:08:22] 2026-01-09 06:08:09,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | INFO     | PID=3463446 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 07:08:22] 2026-01-09 06:08:22,527 | INFO     | [monitor] control thread has ended
[2026-01-09 07:08:22] 2026-01-09 06:08:22,572 [wrapper] ==== pilot stdout END ====
[2026-01-09 07:08:22] 2026-01-09 06:08:22,574 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 07:08:22] 2026-01-09 06:08:22,577 [wrapper] pilotpid: 3463446
[2026-01-09 07:08:22] 2026-01-09 06:08:22,579 [wrapper] Pilot exit status: 0
[2026-01-09 07:08:22] 2026-01-09 06:08:22,586 [wrapper] pandaids: 6963078436
[2026-01-09 07:08:22] 2026-01-09 06:08:22,602 [wrapper] cleanup supervisor_pilot 3484245 3463447
[2026-01-09 07:08:22] 2026-01-09 06:08:22,604 [wrapper] Test setup, not cleaning
[2026-01-09 07:08:22] 2026-01-09 06:08:22,607 [wrapper] apfmon messages muted
[2026-01-09 07:08:22] 2026-01-09 06:08:22,609 [wrapper] ==== wrapper stdout END ====
[2026-01-09 07:08:22] 2026-01-09 06:08:22,611 [wrapper] ==== wrapper stderr END ====
[2026-01-09 07:08:22]  *** Error codes and diagnostics ***
[2026-01-09 07:08:22]     "exeErrorCode": 0,
[2026-01-09 07:08:22]     "exeErrorDiag": "",
[2026-01-09 07:08:22]     "pilotErrorCode": 0,
[2026-01-09 07:08:22]     "pilotErrorDiag": "",
[2026-01-09 07:08:22]  *** Listing of results directory ***
[2026-01-09 07:08:22] total 439432
[2026-01-09 07:08:22] -rwx------ 1 boinc boinc     36322 Jan  8 12:07 runpilot2-wrapper.sh
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:09 queuedata.json
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc       100 Jan  9 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 07:08:22] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 05:16 run_atlas
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc       105 Jan  9 05:16 job.xml
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc 222909428 Jan  9 05:16 EVNT.47898824._000968.pool.root.1
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc    592394 Jan  9 05:16 input.tar.gz
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 05:16 start_atlas.sh
[2026-01-09 07:08:22] drwxrwx--x 2 boinc boinc      4096 Jan  9 05:16 shared
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc         0 Jan  9 05:16 boinc_setup_complete
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      6448 Jan  9 05:16 init_data.xml
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc         0 Jan  9 05:16 boinc_lockfile
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      2519 Jan  9 05:16 pandaJob.out
[2026-01-09 07:08:22] -rw------- 1 boinc boinc    989771 Jan  9 05:16 agis_schedconf.cvmfs.json
[2026-01-09 07:08:22] -rw------- 1 boinc boinc   1516240 Jan  9 05:16 agis_ddmendpoints.agis.ALL.json
[2026-01-09 07:08:22] drwx------ 5 boinc boinc      4096 Jan  9 05:16 pilot3
[2026-01-09 07:08:22] -rw------- 1 boinc boinc 220674488 Jan  9 07:07 HITS.47898826._024595.pool.root.1
[2026-01-09 07:08:22] -rw------- 1 boinc boinc        95 Jan  9 07:07 pilot_heartbeat.json
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc       529 Jan  9 07:07 boinc_task_state.xml
[2026-01-09 07:08:22] -rw------- 1 boinc boinc      1011 Jan  9 07:07 memory_monitor_summary.json
[2026-01-09 07:08:22] -rw------- 1 boinc boinc    283971 Jan  9 07:07 log.47898826._024595.job.log.tgz.1
[2026-01-09 07:08:22] -rw------- 1 boinc boinc      7750 Jan  9 07:07 heartbeat.json
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      8192 Jan  9 07:08 boinc_mmap_file
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc        27 Jan  9 07:08 wrapper_checkpoint.txt
[2026-01-09 07:08:22] -rw------- 1 boinc boinc       747 Jan  9 07:08 pilotlog.txt
[2026-01-09 07:08:22] -rw------- 1 boinc boinc    962737 Jan  9 07:08 log.47898826._024595.job.log.1
[2026-01-09 07:08:22] -rw------- 1 boinc boinc       357 Jan  9 07:08 output.list
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc       620 Jan  9 07:08 runtime_log
[2026-01-09 07:08:22] -rw------- 1 boinc boinc   1269760 Jan  9 07:08 result.tar.gz
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      8912 Jan  9 07:08 runtime_log.err
[2026-01-09 07:08:22] -rw------- 1 boinc boinc       662 Jan  9 07:08 0eSMDm722x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2HkKDm14wTXm.diag
[2026-01-09 07:08:22] -rw-r--r-- 1 boinc boinc      6340 Jan  9 07:08 stderr.txt
[2026-01-09 07:08:22] HITS file was successfully produced:
[2026-01-09 07:08:22] -rw------- 1 boinc boinc 220674488 Jan  9 07:07 shared/HITS.pool.root.1
[2026-01-09 07:08:22]  *** Contents of shared directory: ***
[2026-01-09 07:08:22] total 435036
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc 222909428 Jan  9 05:16 ATLAS.root_0
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc    592394 Jan  9 05:16 input.tar.gz
[2026-01-09 07:08:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 05:16 start_atlas.sh
[2026-01-09 07:08:22] -rw------- 1 boinc boinc 220674488 Jan  9 07:07 HITS.pool.root.1
[2026-01-09 07:08:22] -rw------- 1 boinc boinc   1269760 Jan  9 07:08 result.tar.gz
07:08:23 (3459723): run_atlas exited; CPU time 19163.206579
07:08:23 (3459723): called boinc_finish(0)

</stderr_txt>
]]>

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