Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:34 (391893): wrapper (7.7.26015): starting
18:56:34 (391893): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 18:56:34] Arguments: --nthreads 9
[2026-01-08 18:56:34] Threads: 9
[2026-01-08 18:56:34] Checking for CVMFS
[2026-01-08 18:56:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 18:56:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 18:56:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 18:56:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 18:56:35] 2.13.3.0 9601 31927 242788 154924 0 105 23548481 32935937 11622 16776704 0 25011469 99.748 35074438 44553 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 18:56:35] CVMFS is ok
[2026-01-08 18:56:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 18:56:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 18:56:35] Further information can be found at the LHC@home message board.
[2026-01-08 18:56:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 18:56:35] Checking for apptainer binary...
[2026-01-08 18:56:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 18:56:35] Running /usr/bin/apptainer --version
[2026-01-08 18:56:35] apptainer version 1.4.5-2.el9
[2026-01-08 18:56:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 18:56:36] c6-5-7-2.aglt2.org
[2026-01-08 18:56:36] apptainer works
[2026-01-08 18:56:36] Set ATHENA_PROC_NUMBER=9
[2026-01-08 18:56:36] Set ATHENA_CORE_NUMBER=9
[2026-01-08 18:56:36] Starting ATLAS job with PandaID=6963076477
[2026-01-08 18:56:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:43:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:43:50] 2026-01-09 08:42:51,791 | INFO     | time since job start (31503s) is within the limit (174528.0s)
[2026-01-09 03:43:50] 2026-01-09 08:42:52,223 | INFO     | monitor loop #2016: job 0:6963076477 is in state 'finished'
[2026-01-09 03:43:50] 2026-01-09 08:42:52,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:43:50] 2026-01-09 08:42:53,798 | INFO     | time since job start (31505s) is within the limit (174528.0s)
[2026-01-09 03:43:50] 2026-01-09 08:42:54,730 | INFO     | monitor loop #2017: job 0:6963076477 is in state 'finished'
[2026-01-09 03:43:50] 2026-01-09 08:42:54,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 03:43:50] 2026-01-09 08:42:55,805 | INFO     | time since job start (31507s) is within the limit (174528.0s)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,618 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 03:43:50] 2026-01-09 08:42:56,629 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3035.179803571428
[2026-01-09 03:43:50] 2026-01-09 08:42:56,638 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076477/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,638 | INFO     | extracted standard info from prmon json
[2026-01-09 03:43:50] 2026-01-09 08:42:56,639 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:43:50] 2026-01-09 08:42:56,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:43:50] 2026-01-09 08:42:56,639 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:43:50] 2026-01-09 08:42:56,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:43:50] 2026-01-09 08:42:56,647 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:43:50] 2026-01-09 08:42:56,647 | INFO     | sum of square deviations: 41862903463.88686
[2026-01-09 03:43:50] 2026-01-09 08:42:56,652 | INFO     | sum of deviations: 354619255373.8575
[2026-01-09 03:43:50] 2026-01-09 08:42:56,653 | INFO     | mean x: 1767932489.6276803
[2026-01-09 03:43:50] 2026-01-09 08:42:56,653 | INFO     | mean y: 2519838.3762183236
[2026-01-09 03:43:50] 2026-01-09 08:42:56,653 | INFO     | intersect: -14973577162.727676
[2026-01-09 03:43:50] 2026-01-09 08:42:56,655 | INFO     | chi2: 3.456609219386564
[2026-01-09 03:43:50] 2026-01-09 08:42:56,655 | INFO     | sum of square deviations: 40650799058.1632
[2026-01-09 03:43:50] 2026-01-09 08:42:56,660 | INFO     | sum of deviations: 350034727498.48865
[2026-01-09 03:43:50] 2026-01-09 08:42:56,660 | INFO     | mean x: 1767932337.1318898
[2026-01-09 03:43:50] 2026-01-09 08:42:56,661 | INFO     | mean y: 2519261.57480315
[2026-01-09 03:43:50] 2026-01-09 08:42:56,661 | INFO     | intersect: -15220741491.01935
[2026-01-09 03:43:50] 2026-01-09 08:42:56,661 | INFO     | chi2: 3.455552336808934
[2026-01-09 03:43:50] 2026-01-09 08:42:56,661 | INFO     | current chi2=3.455552336808934 (change=0.030575703255729225 %)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,662 | INFO     | right removable region: 507
[2026-01-09 03:43:50] 2026-01-09 08:42:56,662 | INFO     | sum of square deviations: 40650633686.897705
[2026-01-09 03:43:50] 2026-01-09 08:42:56,667 | INFO     | sum of deviations: 214068258357.03156
[2026-01-09 03:43:50] 2026-01-09 08:42:56,667 | INFO     | mean x: 1767932642.1338582
[2026-01-09 03:43:50] 2026-01-09 08:42:56,668 | INFO     | mean y: 2537494.8818897638
[2026-01-09 03:43:50] 2026-01-09 08:42:56,668 | INFO     | intersect: -9307483709.44002
[2026-01-09 03:43:50] 2026-01-09 08:42:56,668 | INFO     | chi2: 0.7194935807797254
[2026-01-09 03:43:50] 2026-01-09 08:42:56,668 | INFO     | current chi2=0.7194935807797254 (change=79.18498924482381 %)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,669 | INFO     | sum of square deviations: 39462054114.42126
[2026-01-09 03:43:50] 2026-01-09 08:42:56,675 | INFO     | sum of deviations: 185091505066.03354
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | mean x: 1767932794.6361828
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | mean y: 2541202.3717693835
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | intersect: -8289711929.358269
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | chi2: 0.6082698205646132
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | current chi2=0.6082698205646132 (change=15.458617447924608 %)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,676 | INFO     | left removable region: 20
[2026-01-09 03:43:50] 2026-01-09 08:42:56,677 | INFO     | sum of square deviations: 35814803109.25254
[2026-01-09 03:43:50] 2026-01-09 08:42:56,681 | INFO     | sum of deviations: 154960411838.1519
[2026-01-09 03:43:50] 2026-01-09 08:42:56,682 | INFO     | mean x: 1767932916.6468172
[2026-01-09 03:43:50] 2026-01-09 08:42:56,682 | INFO     | mean y: 2544404.2915811087
[2026-01-09 03:43:50] 2026-01-09 08:42:56,682 | INFO     | intersect: -7646795786.972518
[2026-01-09 03:43:50] 2026-01-09 08:42:56,682 | INFO     | chi2: 0.5217471594223609
[2026-01-09 03:43:50] 2026-01-09 08:42:56,682 | INFO     | current memory leak: 4.33 B/s (using 487 data points, chi2=0.52)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,683 | INFO     | could have reported an average CPU frequency of 3031 MHz (21 samples)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,683 | INFO     | ..............................
[2026-01-09 03:43:50] 2026-01-09 08:42:56,683 | INFO     | . Timing measurements:
[2026-01-09 03:43:50] 2026-01-09 08:42:56,683 | INFO     | . get job = 0 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . initial setup = 6 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . payload setup = 61 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . stage-in = 0 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . payload execution = 31320 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . stage-out = 3 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | . log creation = 0 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,684 | INFO     | ..............................
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | 
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | job summary report
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | --------------------------------------------------
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | PanDA job id: 6963076477
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | task id: 47898826
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | errors: (none)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,890 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | pilot state: finished 
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | transexitcode: 0
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | exeerrorcode: 0
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | exeerrordiag: 
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | exitcode: 0
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | exitmsg: OK
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | cpuconsumptiontime: 56367 s
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | nevents: 400
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | neventsw: 0
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | pid: 411049
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | pgrp: 411049
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | corecount: 9
[2026-01-09 03:43:50] 2026-01-09 08:42:56,891 | INFO     | event service: False
[2026-01-09 03:43:50] 2026-01-09 08:42:56,892 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2283854, 3: 2284025, 4: 2284053, 15: 2284081, 27: 2284237, 38: 2284265, 49: 2284495, 50: 2284583, 60: 2284611, 31387: 2323593, 3
[2026-01-09 03:43:50] 2026-01-09 08:42:56,892 | INFO     | --------------------------------------------------
[2026-01-09 03:43:50] 2026-01-09 08:42:56,892 | INFO     | 
[2026-01-09 03:43:50] 2026-01-09 08:42:56,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | job 6963076477 has completed (purged errors)
[2026-01-09 03:43:50] 2026-01-09 08:42:56,939 | INFO     | overall cleanup function is called
[2026-01-09 03:43:50] 2026-01-09 08:42:57,947 | INFO     | --- collectZombieJob: --- 10, [411049]
[2026-01-09 03:43:50] 2026-01-09 08:42:57,948 | INFO     | zombie collector waiting for pid 411049
[2026-01-09 03:43:50] 2026-01-09 08:42:57,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:43:50] 2026-01-09 08:42:57,948 | INFO     | collected zombie processes
[2026-01-09 03:43:50] 2026-01-09 08:42:57,948 | INFO     | will attempt to kill all subprocesses of pid=411049
[2026-01-09 03:43:50] 2026-01-09 08:42:58,309 | INFO     | process IDs to be killed: [411049] (in reverse order)
[2026-01-09 03:43:50] 2026-01-09 08:42:58,416 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:43:50] 2026-01-09 08:42:58,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:43:50] 2026-01-09 08:42:58,497 | INFO     | did not find any defunct processes belonging to 411049
[2026-01-09 03:43:50] 2026-01-09 08:42:58,576 | INFO     | did not find any defunct processes belonging to 411049
[2026-01-09 03:43:50] 2026-01-09 08:42:58,576 | INFO     | ready for new job
[2026-01-09 03:43:50] 2026-01-09 08:42:58,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:43:50] 2026-01-09 08:42:58,579 | INFO     | ***************************************
[2026-01-09 03:43:50] 2026-01-09 08:42:58,580 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:43:50] 2026-01-09 08:42:58,580 | INFO     | ***************************************
[2026-01-09 03:43:50] 2026-01-09 08:42:58,580 | INFO     | 
[2026-01-09 03:43:50] 2026-01-09 08:42:58,583 | INFO     | architecture information:
[2026-01-09 03:43:50] 2026-01-09 08:42:58,583 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:43:50] 2026-01-09 08:42:58,602 | INFO     | cat /etc/os-release:
[2026-01-09 03:43:50] NAME="CentOS Linux"
[2026-01-09 03:43:50] VERSION="7 (Core)"
[2026-01-09 03:43:50] ID="centos"
[2026-01-09 03:43:50] ID_LIKE="rhel fedora"
[2026-01-09 03:43:50] VERSION_ID="7"
[2026-01-09 03:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:43:50] ANSI_COLOR="0;31"
[2026-01-09 03:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:43:50] HOME_URL="https://www.centos.org/"
[2026-01-09 03:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:43:50] 
[2026-01-09 03:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:43:50] 
[2026-01-09 03:43:50] 2026-01-09 08:42:58,602 | INFO     | ***************************************
[2026-01-09 03:43:50] 2026-01-09 08:42:59,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 03:43:50] 2026-01-09 08:42:59,272 | INFO     | sufficient remaining disk space (75179753472 B)
[2026-01-09 03:43:50] 2026-01-09 08:42:59,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:43:50] 2026-01-09 08:42:59,272 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:43:50] 2026-01-09 08:42:59,272 | INFO     | update_server=False
[2026-01-09 03:43:50] 2026-01-09 08:42:59,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:43:50] 2026-01-09 08:42:59,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:43:50] 2026-01-09 08:42:59,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:43:50] 2026-01-09 08:42:59,757 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 03:43:50] 2026-01-09 08:42:59,758 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 03:43:50] 2026-01-09 08:42:59,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:43:50] 2026-01-09 08:42:59,758 | INFO     | will abort loop
[2026-01-09 03:43:50] 2026-01-09 08:43:00,195 | INFO     | all data control threads have been joined
[2026-01-09 03:43:50] 2026-01-09 08:43:00,278 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:00,308 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:00,384 | INFO     | all job control threads have been joined
[2026-01-09 03:43:50] 2026-01-09 08:43:00,447 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:00,486 | INFO     | all payload control threads have been joined
[2026-01-09 03:43:50] 2026-01-09 08:43:00,765 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:00,949 | INFO     | [job] validate thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:00,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,201 | INFO     | [data] control thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,289 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,390 | INFO     | [job] control thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,415 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,435 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,493 | INFO     | [payload] control thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,813 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:01,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:43:50] 2026-01-09 08:43:02,912 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:03,753 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:43:50] 2026-01-09 08:43:29,267 | INFO     | PID=396515 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 03:43:50] 2026-01-09 08:43:29,267 | INFO     | .. there are 9 such processes running
[2026-01-09 03:43:50] 2026-01-09 08:43:29,268 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:43:50] 2026-01-09 08:43:29,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:43:50] 2026-01-09 08:43:29,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:43:50] 2026-01-09 08:43:42,903 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:43:50] 2026-01-09 08:43:44,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974778984256)>', '<ExcThread(monitor, started 139974426998528)>']
[2026-01-09 03:43:50] 2026-01-09 08:43:45,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:43:50] 2026-01-09 08:43:45,386 | INFO     | [monitor] control thread has ended
[2026-01-09 03:43:50] 2026-01-09 08:43:49,456 | INFO     | all workflow threads have been joined
[2026-01-09 03:43:50] 2026-01-09 08:43:49,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:43:50] 2026-01-09 08:43:49,457 | INFO     | traces error code: 0
[2026-01-09 03:43:50] 2026-01-09 08:43:49,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:43:50] 2026-01-09 08:43:49,745 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:43:50] 2026-01-09 08:43:49,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:43:50] 2026-01-09 08:43:49,751 [wrapper] pilotpid: 396515
[2026-01-09 03:43:50] 2026-01-09 08:43:49,753 [wrapper] Pilot exit status: 0
[2026-01-09 03:43:50] 2026-01-09 08:43:49,868 [wrapper] pandaids: 6963076477
[2026-01-09 03:43:50] 2026-01-09 08:43:50,348 [wrapper] cleanup supervisor_pilot 1489006 396516
[2026-01-09 03:43:50] 2026-01-09 08:43:50,351 [wrapper] Test setup, not cleaning
[2026-01-09 03:43:50] 2026-01-09 08:43:50,353 [wrapper] apfmon messages muted
[2026-01-09 03:43:50] 2026-01-09 08:43:50,356 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:43:50] 2026-01-09 08:43:50,358 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:43:50]  *** Error codes and diagnostics ***
[2026-01-09 03:43:50]     "exeErrorCode": 0,
[2026-01-09 03:43:50]     "exeErrorDiag": "",
[2026-01-09 03:43:50]     "pilotErrorCode": 0,
[2026-01-09 03:43:50]     "pilotErrorDiag": "",
[2026-01-09 03:43:50]  *** Listing of results directory ***
[2026-01-09 03:43:50] total 453452
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-09 03:43:50] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas       100 Jan  8 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:43:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 18:56 run_atlas
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas       105 Jan  8 18:56 job.xml
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas 224458820 Jan  8 18:56 EVNT.47898824._000946.pool.root.1
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 18:56 start_atlas.sh
[2026-01-09 03:43:50] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 18:56 shared
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas    592394 Jan  8 18:56 input.tar.gz
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas         0 Jan  8 18:56 boinc_lockfile
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 18:56 pandaJob.out
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas        57 Jan  8 18:56 setup.sh.local
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas    989837 Jan  8 18:57 agis_schedconf.cvmfs.json
[2026-01-09 03:43:50] drwx------. 5 boincer umatlas      4096 Jan  8 18:57 pilot3
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas      6838 Jan  9 03:39 init_data.xml
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas 226447733 Jan  9 03:41 HITS.47898826._023774.pool.root.1
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas       531 Jan  9 03:42 boinc_task_state.xml
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas        95 Jan  9 03:42 pilot_heartbeat.json
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas      1050 Jan  9 03:42 memory_monitor_summary.json
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas   1516240 Jan  9 03:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas    705836 Jan  9 03:42 log.47898826._023774.job.log.tgz.1
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas      7817 Jan  9 03:42 heartbeat.json
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas      5008 Jan  9 03:43 pilotlog.txt
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 03:43 boinc_mmap_file
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas        28 Jan  9 03:43 wrapper_checkpoint.txt
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas   4051684 Jan  9 03:43 log.47898826._023774.job.log.1
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas       357 Jan  9 03:43 output.list
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas       620 Jan  9 03:43 runtime_log
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas   4771840 Jan  9 03:43 result.tar.gz
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 03:43 runtime_log.err
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas       657 Jan  9 03:43 EiPKDmP22x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBDkKDmuAPCvn.diag
[2026-01-09 03:43:50] -rw-r--r--. 1 boincer umatlas     21415 Jan  9 03:43 stderr.txt
[2026-01-09 03:43:50] HITS file was successfully produced:
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas 226447733 Jan  9 03:41 shared/HITS.pool.root.1
[2026-01-09 03:43:50]  *** Contents of shared directory: ***
[2026-01-09 03:43:50] total 445604
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas 224458820 Jan  8 18:56 ATLAS.root_0
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 18:56 start_atlas.sh
[2026-01-09 03:43:50] -rw-r--r--. 2 boincer umatlas    592394 Jan  8 18:56 input.tar.gz
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas 226447733 Jan  9 03:41 HITS.pool.root.1
[2026-01-09 03:43:50] -rw-------. 1 boincer umatlas   4771840 Jan  9 03:43 result.tar.gz
03:44:11 (391893): run_atlas exited; CPU time 57089.492894
03:44:11 (391893): called boinc_finish(0)

</stderr_txt>
]]>

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