Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:35:44 (23992): wrapper (7.7.26015): starting
20:35:44 (23992): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:35:44] Arguments: --nthreads 8
[2026-01-08 20:35:44] Threads: 8
[2026-01-08 20:35:44] Checking for CVMFS
[2026-01-08 20:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:35:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:35:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:35:44] 2.11.2.0 17738 34403 124936 154918 3 126 18803418 25165824 757 130560 0 15079956 99.812 10214011 3659 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 20:35:44] CVMFS is ok
[2026-01-08 20:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:35:44] Checking for apptainer binary...
[2026-01-08 20:35:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:35:44] Running /usr/bin/apptainer --version
[2026-01-08 20:35:45] apptainer version 1.3.2-1.el7
[2026-01-08 20:35:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:35:46] cg-vwn450.simple-grid.lan
[2026-01-08 20:35:46] apptainer works
[2026-01-08 20:35:46] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:35:46] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:35:46] Starting ATLAS job with PandaID=6963074639
[2026-01-08 20:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:51:55]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:51:55] 2026-01-09 01:51:16,320 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 02:51:55] 2026-01-09 01:51:16,321 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 02:51:55] 2026-01-09 01:51:16,323 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963074639/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,323 | INFO     | extracted standard info from prmon json
[2026-01-09 02:51:55] 2026-01-09 01:51:16,324 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:51:55] 2026-01-09 01:51:16,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:51:55] 2026-01-09 01:51:16,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:51:55] 2026-01-09 01:51:16,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:51:55] 2026-01-09 01:51:16,338 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:51:55] 2026-01-09 01:51:16,339 | INFO     | sum of square deviations: 14709598590.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,343 | INFO     | sum of deviations: 160139002062.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,344 | INFO     | mean x: 1767912318.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,344 | INFO     | mean y: 2450265.033149171
[2026-01-09 02:51:55] 2026-01-09 01:51:16,344 | INFO     | intersect: -19244282586.028515
[2026-01-09 02:51:55] 2026-01-09 01:51:16,345 | INFO     | chi2: 7.6625603739253725
[2026-01-09 02:51:55] 2026-01-09 01:51:16,345 | INFO     | sum of square deviations: 14108461738.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,350 | INFO     | sum of deviations: 181579178118.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,350 | INFO     | mean x: 1767912166.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,350 | INFO     | mean y: 2455636.193277311
[2026-01-09 02:51:55] 2026-01-09 01:51:16,350 | INFO     | intersect: -22750984394.938004
[2026-01-09 02:51:55] 2026-01-09 01:51:16,351 | INFO     | chi2: 6.938285901909816
[2026-01-09 02:51:55] 2026-01-09 01:51:16,351 | INFO     | current chi2=6.938285901909816 (change=9.452120918748804 %)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,351 | INFO     | right removable region: 356
[2026-01-09 02:51:55] 2026-01-09 01:51:16,352 | INFO     | sum of square deviations: 14108461738.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,357 | INFO     | sum of deviations: 35252628584.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,357 | INFO     | mean x: 1767912471.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,357 | INFO     | mean y: 2481930.3473389354
[2026-01-09 02:51:55] 2026-01-09 01:51:16,357 | INFO     | intersect: -4414977808.819065
[2026-01-09 02:51:55] 2026-01-09 01:51:16,358 | INFO     | chi2: 3.0027995616390424
[2026-01-09 02:51:55] 2026-01-09 01:51:16,358 | INFO     | current chi2=3.0027995616390424 (change=60.81206000206991 %)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,359 | INFO     | sum of square deviations: 13523929848.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,363 | INFO     | sum of deviations: -44755435595.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,364 | INFO     | mean x: 1767912623.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,364 | INFO     | mean y: 2502751.0482954546
[2026-01-09 02:51:55] 2026-01-09 01:51:16,364 | INFO     | intersect: 5853146790.822502
[2026-01-09 02:51:55] 2026-01-09 01:51:16,365 | INFO     | chi2: 0.9747437961730848
[2026-01-09 02:51:55] 2026-01-09 01:51:16,365 | INFO     | current chi2=0.9747437961730848 (change=67.53883247401859 %)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,366 | INFO     | sum of square deviations: 12955770358.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,370 | INFO     | sum of deviations: -54033166088.00002
[2026-01-09 02:51:55] 2026-01-09 01:51:16,370 | INFO     | mean x: 1767912776.0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,370 | INFO     | mean y: 2505229.4899135446
[2026-01-09 02:51:55] 2026-01-09 01:51:16,371 | INFO     | intersect: 7375739087.07518
[2026-01-09 02:51:55] 2026-01-09 01:51:16,371 | INFO     | chi2: 0.9314019713894588
[2026-01-09 02:51:55] 2026-01-09 01:51:16,371 | INFO     | current chi2=0.9314019713894588 (change=4.446483778998049 %)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,371 | INFO     | left removable region: 30
[2026-01-09 02:51:55] 2026-01-09 01:51:16,372 | INFO     | sum of square deviations: 10743038637.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,376 | INFO     | sum of deviations: 3159941977.499999
[2026-01-09 02:51:55] 2026-01-09 01:51:16,376 | INFO     | mean x: 1767913050.5
[2026-01-09 02:51:55] 2026-01-09 01:51:16,377 | INFO     | mean y: 2501699.420245399
[2026-01-09 02:51:55] 2026-01-09 01:51:16,377 | INFO     | intersect: -517509709.76752365
[2026-01-09 02:51:55] 2026-01-09 01:51:16,377 | INFO     | chi2: 0.0479680901203821
[2026-01-09 02:51:55] 2026-01-09 01:51:16,378 | INFO     | current memory leak: 0.29 B/s (using 326 data points, chi2=0.05)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,378 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | ..............................
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . Timing measurements:
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . get job = 0 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . initial setup = 2 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . payload setup = 138 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . stage-in = 0 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . payload execution = 22211 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,379 | INFO     | . stage-out = 5 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,380 | INFO     | . log creation = 1 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,380 | INFO     | ..............................
[2026-01-09 02:51:55] 2026-01-09 01:51:16,526 | INFO     | 
[2026-01-09 02:51:55] 2026-01-09 01:51:16,526 | INFO     | job summary report
[2026-01-09 02:51:55] 2026-01-09 01:51:16,526 | INFO     | --------------------------------------------------
[2026-01-09 02:51:55] 2026-01-09 01:51:16,526 | INFO     | PanDA job id: 6963074639
[2026-01-09 02:51:55] 2026-01-09 01:51:16,526 | INFO     | task id: 47898826
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | errors: (none)
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | pilot state: finished 
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | transexitcode: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | exeerrorcode: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | exeerrordiag: 
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | exitcode: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,527 | INFO     | exitmsg: OK
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | cpuconsumptiontime: 81265 s
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | nevents: 400
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | neventsw: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | pid: 1774
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | pgrp: 1774
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | corecount: 8
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | event service: False
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | sizes: {0: 2283799, 1: 2283998, 7: 2284260, 11: 2284288, 22354: 2317858, 22360: 2327042, 22476: 2327180}
[2026-01-09 02:51:55] 2026-01-09 01:51:16,528 | INFO     | --------------------------------------------------
[2026-01-09 02:51:55] 2026-01-09 01:51:16,529 | INFO     | 
[2026-01-09 02:51:55] 2026-01-09 01:51:16,529 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,187 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:51:55] 2026-01-09 01:51:17,188 | INFO     | job 6963074639 has completed (purged errors)
[2026-01-09 02:51:55] 2026-01-09 01:51:17,188 | INFO     | overall cleanup function is called
[2026-01-09 02:51:55] 2026-01-09 01:51:18,197 | INFO     | --- collectZombieJob: --- 10, [1774]
[2026-01-09 02:51:55] 2026-01-09 01:51:18,197 | INFO     | zombie collector waiting for pid 1774
[2026-01-09 02:51:55] 2026-01-09 01:51:18,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:51:55] 2026-01-09 01:51:18,197 | INFO     | collected zombie processes
[2026-01-09 02:51:55] 2026-01-09 01:51:18,197 | INFO     | will attempt to kill all subprocesses of pid=1774
[2026-01-09 02:51:55] 2026-01-09 01:51:18,298 | INFO     | process IDs to be killed: [1774] (in reverse order)
[2026-01-09 02:51:55] 2026-01-09 01:51:19,334 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:51:55] 2026-01-09 01:51:19,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:51:55] 2026-01-09 01:51:19,337 | INFO     | did not find any defunct processes belonging to 1774
[2026-01-09 02:51:55] 2026-01-09 01:51:19,339 | INFO     | did not find any defunct processes belonging to 1774
[2026-01-09 02:51:55] 2026-01-09 01:51:19,339 | INFO     | ready for new job
[2026-01-09 02:51:55] 2026-01-09 01:51:19,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:51:55] 2026-01-09 01:51:19,341 | INFO     | ***************************************
[2026-01-09 02:51:55] 2026-01-09 01:51:19,342 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:51:55] 2026-01-09 01:51:19,342 | INFO     | ***************************************
[2026-01-09 02:51:55] 2026-01-09 01:51:19,342 | INFO     | 
[2026-01-09 02:51:55] 2026-01-09 01:51:19,342 | INFO     | pilot is running in a VM
[2026-01-09 02:51:55] 2026-01-09 01:51:19,343 | INFO     | architecture information:
[2026-01-09 02:51:55] 2026-01-09 01:51:19,367 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:51:55] 2026-01-09 01:51:19,684 | INFO     | cat /etc/os-release:
[2026-01-09 02:51:55] NAME="CentOS Linux"
[2026-01-09 02:51:55] VERSION="7 (Core)"
[2026-01-09 02:51:55] ID="centos"
[2026-01-09 02:51:55] ID_LIKE="rhel fedora"
[2026-01-09 02:51:55] VERSION_ID="7"
[2026-01-09 02:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:51:55] ANSI_COLOR="0;31"
[2026-01-09 02:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:51:55] HOME_URL="https://www.centos.org/"
[2026-01-09 02:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:51:55] 
[2026-01-09 02:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:51:55] 
[2026-01-09 02:51:55] 2026-01-09 01:51:19,685 | INFO     | ***************************************
[2026-01-09 02:51:55] 2026-01-09 01:51:20,188 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 02:51:55] 2026-01-09 01:51:20,512 | INFO     | sufficient remaining disk space (496018391040 B)
[2026-01-09 02:51:55] 2026-01-09 01:51:20,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:51:55] 2026-01-09 01:51:20,513 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:51:55] 2026-01-09 01:51:20,513 | INFO     | update_server=False
[2026-01-09 02:51:55] 2026-01-09 01:51:20,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:51:55] 2026-01-09 01:51:20,871 | INFO     | all job control threads have been joined
[2026-01-09 02:51:55] 2026-01-09 01:51:21,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:51:55] 2026-01-09 01:51:21,434 [wrapper] supervise_pilot (15 min periods counter: 26)
[2026-01-09 02:51:55] 2026-01-09 01:51:21,489 | INFO     | all payload control threads have been joined
[2026-01-09 02:51:55] 2026-01-09 01:51:21,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:51:55] 2026-01-09 01:51:21,494 | INFO     | aborting loop
[2026-01-09 02:51:55] 2026-01-09 01:51:21,519 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:21,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:51:55] 2026-01-09 01:51:21,582 | INFO     | all data control threads have been joined
[2026-01-09 02:51:55] 2026-01-09 01:51:21,638 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:21,657 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:21,817 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:21,877 | INFO     | [job] control thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:21,934 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,451 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,495 | INFO     | [payload] control thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,500 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,508 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,555 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,588 | INFO     | [data] control thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,753 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:22,932 | INFO     | [job] validate thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:23,107 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:23,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:51:55] 2026-01-09 01:51:27,733 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:51:55] 2026-01-09 01:51:43,640 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:51:55] 2026-01-09 01:51:45,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140246602536768)>', '<ExcThread(monitor, started 140246142396160)>']
[2026-01-09 02:51:55] 2026-01-09 01:51:49,303 | INFO     | PID=27705 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 02:51:55] 2026-01-09 01:51:49,303 | INFO     | .. there are 2 such processes running
[2026-01-09 02:51:55] 2026-01-09 01:51:49,304 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:51:55] 2026-01-09 01:51:49,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:51:55] 2026-01-09 01:51:49,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:51:55] 2026-01-09 01:51:49,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:51:55] 2026-01-09 01:51:49,304 | INFO     | [monitor] control thread has ended
[2026-01-09 02:51:55] 2026-01-09 01:51:50,355 | INFO     | all workflow threads have been joined
[2026-01-09 02:51:55] 2026-01-09 01:51:50,355 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:51:55] 2026-01-09 01:51:50,355 | INFO     | traces error code: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:50,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:51:55] 2026-01-09 01:51:50,760 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:51:55] 2026-01-09 01:51:50,818 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:51:55] 2026-01-09 01:51:50,919 [wrapper] pilotpid: 27705
[2026-01-09 02:51:55] 2026-01-09 01:51:51,009 [wrapper] Pilot exit status: 0
[2026-01-09 02:51:55] 2026-01-09 01:51:51,535 [wrapper] pandaids: 6963074639
[2026-01-09 02:51:55] 2026-01-09 01:51:52,391 [wrapper] cleanup supervisor_pilot  6891 27706
[2026-01-09 02:51:55] 2026-01-09 01:51:52,479 [wrapper] Test setup, not cleaning
[2026-01-09 02:51:55] 2026-01-09 01:51:52,534 [wrapper] apfmon messages muted
[2026-01-09 02:51:55] 2026-01-09 01:51:52,641 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:51:55] 2026-01-09 01:51:52,747 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:51:55]  *** Error codes and diagnostics ***
[2026-01-09 02:51:55]     "exeErrorCode": 0,
[2026-01-09 02:51:55]     "exeErrorDiag": "",
[2026-01-09 02:51:55]     "pilotErrorCode": 0,
[2026-01-09 02:51:55]     "pilotErrorDiag": "",
[2026-01-09 02:51:55]  *** Listing of results directory ***
[2026-01-09 02:51:55] total 444380
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:06 queuedata.json
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:06 pilot3.tar.gz
[2026-01-09 02:51:55] -rwx------. 1 boinc boinc     36322 Jan  8 12:06 runpilot2-wrapper.sh
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc       100 Jan  8 20:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:51:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 20:35 run_atlas
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc       105 Jan  8 20:35 job.xml
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc 224324011 Jan  8 20:35 EVNT.47898824._000917.pool.root.1
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc     15847 Jan  8 20:35 start_atlas.sh
[2026-01-09 02:51:55] drwxrwx--x. 2 boinc boinc        68 Jan  8 20:35 shared
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc    592402 Jan  8 20:35 input.tar.gz
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc      6391 Jan  8 20:35 init_data.xml
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc         0 Jan  8 20:35 boinc_lockfile
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc      2519 Jan  8 20:35 pandaJob.out
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc    989845 Jan  8 20:36 agis_schedconf.cvmfs.json
[2026-01-09 02:51:55] drwx------. 5 boinc boinc      4096 Jan  8 20:36 pilot3
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc 219706840 Jan  9 02:47 HITS.47898826._023005.pool.root.1
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc       531 Jan  9 02:48 boinc_task_state.xml
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc      1016 Jan  9 02:49 memory_monitor_summary.json
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc   1516240 Jan  9 02:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc    554465 Jan  9 02:49 log.47898826._023005.job.log.tgz.1
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc        95 Jan  9 02:51 pilot_heartbeat.json
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc      7780 Jan  9 02:51 heartbeat.json
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc      8192 Jan  9 02:51 boinc_mmap_file
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc        28 Jan  9 02:51 wrapper_checkpoint.txt
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc      4885 Jan  9 02:51 pilotlog.txt
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc   3004105 Jan  9 02:51 log.47898826._023005.job.log.1
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc       357 Jan  9 02:51 output.list
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc       620 Jan  9 02:51 runtime_log
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc   3573760 Jan  9 02:51 result.tar.gz
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc      8833 Jan  9 02:51 runtime_log.err
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc       657 Jan  9 02:51 rfcKDm112x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlweKDmU5otem.diag
[2026-01-09 02:51:55] -rw-r--r--. 1 boinc boinc     20688 Jan  9 02:51 stderr.txt
[2026-01-09 02:51:55] HITS file was successfully produced:
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc 219706840 Jan  9 02:47 shared/HITS.pool.root.1
[2026-01-09 02:51:55]  *** Contents of shared directory: ***
[2026-01-09 02:51:55] total 437716
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc 224324011 Jan  8 20:35 ATLAS.root_0
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc     15847 Jan  8 20:35 start_atlas.sh
[2026-01-09 02:51:55] -rw-r--r--. 2 boinc boinc    592402 Jan  8 20:35 input.tar.gz
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc 219706840 Jan  9 02:47 HITS.pool.root.1
[2026-01-09 02:51:55] -rw-------. 1 boinc boinc   3573760 Jan  9 02:51 result.tar.gz
02:51:56 (23992): run_atlas exited; CPU time 81498.950200
02:51:56 (23992): called boinc_finish(0)

</stderr_txt>
]]>

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