Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:39:57 (2360500): wrapper (7.7.26015): starting
16:39:57 (2360500): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 16:39:57] Arguments: --nthreads 8
[2026-01-08 16:39:57] Threads: 8
[2026-01-08 16:39:57] Checking for CVMFS
[2026-01-08 16:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:39:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:39:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:40:00] 2.13.3.0 11323 92522 335024 154920 0 528 19762913 32935937 17493 16776704 0 310374726 99.419 487285593 40028 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 16:40:00] CVMFS is ok
[2026-01-08 16:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 16:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 16:40:00] Further information can be found at the LHC@home message board.
[2026-01-08 16:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:40:00] Checking for apptainer binary...
[2026-01-08 16:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:40:00] Running /usr/bin/apptainer --version
[2026-01-08 16:40:00] apptainer version 1.4.5-2.el9
[2026-01-08 16:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:40:01] c6-4-5-3.aglt2.org
[2026-01-08 16:40:01] apptainer works
[2026-01-08 16:40:01] Set ATHENA_PROC_NUMBER=8
[2026-01-08 16:40:01] Set ATHENA_CORE_NUMBER=8
[2026-01-08 16:40:01] Starting ATLAS job with PandaID=6963077484
[2026-01-08 16:40:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 00:19:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 00:19:39] 2026-01-09 05:18:43,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 00:19:39] 2026-01-09 05:18:44,516 | INFO     | time since job start (27421s) is within the limit (174528.0s)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,205 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 00:19:39] 2026-01-09 05:18:45,211 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2982.3824531250007
[2026-01-09 00:19:39] 2026-01-09 05:18:45,222 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963077484/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,223 | INFO     | extracted standard info from prmon json
[2026-01-09 00:19:39] 2026-01-09 05:18:45,223 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 00:19:39] 2026-01-09 05:18:45,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:19:39] 2026-01-09 05:18:45,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:19:39] 2026-01-09 05:18:45,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:19:39] 2026-01-09 05:18:45,232 | INFO     | fitting pss+swap vs Time
[2026-01-09 00:19:39] 2026-01-09 05:18:45,233 | INFO     | sum of square deviations: 27694046713.933052
[2026-01-09 00:19:39] 2026-01-09 05:18:45,238 | INFO     | sum of deviations: 234095543693.73865
[2026-01-09 00:19:39] 2026-01-09 05:18:45,239 | INFO     | mean x: 1767922294.5637584
[2026-01-09 00:19:39] 2026-01-09 05:18:45,239 | INFO     | mean y: 2493868.1319910516
[2026-01-09 00:19:39] 2026-01-09 05:18:45,239 | INFO     | intersect: -14941610726.952988
[2026-01-09 00:19:39] 2026-01-09 05:18:45,239 | INFO     | chi2: 5.306931159081881
[2026-01-09 00:19:39] 2026-01-09 05:18:45,240 | INFO     | sum of square deviations: 26775093271.963886
[2026-01-09 00:19:39] 2026-01-09 05:18:45,245 | INFO     | sum of deviations: 259938950765.09064
[2026-01-09 00:19:39] 2026-01-09 05:18:45,245 | INFO     | mean x: 1767922142.0678732
[2026-01-09 00:19:39] 2026-01-09 05:18:45,246 | INFO     | mean y: 2498113.330316742
[2026-01-09 00:19:39] 2026-01-09 05:18:45,246 | INFO     | intersect: -17160909011.928505
[2026-01-09 00:19:39] 2026-01-09 05:18:45,246 | INFO     | chi2: 4.606796759399184
[2026-01-09 00:19:39] 2026-01-09 05:18:45,246 | INFO     | current chi2=4.606796759399184 (change=13.192829880307377 %)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,247 | INFO     | right removable region: 441
[2026-01-09 00:19:39] 2026-01-09 05:18:45,247 | INFO     | sum of square deviations: 26774993719.963894
[2026-01-09 00:19:39] 2026-01-09 05:18:45,253 | INFO     | sum of deviations: 100882473770.819
[2026-01-09 00:19:39] 2026-01-09 05:18:45,253 | INFO     | mean x: 1767922447.0678732
[2026-01-09 00:19:39] 2026-01-09 05:18:45,254 | INFO     | mean y: 2515951.8393665156
[2026-01-09 00:19:39] 2026-01-09 05:18:45,254 | INFO     | intersect: -6658639294.751196
[2026-01-09 00:19:39] 2026-01-09 05:18:45,254 | INFO     | chi2: 2.045412299598654
[2026-01-09 00:19:39] 2026-01-09 05:18:45,254 | INFO     | current chi2=2.045412299598654 (change=61.45771938084612 %)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,255 | INFO     | sum of square deviations: 25876499128.97935
[2026-01-09 00:19:39] 2026-01-09 05:18:45,260 | INFO     | sum of deviations: 24755062389.55151
[2026-01-09 00:19:39] 2026-01-09 05:18:45,260 | INFO     | mean x: 1767922599.5720823
[2026-01-09 00:19:39] 2026-01-09 05:18:45,261 | INFO     | mean y: 2528852.5697940504
[2026-01-09 00:19:39] 2026-01-09 05:18:45,261 | INFO     | intersect: -1688775447.682016
[2026-01-09 00:19:39] 2026-01-09 05:18:45,261 | INFO     | chi2: 0.9815658041582741
[2026-01-09 00:19:39] 2026-01-09 05:18:45,262 | INFO     | current chi2=0.9815658041582741 (change=52.011347328317406 %)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,262 | INFO     | sum of square deviations: 24998410593.916656
[2026-01-09 00:19:39] 2026-01-09 05:18:45,267 | INFO     | sum of deviations: 417387058.8750038
[2026-01-09 00:19:39] 2026-01-09 05:18:45,267 | INFO     | mean x: 1767922752.0694444
[2026-01-09 00:19:39] 2026-01-09 05:18:45,268 | INFO     | mean y: 2533075.9375
[2026-01-09 00:19:39] 2026-01-09 05:18:45,268 | INFO     | intersect: -26985123.83092997
[2026-01-09 00:19:39] 2026-01-09 05:18:45,268 | INFO     | chi2: 0.8794189172163329
[2026-01-09 00:19:39] 2026-01-09 05:18:45,268 | INFO     | current chi2=0.8794189172163329 (change=10.406524606828128 %)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,269 | INFO     | left removable region: 30
[2026-01-09 00:19:39] 2026-01-09 05:18:45,269 | INFO     | sum of square deviations: 21527096764.48648
[2026-01-09 00:19:39] 2026-01-09 05:18:45,274 | INFO     | sum of deviations: 36260272893.46471
[2026-01-09 00:19:39] 2026-01-09 05:18:45,274 | INFO     | mean x: 1767923026.5742092
[2026-01-09 00:19:39] 2026-01-09 05:18:45,274 | INFO     | mean y: 2536183.9683698295
[2026-01-09 00:19:39] 2026-01-09 05:18:45,275 | INFO     | intersect: -2975355916.3717146
[2026-01-09 00:19:39] 2026-01-09 05:18:45,275 | INFO     | chi2: 0.05007410489983333
[2026-01-09 00:19:39] 2026-01-09 05:18:45,276 | INFO     | current memory leak: 1.68 B/s (using 411 data points, chi2=0.05)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,276 | INFO     | could have reported an average CPU frequency of 2958 MHz (18 samples)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | ..............................
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . Timing measurements:
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . get job = 0 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . initial setup = 10 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . payload setup = 59 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . stage-in = 0 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . payload execution = 27250 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . stage-out = 3 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | . log creation = 0 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,277 | INFO     | ..............................
[2026-01-09 00:19:39] 2026-01-09 05:18:45,362 | INFO     | 
[2026-01-09 00:19:39] 2026-01-09 05:18:45,362 | INFO     | job summary report
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | --------------------------------------------------
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | PanDA job id: 6963077484
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | task id: 47898826
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | errors: (none)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | pilot state: finished 
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | transexitcode: 0
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | exeerrorcode: 0
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | exeerrordiag: 
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | exitcode: 0
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | exitmsg: OK
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | cpuconsumptiontime: 55340 s
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | nevents: 400
[2026-01-09 00:19:39] 2026-01-09 05:18:45,363 | INFO     | neventsw: 0
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | pid: 2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | pgrp: 2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | corecount: 8
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | event service: False
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 3: 2284025, 14: 2284053, 25: 2284081, 37: 2284237, 41: 2284527, 49: 2284555, 27311: 2321207, 27316: 2330205, 27319: 233
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | --------------------------------------------------
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | 
[2026-01-09 00:19:39] 2026-01-09 05:18:45,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 00:19:39] 2026-01-09 05:18:45,382 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | job 6963077484 has completed (purged errors)
[2026-01-09 00:19:39] 2026-01-09 05:18:45,385 | INFO     | overall cleanup function is called
[2026-01-09 00:19:39] 2026-01-09 05:18:46,394 | INFO     | --- collectZombieJob: --- 10, [2379531]
[2026-01-09 00:19:39] 2026-01-09 05:18:46,394 | INFO     | zombie collector waiting for pid 2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:46,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 00:19:39] 2026-01-09 05:18:46,394 | INFO     | collected zombie processes
[2026-01-09 00:19:39] 2026-01-09 05:18:46,394 | INFO     | will attempt to kill all subprocesses of pid=2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:46,847 | INFO     | process IDs to be killed: [2379531] (in reverse order)
[2026-01-09 00:19:39] 2026-01-09 05:18:47,080 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 00:19:39] 2026-01-09 05:18:47,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 00:19:39] 2026-01-09 05:18:47,111 | INFO     | did not find any defunct processes belonging to 2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:47,139 | INFO     | did not find any defunct processes belonging to 2379531
[2026-01-09 00:19:39] 2026-01-09 05:18:47,139 | INFO     | ready for new job
[2026-01-09 00:19:39] 2026-01-09 05:18:47,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 00:19:39] 2026-01-09 05:18:47,142 | INFO     | ***************************************
[2026-01-09 00:19:39] 2026-01-09 05:18:47,142 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 00:19:39] 2026-01-09 05:18:47,142 | INFO     | ***************************************
[2026-01-09 00:19:39] 2026-01-09 05:18:47,142 | INFO     | 
[2026-01-09 00:19:39] 2026-01-09 05:18:47,154 | INFO     | architecture information:
[2026-01-09 00:19:39] 2026-01-09 05:18:47,154 | INFO     | executing command: cat /etc/os-release
[2026-01-09 00:19:39] 2026-01-09 05:18:47,181 | INFO     | cat /etc/os-release:
[2026-01-09 00:19:39] NAME="CentOS Linux"
[2026-01-09 00:19:39] VERSION="7 (Core)"
[2026-01-09 00:19:39] ID="centos"
[2026-01-09 00:19:39] ID_LIKE="rhel fedora"
[2026-01-09 00:19:39] VERSION_ID="7"
[2026-01-09 00:19:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 00:19:39] ANSI_COLOR="0;31"
[2026-01-09 00:19:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 00:19:39] HOME_URL="https://www.centos.org/"
[2026-01-09 00:19:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 00:19:39] 
[2026-01-09 00:19:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 00:19:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 00:19:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 00:19:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 00:19:39] 
[2026-01-09 00:19:39] 2026-01-09 05:18:47,181 | INFO     | ***************************************
[2026-01-09 00:19:39] 2026-01-09 05:18:47,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 00:19:39] 2026-01-09 05:18:47,731 | INFO     | sufficient remaining disk space (73801924608 B)
[2026-01-09 00:19:39] 2026-01-09 05:18:47,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 00:19:39] 2026-01-09 05:18:47,731 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 00:19:39] 2026-01-09 05:18:47,732 | INFO     | update_server=False
[2026-01-09 00:19:39] 2026-01-09 05:18:47,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 00:19:39] 2026-01-09 05:18:47,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:19:39] 2026-01-09 05:18:47,732 | INFO     | aborting loop
[2026-01-09 00:19:39] 2026-01-09 05:18:48,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 00:19:39] 2026-01-09 05:18:48,738 | INFO     | [job] retrieve thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:48,743 | INFO     | [job] job monitor thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:48,839 | INFO     | all data control threads have been joined
[2026-01-09 00:19:39] 2026-01-09 05:18:48,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,108 | INFO     | [payload] failed_post thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,125 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,245 | INFO     | all payload control threads have been joined
[2026-01-09 00:19:39] 2026-01-09 05:18:49,460 | INFO     | all job control threads have been joined
[2026-01-09 00:19:39] 2026-01-09 05:18:49,618 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,628 | INFO     | [data] copytool_in thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,676 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:49,845 | INFO     | [data] control thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:50,044 | INFO     | [payload] validate_post thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:50,217 | INFO     | [job] validate thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:50,251 | INFO     | [payload] control thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:50,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:19:39] 2026-01-09 05:18:50,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 00:19:39] 2026-01-09 05:18:50,465 | INFO     | [job] control thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:50,676 | INFO     | [data] copytool_out thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:51,386 | INFO     | [job] queue monitor thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:18:54,410 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 00:19:39] 2026-01-09 05:19:18,299 | INFO     | PID=2366635 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 00:19:39] 2026-01-09 05:19:18,299 | INFO     | .. there are 19 such processes running
[2026-01-09 00:19:39] 2026-01-09 05:19:18,301 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 00:19:39] 2026-01-09 05:19:18,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 00:19:39] 2026-01-09 05:19:18,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 00:19:39] 2026-01-09 05:19:32,668 | INFO     | [monitor] cgroup control has ended
[2026-01-09 00:19:39] 2026-01-09 05:19:32,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425143031616)>', '<ExcThread(monitor, started 140424777799424)>']
[2026-01-09 00:19:39] 2026-01-09 05:19:33,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 00:19:39] 2026-01-09 05:19:33,391 | INFO     | [monitor] control thread has ended
[2026-01-09 00:19:39] 2026-01-09 05:19:38,021 | INFO     | all workflow threads have been joined
[2026-01-09 00:19:39] 2026-01-09 05:19:38,021 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 00:19:39] 2026-01-09 05:19:38,021 | INFO     | traces error code: 0
[2026-01-09 00:19:39] 2026-01-09 05:19:38,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 00:19:39] 2026-01-09 05:19:38,804 [wrapper] ==== pilot stdout END ====
[2026-01-09 00:19:39] 2026-01-09 05:19:38,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 00:19:39] 2026-01-09 05:19:38,854 [wrapper] pilotpid: 2366635
[2026-01-09 00:19:39] 2026-01-09 05:19:38,869 [wrapper] Pilot exit status: 0
[2026-01-09 00:19:39] 2026-01-09 05:19:38,939 [wrapper] pandaids: 6963077484
[2026-01-09 00:19:39] 2026-01-09 05:19:39,014 [wrapper] cleanup supervisor_pilot 3959699 2366636
[2026-01-09 00:19:39] 2026-01-09 05:19:39,017 [wrapper] Test setup, not cleaning
[2026-01-09 00:19:39] 2026-01-09 05:19:39,020 [wrapper] apfmon messages muted
[2026-01-09 00:19:39] 2026-01-09 05:19:39,022 [wrapper] ==== wrapper stdout END ====
[2026-01-09 00:19:39] 2026-01-09 05:19:39,024 [wrapper] ==== wrapper stderr END ====
[2026-01-09 00:19:39]  *** Error codes and diagnostics ***
[2026-01-09 00:19:39]     "exeErrorCode": 0,
[2026-01-09 00:19:39]     "exeErrorDiag": "",
[2026-01-09 00:19:39]     "pilotErrorCode": 0,
[2026-01-09 00:19:39]     "pilotErrorDiag": "",
[2026-01-09 00:19:39]  *** Listing of results directory ***
[2026-01-09 00:19:39] total 455440
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-09 00:19:39] -rwx------. 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas       100 Jan  8 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 00:19:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 16:39 run_atlas
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas       105 Jan  8 16:39 job.xml
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas 228428852 Jan  8 16:39 EVNT.47898824._000961.pool.root.1
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 16:39 start_atlas.sh
[2026-01-09 00:19:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 16:39 shared
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 16:39 input.tar.gz
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas         0 Jan  8 16:39 boinc_lockfile
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 16:40 pandaJob.out
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas        57 Jan  8 16:40 setup.sh.local
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas    989845 Jan  8 16:41 agis_schedconf.cvmfs.json
[2026-01-09 00:19:39] drwx------. 5 boincer umatlas      4096 Jan  8 16:41 pilot3
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas       531 Jan  9 00:17 boinc_task_state.xml
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas 226119249 Jan  9 00:17 HITS.47898826._024139.pool.root.1
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas      1042 Jan  9 00:18 memory_monitor_summary.json
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 00:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas    615302 Jan  9 00:18 log.47898826._024139.job.log.tgz.1
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas      7822 Jan  9 00:18 heartbeat.json
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas        95 Jan  9 00:19 pilot_heartbeat.json
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas      6876 Jan  9 00:19 init_data.xml
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas      4824 Jan  9 00:19 pilotlog.txt
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 00:19 boinc_mmap_file
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas        28 Jan  9 00:19 wrapper_checkpoint.txt
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas   3340698 Jan  9 00:19 log.47898826._024139.job.log.1
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas       357 Jan  9 00:19 output.list
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 00:19 runtime_log
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas   3973120 Jan  9 00:19 result.tar.gz
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas       657 Jan  9 00:19 TqFLDmb22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm41eKDm7S8Mun.diag
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 00:19 runtime_log.err
[2026-01-09 00:19:39] -rw-r--r--. 1 boincer umatlas     21246 Jan  9 00:19 stderr.txt
[2026-01-09 00:19:39] HITS file was successfully produced:
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas 226119249 Jan  9 00:17 shared/HITS.pool.root.1
[2026-01-09 00:19:39]  *** Contents of shared directory: ***
[2026-01-09 00:19:39] total 448376
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas 228428852 Jan  8 16:39 ATLAS.root_0
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 16:39 start_atlas.sh
[2026-01-09 00:19:39] -rw-r--r--. 2 boincer umatlas    592396 Jan  8 16:39 input.tar.gz
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas 226119249 Jan  9 00:17 HITS.pool.root.1
[2026-01-09 00:19:39] -rw-------. 1 boincer umatlas   3973120 Jan  9 00:19 result.tar.gz
00:19:40 (2360500): run_atlas exited; CPU time 56266.336143
00:19:40 (2360500): called boinc_finish(0)

</stderr_txt>
]]>

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