Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:51:39 (17578): wrapper (7.7.26015): starting
12:51:39 (17578): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 12:51:39] Arguments: --nthreads 12
[2026-01-08 12:51:39] Threads: 12
[2026-01-08 12:51:39] Checking for CVMFS
[2026-01-08 12:51:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:51:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:51:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:51:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:51:40] 2.11.2.0 2910 101145 97024 154915 3 82 14374687 20275200 1 130560 0 24762015 99.952 3767144 35445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 12:51:40] CVMFS is ok
[2026-01-08 12:51:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:51:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:51:40] Further information can be found at the LHC@home message board.
[2026-01-08 12:51:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:51:40] Checking for apptainer binary...
[2026-01-08 12:51:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:51:40] Running /usr/bin/apptainer --version
[2026-01-08 12:51:40] apptainer version 1.3.2-1.el7
[2026-01-08 12:51:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:51:41] c-205-11.aglt2.org
[2026-01-08 12:51:41] apptainer works
[2026-01-08 12:51:41] Set ATHENA_PROC_NUMBER=12
[2026-01-08 12:51:41] Set ATHENA_CORE_NUMBER=12
[2026-01-08 12:51:41] Starting ATLAS job with PandaID=6963076193
[2026-01-08 12:51:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:32:34]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:32:34]  status=None
[2026-01-08 14:32:34]  status_code=0
[2026-01-08 14:32:34]  storage_token=
[2026-01-08 14:32:34]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963076193/log.47898826._023633.job.log.tgz.1
[2026-01-08 14:32:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/54/log.47898826._023633.job.log.tgz.1
[2026-01-08 14:32:34]  workdir=None
[2026-01-08 14:32:34] ]
[2026-01-08 14:32:34] 2026-01-08 19:31:53,647 | INFO     | transferring file log.47898826._023633.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963076193/log.47898826._023633.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-08 14:32:34] 2026-01-08 19:31:53,647 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963076193/log.47898826._023633.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._023633.job
[2026-01-08 14:32:34] 2026-01-08 19:31:53,672 | INFO     | adding to output.list: log.47898826._023633.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/54/log.47898826._023633.job.log.tg
[2026-01-08 14:32:34] 2026-01-08 19:31:53,673 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 14:32:34] 2026-01-08 19:31:53,673 | INFO     | summary of transferred files:
[2026-01-08 14:32:34] 2026-01-08 19:31:53,673 | INFO     |  -- lfn=log.47898826._023633.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 14:32:34] 2026-01-08 19:31:53,673 | INFO     | stage-out finished correctly
[2026-01-08 14:32:34] 2026-01-08 19:31:53,754 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 14:32:34] 2026-01-08 19:31:54,228 | WARNING  | process 27670 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 14:32:34] 2026-01-08 19:31:54,228 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076193/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:32:34] 2026-01-08 19:31:54,315 | INFO     | number of running child processes to parent process 27670: 1
[2026-01-08 14:32:34] 2026-01-08 19:31:54,315 | INFO     | maximum number of monitored processes: 6
[2026-01-08 14:32:34] 2026-01-08 19:31:54,790 | INFO     | time since job start (5997s) is within the limit (174528.0s)
[2026-01-08 14:32:34] 2026-01-08 19:31:55,904 | INFO     | PID=21252 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 14:32:34] 2026-01-08 19:31:56,035 | INFO     | job 6963076193 has state=finished
[2026-01-08 14:32:34] 2026-01-08 19:31:56,035 | INFO     | preparing for final server update for job 6963076193 in state='finished'
[2026-01-08 14:32:34] 2026-01-08 19:31:56,035 | INFO     | this job has now completed (state=finished)
[2026-01-08 14:32:34] 2026-01-08 19:31:56,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 14:32:34] 2026-01-08 19:31:56,036 | INFO     | log transfer has been attempted: DONE
[2026-01-08 14:32:34] 2026-01-08 19:31:56,036 | INFO     | job 6963076193 has finished - writing final server update
[2026-01-08 14:32:34] 2026-01-08 19:31:56,036 | INFO     | total number of processed events: 400 (read)
[2026-01-08 14:32:34] 2026-01-08 19:31:56,037 | INFO     | executing command: lscpu
[2026-01-08 14:32:34] 2026-01-08 19:31:56,062 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 14:32:34] 2026-01-08 19:31:56,818 | INFO     | monitor loop #444: job 0:6963076193 is in state 'finished'
[2026-01-08 14:32:34] 2026-01-08 19:31:56,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:32:34] 2026-01-08 19:31:56,905 | INFO     | time since job start (5999s) is within the limit (174528.0s)
[2026-01-08 14:32:34] 2026-01-08 19:31:58,910 | INFO     | time since job start (6001s) is within the limit (174528.0s)
[2026-01-08 14:32:34] 2026-01-08 19:31:59,321 | INFO     | monitor loop #445: job 0:6963076193 is in state 'finished'
[2026-01-08 14:32:34] 2026-01-08 19:31:59,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:32:34] 2026-01-08 19:32:00,911 | INFO     | time since job start (6003s) is within the limit (174528.0s)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,824 | INFO     | monitor loop #446: job 0:6963076193 is in state 'finished'
[2026-01-08 14:32:34] 2026-01-08 19:32:01,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,889 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 14:32:34] 2026-01-08 19:32:01,892 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1828.8333333333333
[2026-01-08 14:32:34] 2026-01-08 19:32:01,895 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963076193/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,896 | INFO     | extracted standard info from prmon json
[2026-01-08 14:32:34] 2026-01-08 19:32:01,896 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:32:34] 2026-01-08 19:32:01,896 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:32:34] 2026-01-08 19:32:01,897 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:32:34] 2026-01-08 19:32:01,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:32:34] 2026-01-08 19:32:01,899 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:32:34] 2026-01-08 19:32:01,899 | INFO     | sum of square deviations: 233641590.0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | sum of deviations: -6155830982.0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | mean x: 1767897796.0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | mean y: 2730888.3296703296
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | intersect: 46582109267.09484
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | chi2: 0.10694974521260084
[2026-01-08 14:32:34] 2026-01-08 19:32:01,900 | INFO     | current memory leak: -26.35 B/s (using 91 data points, chi2=0.11)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | could have reported an average CPU frequency of 2134 MHz (7 samples)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | ..............................
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | . Timing measurements:
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | . get job = 0 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | . initial setup = 2 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | . payload setup = 7 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,901 | INFO     | . stage-in = 0 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,902 | INFO     | . payload execution = 5969 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,902 | INFO     | . stage-out = 0 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,902 | INFO     | . log creation = 0 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,902 | INFO     | ..............................
[2026-01-08 14:32:34] 2026-01-08 19:32:01,982 | INFO     | 
[2026-01-08 14:32:34] 2026-01-08 19:32:01,982 | INFO     | job summary report
[2026-01-08 14:32:34] 2026-01-08 19:32:01,982 | INFO     | --------------------------------------------------
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | PanDA job id: 6963076193
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | task id: 47898826
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | errors: (none)
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | pilot state: finished 
[2026-01-08 14:32:34] 2026-01-08 19:32:01,983 | INFO     | transexitcode: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | exeerrorcode: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | exeerrordiag: 
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | exitcode: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | exitmsg: OK
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | cpuconsumptiontime: 65158 s
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | nevents: 400
[2026-01-08 14:32:34] 2026-01-08 19:32:01,984 | INFO     | neventsw: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | pid: 27670
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | pgrp: 27670
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | corecount: 12
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | event service: False
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | sizes: {0: 2283141, 1: 2283997, 6: 2284259, 12: 2284287, 5979: 2311010, 5980: 2320192, 5988: 2320330}
[2026-01-08 14:32:34] 2026-01-08 19:32:01,985 | INFO     | --------------------------------------------------
[2026-01-08 14:32:34] 2026-01-08 19:32:01,986 | INFO     | 
[2026-01-08 14:32:34] 2026-01-08 19:32:01,986 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 14:32:34] 2026-01-08 19:32:02,010 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,011 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,011 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,011 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:32:34] 2026-01-08 19:32:02,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,014 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:32:34] 2026-01-08 19:32:02,014 | INFO     | job 6963076193 has completed (purged errors)
[2026-01-08 14:32:34] 2026-01-08 19:32:02,014 | INFO     | overall cleanup function is called
[2026-01-08 14:32:34] 2026-01-08 19:32:03,022 | INFO     | --- collectZombieJob: --- 10, [27670]
[2026-01-08 14:32:34] 2026-01-08 19:32:03,022 | INFO     | zombie collector waiting for pid 27670
[2026-01-08 14:32:34] 2026-01-08 19:32:03,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:32:34] 2026-01-08 19:32:03,022 | INFO     | collected zombie processes
[2026-01-08 14:32:34] 2026-01-08 19:32:03,023 | INFO     | will attempt to kill all subprocesses of pid=27670
[2026-01-08 14:32:34] 2026-01-08 19:32:03,111 | INFO     | process IDs to be killed: [27670] (in reverse order)
[2026-01-08 14:32:34] 2026-01-08 19:32:03,211 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:32:34] 2026-01-08 19:32:03,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:32:34] 2026-01-08 19:32:03,215 | INFO     | did not find any defunct processes belonging to 27670
[2026-01-08 14:32:34] 2026-01-08 19:32:03,218 | INFO     | did not find any defunct processes belonging to 27670
[2026-01-08 14:32:34] 2026-01-08 19:32:03,218 | INFO     | ready for new job
[2026-01-08 14:32:34] 2026-01-08 19:32:03,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:32:34] 2026-01-08 19:32:03,219 | INFO     | ***************************************
[2026-01-08 14:32:34] 2026-01-08 19:32:03,219 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:32:34] 2026-01-08 19:32:03,219 | INFO     | ***************************************
[2026-01-08 14:32:34] 2026-01-08 19:32:03,220 | INFO     | 
[2026-01-08 14:32:34] 2026-01-08 19:32:03,220 | INFO     | architecture information:
[2026-01-08 14:32:34] 2026-01-08 19:32:03,221 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:32:34] 2026-01-08 19:32:03,236 | INFO     | cat /etc/os-release:
[2026-01-08 14:32:34] NAME="CentOS Linux"
[2026-01-08 14:32:34] VERSION="7 (Core)"
[2026-01-08 14:32:34] ID="centos"
[2026-01-08 14:32:34] ID_LIKE="rhel fedora"
[2026-01-08 14:32:34] VERSION_ID="7"
[2026-01-08 14:32:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:32:34] ANSI_COLOR="0;31"
[2026-01-08 14:32:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:32:34] HOME_URL="https://www.centos.org/"
[2026-01-08 14:32:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:32:34] 
[2026-01-08 14:32:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:32:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:32:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:32:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:32:34] 
[2026-01-08 14:32:34] 2026-01-08 19:32:03,237 | INFO     | ***************************************
[2026-01-08 14:32:34] 2026-01-08 19:32:03,740 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 14:32:34] 2026-01-08 19:32:03,757 | INFO     | sufficient remaining disk space (29342302208 B)
[2026-01-08 14:32:34] 2026-01-08 19:32:03,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:32:34] 2026-01-08 19:32:03,758 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:32:34] 2026-01-08 19:32:03,758 | INFO     | update_server=False
[2026-01-08 14:32:34] 2026-01-08 19:32:03,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:32:34] 2026-01-08 19:32:03,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:32:34] 2026-01-08 19:32:03,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:32:34] 2026-01-08 19:32:03,759 | INFO     | aborting loop
[2026-01-08 14:32:34] 2026-01-08 19:32:04,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:32:34] 2026-01-08 19:32:04,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:32:34] 2026-01-08 19:32:04,656 | INFO     | all data control threads have been joined
[2026-01-08 14:32:34] 2026-01-08 19:32:04,764 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:04,765 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:04,765 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,042 | INFO     | all payload control threads have been joined
[2026-01-08 14:32:34] 2026-01-08 19:32:05,096 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,158 | INFO     | all job control threads have been joined
[2026-01-08 14:32:34] 2026-01-08 19:32:05,330 | INFO     | [job] validate thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,534 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,536 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,546 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,661 | INFO     | [data] control thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,821 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:05,876 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:06,047 | INFO     | [payload] control thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:06,163 | INFO     | [job] control thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:06,163 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:06,278 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:06,326 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:32:34] 2026-01-08 19:32:08,346 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:32:34] 2026-01-08 19:32:08,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791369697088)>', '<ExcThread(monitor, started 139790540318464)>']
[2026-01-08 14:32:34] 2026-01-08 19:32:13,830 | INFO     | all workflow threads have been joined
[2026-01-08 14:32:34] 2026-01-08 19:32:13,830 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:32:34] 2026-01-08 19:32:13,830 | INFO     | traces error code: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:13,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:32:34] 2026-01-08 19:32:34,120 | INFO     | PID=21252 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 14:32:34] 2026-01-08 19:32:34,121 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:32:34] 2026-01-08 19:32:34,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:32:34] 2026-01-08 19:32:34,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:32:34] 2026-01-08 19:32:34,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:32:34] 2026-01-08 19:32:34,122 | INFO     | [monitor] control thread has ended
[2026-01-08 14:32:34] 2026-01-08 19:32:34,204 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:32:34] 2026-01-08 19:32:34,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:32:34] 2026-01-08 19:32:34,211 [wrapper] pilotpid: 21252
[2026-01-08 14:32:34] 2026-01-08 19:32:34,215 [wrapper] Pilot exit status: 0
[2026-01-08 14:32:34] 2026-01-08 19:32:34,230 [wrapper] pandaids: 6963076193
[2026-01-08 14:32:34] 2026-01-08 19:32:34,271 [wrapper] cleanup supervisor_pilot 25970 21253
[2026-01-08 14:32:34] 2026-01-08 19:32:34,275 [wrapper] Test setup, not cleaning
[2026-01-08 14:32:34] 2026-01-08 19:32:34,278 [wrapper] apfmon messages muted
[2026-01-08 14:32:34] 2026-01-08 19:32:34,282 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:32:34] 2026-01-08 19:32:34,286 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:32:34]  *** Error codes and diagnostics ***
[2026-01-08 14:32:34]     "exeErrorCode": 0,
[2026-01-08 14:32:34]     "exeErrorDiag": "",
[2026-01-08 14:32:34]     "pilotErrorCode": 0,
[2026-01-08 14:32:34]     "pilotErrorDiag": "",
[2026-01-08 14:32:34]  *** Listing of results directory ***
[2026-01-08 14:32:34] total 443880
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 06:06 pilot3.tar.gz
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 06:07 queuedata.json
[2026-01-08 14:32:34] -rwx------ 1 boincer umatlas     36322 Jan  8 06:07 runpilot2-wrapper.sh
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas       100 Jan  8 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:32:34] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 12:51 run_atlas
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas       105 Jan  8 12:51 job.xml
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas 224708151 Jan  8 12:51 EVNT.47898824._000853.pool.root.1
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 12:51 start_atlas.sh
[2026-01-08 14:32:34] drwxrwx--x 2 boincer umatlas      4096 Jan  8 12:51 shared
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas    592401 Jan  8 12:51 input.tar.gz
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas         0 Jan  8 12:51 boinc_lockfile
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 12:51 pandaJob.out
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas    989837 Jan  8 12:51 agis_schedconf.cvmfs.json
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas   1516240 Jan  8 12:51 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:32:34] drwx------ 5 boincer umatlas      4096 Jan  8 12:51 pilot3
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas      5868 Jan  8 14:28 init_data.xml
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas 223411283 Jan  8 14:31 HITS.47898826._023633.pool.root.1
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas       529 Jan  8 14:31 boinc_task_state.xml
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas      1046 Jan  8 14:31 memory_monitor_summary.json
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas    401465 Jan  8 14:31 log.47898826._023633.job.log.tgz.1
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas      7849 Jan  8 14:32 heartbeat.json
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 14:32 boinc_mmap_file
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas        27 Jan  8 14:32 wrapper_checkpoint.txt
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas       745 Jan  8 14:32 pilotlog.txt
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas        95 Jan  8 14:32 pilot_heartbeat.json
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas    853502 Jan  8 14:32 log.47898826._023633.job.log.1
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas       357 Jan  8 14:32 output.list
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas       620 Jan  8 14:32 runtime_log
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas   1269760 Jan  8 14:32 result.tar.gz
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas       660 Jan  8 14:32 ZXENDmO22x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbzeKDmnHYtIm.diag
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas      8819 Jan  8 14:32 runtime_log.err
[2026-01-08 14:32:34] -rw-r--r-- 1 boincer umatlas     22194 Jan  8 14:32 stderr.txt
[2026-01-08 14:32:34] HITS file was successfully produced:
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas 223411283 Jan  8 14:31 shared/HITS.pool.root.1
[2026-01-08 14:32:34]  *** Contents of shared directory: ***
[2026-01-08 14:32:34] total 439460
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas 224708151 Jan  8 12:51 ATLAS.root_0
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 12:51 start_atlas.sh
[2026-01-08 14:32:34] -rw-r--r-- 2 boincer umatlas    592401 Jan  8 12:51 input.tar.gz
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas 223411283 Jan  8 14:31 HITS.pool.root.1
[2026-01-08 14:32:34] -rw------- 1 boincer umatlas   1269760 Jan  8 14:32 result.tar.gz
14:32:36 (17578): run_atlas exited; CPU time 65106.496865
14:32:36 (17578): called boinc_finish(0)

</stderr_txt>
]]>

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