Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:56 (24814): wrapper (7.7.26015): starting
01:01:56 (24814): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:01:56] Arguments: --nthreads 8
[2026-01-09 01:01:56] Threads: 8
[2026-01-09 01:01:56] Checking for CVMFS
[2026-01-09 01:01:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:01:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:01:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:01:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:01:59] 2.11.2.0 2053 34660 102880 154924 2 100 24227860 25165825 1088 130560 0 6847257 99.656 9355164 4160 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 01:01:59] CVMFS is ok
[2026-01-09 01:01:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:01:59] Checking for apptainer binary...
[2026-01-09 01:01:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:01:59] Running /usr/bin/apptainer --version
[2026-01-09 01:01:59] apptainer version 1.3.2-1.el7
[2026-01-09 01:01:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:02:16] cg-vwn436.simple-grid.lan
[2026-01-09 01:02:16] apptainer works
[2026-01-09 01:02:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:02:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:02:16] Starting ATLAS job with PandaID=6963074865
[2026-01-09 01:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:39:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:39:11] 2026-01-09 04:38:09,716 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:39:11] 2026-01-09 04:38:09,717 | INFO     | sum of square deviations: 5325139844.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,719 | INFO     | sum of deviations: 68316070379.99999
[2026-01-09 05:39:11] 2026-01-09 04:38:09,719 | INFO     | mean x: 1767925578.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,719 | INFO     | mean y: 2481302.992248062
[2026-01-09 05:39:11] 2026-01-09 04:38:09,720 | INFO     | intersect: -22678186580.71636
[2026-01-09 05:39:11] 2026-01-09 04:38:09,720 | INFO     | chi2: 6.287053640624046
[2026-01-09 05:39:11] 2026-01-09 04:38:09,721 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,723 | INFO     | sum of deviations: 67188862970.00001
[2026-01-09 05:39:11] 2026-01-09 04:38:09,723 | INFO     | mean x: 1767925426.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,724 | INFO     | mean y: 2480736.822134387
[2026-01-09 05:39:11] 2026-01-09 04:38:09,724 | INFO     | sufficient remaining disk space (498143854592 B)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,724 | INFO     | intersect: -23652795879.035435
[2026-01-09 05:39:11] 2026-01-09 04:38:09,725 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,725 | INFO     | chi2: 6.295477464198503
[2026-01-09 05:39:11] 2026-01-09 04:38:09,726 | INFO     | current chi2=6.295477464198503 (change=-0.13398682524396288 %)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,726 | INFO     | right removable region: 252
[2026-01-09 05:39:11] 2026-01-09 04:38:09,726 | INFO     | sum of square deviations: 5021496942.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,728 | INFO     | sum of deviations: -20452930828.000004
[2026-01-09 05:39:11] 2026-01-09 04:38:09,729 | INFO     | mean x: 1767925731.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,729 | INFO     | mean y: 2525851.695652174
[2026-01-09 05:39:11] 2026-01-09 04:38:09,729 | INFO     | intersect: 7203418952.46543
[2026-01-09 05:39:11] 2026-01-09 04:38:09,729 | INFO     | chi2: 1.6180976156000688
[2026-01-09 05:39:11] 2026-01-09 04:38:09,730 | INFO     | current chi2=1.6180976156000688 (change=74.26302194807649 %)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,730 | INFO     | sum of square deviations: 4729621702.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,732 | INFO     | sum of deviations: -63685863458.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,733 | INFO     | mean x: 1767925883.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,733 | INFO     | mean y: 2548313.7217741935
[2026-01-09 05:39:11] 2026-01-09 04:38:09,733 | INFO     | intersect: 23808233739.623302
[2026-01-09 05:39:11] 2026-01-09 04:38:09,733 | INFO     | chi2: 0.26023101074676613
[2026-01-09 05:39:11] 2026-01-09 04:38:09,733 | INFO     | current chi2=0.26023101074676613 (change=83.91747146538746 %)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,734 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,736 | INFO     | sum of deviations: -65410963924.00001
[2026-01-09 05:39:11] 2026-01-09 04:38:09,736 | INFO     | mean x: 1767926036.0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,736 | INFO     | mean y: 2549224.069958848
[2026-01-09 05:39:11] 2026-01-09 04:38:09,737 | INFO     | intersect: 25993654653.035915
[2026-01-09 05:39:11] 2026-01-09 04:38:09,737 | INFO     | chi2: 0.2317180631442021
[2026-01-09 05:39:11] 2026-01-09 04:38:09,737 | INFO     | current chi2=0.2317180631442021 (change=10.956783175357346 %)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,737 | INFO     | left removable region: 30
[2026-01-09 05:39:11] 2026-01-09 04:38:09,738 | INFO     | sum of square deviations: 3392567795.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,740 | INFO     | sum of deviations: -43682945825.99997
[2026-01-09 05:39:11] 2026-01-09 04:38:09,740 | INFO     | mean x: 1767926310.5
[2026-01-09 05:39:11] 2026-01-09 04:38:09,740 | INFO     | mean y: 2537730.081081081
[2026-01-09 05:39:11] 2026-01-09 04:38:09,740 | INFO     | intersect: 22766483478.8939
[2026-01-09 05:39:11] 2026-01-09 04:38:09,741 | INFO     | chi2: 0.20904500686402655
[2026-01-09 05:39:11] 2026-01-09 04:38:09,741 | INFO     | current memory leak: -12.88 B/s (using 222 data points, chi2=0.21)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,742 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,742 | INFO     | ..............................
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . Timing measurements:
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . get job = 0 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . initial setup = 19 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . payload setup = 143 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . stage-in = 0 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . payload execution = 15920 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . stage-out = 1 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,743 | INFO     | . log creation = 0 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,744 | INFO     | ..............................
[2026-01-09 05:39:11] 2026-01-09 04:38:09,783 | INFO     | size of work directory /var/lib/boinc/slots/8/PanDA_Pilot-6963074865: 3385930 B (within 4404019200 B limit)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,794 | INFO     | pfn file=/var/lib/boinc/slots/8/PanDA_Pilot-6963074865/HITS.47898826._023231.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,794 | INFO     | total size of present files: 0 B (workdir size: 3385930 B)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,794 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/8/PanDA_Pilot-6963074865/HITS.47898826._023231.pool.root.1 since it does not exist
[2026-01-09 05:39:11] 2026-01-09 04:38:09,862 | INFO     | 
[2026-01-09 05:39:11] 2026-01-09 04:38:09,862 | INFO     | job summary report
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | --------------------------------------------------
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | PanDA job id: 6963074865
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | task id: 47898826
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | errors: (none)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | pilot state: finished 
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | transexitcode: 0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | exeerrorcode: 0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,863 | INFO     | exeerrordiag: 
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | exitcode: 0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | exitmsg: OK
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | cpuconsumptiontime: 77776 s
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | nevents: 400
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | neventsw: 0
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | pid: 2731
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | pgrp: 2731
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | corecount: 8
[2026-01-09 05:39:11] 2026-01-09 04:38:09,864 | INFO     | event service: False
[2026-01-09 05:39:11] 2026-01-09 04:38:09,865 | INFO     | sizes: {0: 2283798, 1: 2283997, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 55: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 98: 2284713, 10
[2026-01-09 05:39:11] 2026-01-09 04:38:09,865 | INFO     | --------------------------------------------------
[2026-01-09 05:39:11] 2026-01-09 04:38:09,865 | INFO     | 
[2026-01-09 05:39:11] 2026-01-09 04:38:09,865 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 05:39:11] 2026-01-09 04:38:09,897 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,898 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,898 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,898 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,900 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:39:11] 2026-01-09 04:38:09,901 | INFO     | job 6963074865 has completed (purged errors)
[2026-01-09 05:39:11] 2026-01-09 04:38:09,901 | INFO     | overall cleanup function is called
[2026-01-09 05:39:11] 2026-01-09 04:38:09,936 | INFO     | number of running child processes to parent process 2731: 1
[2026-01-09 05:39:11] 2026-01-09 04:38:09,936 | INFO     | maximum number of monitored processes: 8
[2026-01-09 05:39:11] 2026-01-09 04:38:09,936 | INFO     | aborting job monitoring since job object (job id=6963074865) has expired
[2026-01-09 05:39:11] 2026-01-09 04:38:10,910 | INFO     | --- collectZombieJob: --- 10, [2731]
[2026-01-09 05:39:11] 2026-01-09 04:38:10,911 | INFO     | zombie collector waiting for pid 2731
[2026-01-09 05:39:11] 2026-01-09 04:38:10,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:39:11] 2026-01-09 04:38:10,911 | INFO     | collected zombie processes
[2026-01-09 05:39:11] 2026-01-09 04:38:10,911 | INFO     | will attempt to kill all subprocesses of pid=2731
[2026-01-09 05:39:11] 2026-01-09 04:38:10,971 | INFO     | process IDs to be killed: [2731] (in reverse order)
[2026-01-09 05:39:11] 2026-01-09 04:38:11,019 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:39:11] 2026-01-09 04:38:11,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:39:11] 2026-01-09 04:38:11,022 | INFO     | did not find any defunct processes belonging to 2731
[2026-01-09 05:39:11] 2026-01-09 04:38:11,023 | INFO     | did not find any defunct processes belonging to 2731
[2026-01-09 05:39:11] 2026-01-09 04:38:11,023 | INFO     | ready for new job
[2026-01-09 05:39:11] 2026-01-09 04:38:11,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:39:11] 2026-01-09 04:38:11,025 | INFO     | ***************************************
[2026-01-09 05:39:11] 2026-01-09 04:38:11,026 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:39:11] 2026-01-09 04:38:11,026 | INFO     | ***************************************
[2026-01-09 05:39:11] 2026-01-09 04:38:11,026 | INFO     | 
[2026-01-09 05:39:11] 2026-01-09 04:38:11,026 | INFO     | pilot is running in a VM
[2026-01-09 05:39:11] 2026-01-09 04:38:11,027 | INFO     | architecture information:
[2026-01-09 05:39:11] 2026-01-09 04:38:11,028 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:39:11] 2026-01-09 04:38:11,053 | INFO     | cat /etc/os-release:
[2026-01-09 05:39:11] NAME="CentOS Linux"
[2026-01-09 05:39:11] VERSION="7 (Core)"
[2026-01-09 05:39:11] ID="centos"
[2026-01-09 05:39:11] ID_LIKE="rhel fedora"
[2026-01-09 05:39:11] VERSION_ID="7"
[2026-01-09 05:39:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:39:11] ANSI_COLOR="0;31"
[2026-01-09 05:39:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:39:11] HOME_URL="https://www.centos.org/"
[2026-01-09 05:39:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:39:11] 
[2026-01-09 05:39:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:39:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:39:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:39:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:39:11] 
[2026-01-09 05:39:11] 2026-01-09 04:38:11,054 | INFO     | ***************************************
[2026-01-09 05:39:11] 2026-01-09 04:38:11,557 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 05:39:11] 2026-01-09 04:38:11,582 | INFO     | sufficient remaining disk space (498151194624 B)
[2026-01-09 05:39:11] 2026-01-09 04:38:11,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:39:11] 2026-01-09 04:38:11,582 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:39:11] 2026-01-09 04:38:11,583 | INFO     | update_server=False
[2026-01-09 05:39:11] 2026-01-09 04:38:11,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:39:11] 2026-01-09 04:38:11,583 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:11] 2026-01-09 04:38:11,584 | INFO     | aborting loop
[2026-01-09 05:39:11] 2026-01-09 04:38:11,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:39:11] 2026-01-09 04:38:11,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:11] 2026-01-09 04:38:12,012 | INFO     | all data control threads have been joined
[2026-01-09 05:39:11] 2026-01-09 04:38:12,471 | INFO     | all payload control threads have been joined
[2026-01-09 05:39:11] 2026-01-09 04:38:12,588 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:12,590 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:12,591 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:12,860 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:12,999 | INFO     | all job control threads have been joined
[2026-01-09 05:39:11] 2026-01-09 04:38:13,018 | INFO     | [data] control thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,199 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,453 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,477 | INFO     | [payload] control thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,525 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,591 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,762 | INFO     | [job] validate thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:13,788 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:14,005 | INFO     | [job] control thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:14,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:39:11] 2026-01-09 04:38:14,095 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:18,036 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:22,143 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:39:11] 2026-01-09 04:38:23,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:39:11] 2026-01-09 04:38:42,076 | INFO     | PID=28583 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:39:11] 2026-01-09 04:38:42,077 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:39:11] 2026-01-09 04:38:42,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:39:11] 2026-01-09 04:38:42,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:39:11] 2026-01-09 04:39:04,696 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:39:11] 2026-01-09 04:39:05,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673126156096)>', '<ExcThread(monitor, started 139672395179776)>']
[2026-01-09 05:39:11] 2026-01-09 04:39:06,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:39:11] 2026-01-09 04:39:06,201 | INFO     | [monitor] control thread has ended
[2026-01-09 05:39:11] 2026-01-09 04:39:10,875 | INFO     | all workflow threads have been joined
[2026-01-09 05:39:11] 2026-01-09 04:39:10,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:39:11] 2026-01-09 04:39:10,876 | INFO     | traces error code: 0
[2026-01-09 05:39:11] 2026-01-09 04:39:10,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:39:11] 2026-01-09 04:39:11,021 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:39:11] 2026-01-09 04:39:11,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:39:11] 2026-01-09 04:39:11,029 [wrapper] pilotpid: 28583
[2026-01-09 05:39:11] 2026-01-09 04:39:11,033 [wrapper] Pilot exit status: 0
[2026-01-09 05:39:11] 2026-01-09 04:39:11,050 [wrapper] pandaids: 6963074865
[2026-01-09 05:39:11] 2026-01-09 04:39:11,087 [wrapper] cleanup supervisor_pilot 13620 28584
[2026-01-09 05:39:11] 2026-01-09 04:39:11,094 [wrapper] Test setup, not cleaning
[2026-01-09 05:39:11] 2026-01-09 04:39:11,101 [wrapper] apfmon messages muted
[2026-01-09 05:39:11] 2026-01-09 04:39:11,105 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:39:11] 2026-01-09 04:39:11,110 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:39:11]  *** Error codes and diagnostics ***
[2026-01-09 05:39:11]     "exeErrorCode": 0,
[2026-01-09 05:39:11]     "exeErrorDiag": "",
[2026-01-09 05:39:11]     "pilotErrorCode": 0,
[2026-01-09 05:39:11]     "pilotErrorDiag": "",
[2026-01-09 05:39:11]  *** Listing of results directory ***
[2026-01-09 05:39:11] total 440832
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:06 pilot3.tar.gz
[2026-01-09 05:39:11] -rwx------. 1 boinc boinc     36322 Jan  8 12:06 runpilot2-wrapper.sh
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:07 queuedata.json
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc       100 Jan  9 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:39:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 01:01 run_atlas
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc       105 Jan  9 01:01 job.xml
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc 226389714 Jan  9 01:01 EVNT.47898824._000926.pool.root.1
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:01 start_atlas.sh
[2026-01-09 05:39:11] drwxrwx--x. 2 boinc boinc        68 Jan  9 01:01 shared
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc    592396 Jan  9 01:01 input.tar.gz
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc      6388 Jan  9 01:01 init_data.xml
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc         0 Jan  9 01:01 boinc_lockfile
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc      2519 Jan  9 01:02 pandaJob.out
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc    989837 Jan  9 01:06 agis_schedconf.cvmfs.json
[2026-01-09 05:39:11] drwx------. 5 boinc boinc      4096 Jan  9 01:06 pilot3
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc 215815065 Jan  9 05:37 HITS.47898826._023231.pool.root.1
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc       531 Jan  9 05:37 boinc_task_state.xml
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc      1021 Jan  9 05:37 memory_monitor_summary.json
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc   1516240 Jan  9 05:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc    474239 Jan  9 05:38 log.47898826._023231.job.log.tgz.1
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc      7791 Jan  9 05:38 heartbeat.json
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc        95 Jan  9 05:38 pilot_heartbeat.json
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:38 boinc_mmap_file
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:38 wrapper_checkpoint.txt
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc      4881 Jan  9 05:39 pilotlog.txt
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc   2179114 Jan  9 05:39 log.47898826._023231.job.log.1
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc       357 Jan  9 05:39 output.list
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:39 runtime_log
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc   2672640 Jan  9 05:39 result.tar.gz
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:39 runtime_log.err
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc       657 Jan  9 05:39 HtCODm112x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbAkKDmx0DIVm.diag
[2026-01-09 05:39:11] -rw-r--r--. 1 boinc boinc     21068 Jan  9 05:39 stderr.txt
[2026-01-09 05:39:11] HITS file was successfully produced:
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc 215815065 Jan  9 05:37 shared/HITS.pool.root.1
[2026-01-09 05:39:11]  *** Contents of shared directory: ***
[2026-01-09 05:39:11] total 435052
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc 226389714 Jan  9 01:01 ATLAS.root_0
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:01 start_atlas.sh
[2026-01-09 05:39:11] -rw-r--r--. 2 boinc boinc    592396 Jan  9 01:01 input.tar.gz
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc 215815065 Jan  9 05:37 HITS.pool.root.1
[2026-01-09 05:39:11] -rw-------. 1 boinc boinc   2672640 Jan  9 05:39 result.tar.gz
05:39:12 (24814): run_atlas exited; CPU time 77944.254928
05:39:12 (24814): called boinc_finish(0)

</stderr_txt>
]]>

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