Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:20 (1308146): wrapper (7.7.26015): starting
20:39:20 (1308146): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 20:39:20] Arguments: --nthreads 8
[2026-01-08 20:39:20] Threads: 8
[2026-01-08 20:39:20] Checking for CVMFS
[2026-01-08 20:39:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:39:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:39:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:39:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:39:24] 2.13.3.0 9735 92762 386292 154926 0 643 26287806 32935936 26556 16776704 0 397874567 99.688 317733980 32962 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 20:39:24] CVMFS is ok
[2026-01-08 20:39:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:39:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:39:24] Further information can be found at the LHC@home message board.
[2026-01-08 20:39:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:39:24] Checking for apptainer binary...
[2026-01-08 20:39:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 20:39:24] Running /usr/bin/apptainer --version
[2026-01-08 20:39:24] apptainer version 1.4.5-2.el9
[2026-01-08 20:39:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:39:45] c-8-15.aglt2.org
[2026-01-08 20:39:45] apptainer works
[2026-01-08 20:39:45] Set ATHENA_PROC_NUMBER=8
[2026-01-08 20:39:45] Set ATHENA_CORE_NUMBER=8
[2026-01-08 20:39:46] Starting ATLAS job with PandaID=6962315441
[2026-01-08 20:39:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:01:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:01:59] 2026-01-09 20:00:44,480 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.182375
[2026-01-09 15:01:59] 2026-01-09 20:00:44,487 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962315441/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:01:59] 2026-01-09 20:00:44,488 | INFO     | extracted standard info from prmon json
[2026-01-09 15:01:59] 2026-01-09 20:00:44,488 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:01:59] 2026-01-09 20:00:44,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:01:59] 2026-01-09 20:00:44,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:01:59] 2026-01-09 20:00:44,489 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:01:59] 2026-01-09 20:00:44,509 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:01:59] 2026-01-09 20:00:44,511 | INFO     | sum of square deviations: 387378625114.5475
[2026-01-09 15:01:59] 2026-01-09 20:00:44,542 | INFO     | sum of deviations: 249335254627.8915
[2026-01-09 15:01:59] 2026-01-09 20:00:44,543 | INFO     | mean x: 1767955931.525534
[2026-01-09 15:01:59] 2026-01-09 20:00:44,543 | INFO     | mean y: 2501101.058495822
[2026-01-09 15:01:59] 2026-01-09 20:00:44,543 | INFO     | intersect: -1135439182.1139739
[2026-01-09 15:01:59] 2026-01-09 20:00:44,544 | INFO     | chi2: 5.27107504280462
[2026-01-09 15:01:59] 2026-01-09 20:00:44,550 | INFO     | sum of square deviations: 382008688117.1609
[2026-01-09 15:01:59] 2026-01-09 20:00:44,915 | INFO     | sum of deviations: 450673732780.1141
[2026-01-09 15:01:59] 2026-01-09 20:00:44,915 | INFO     | mean x: 1767955779.027985
[2026-01-09 15:01:59] 2026-01-09 20:00:44,915 | INFO     | mean y: 2506807.862873134
[2026-01-09 15:01:59] 2026-01-09 20:00:44,915 | INFO     | intersect: -2083234315.5964692
[2026-01-09 15:01:59] 2026-01-09 20:00:44,917 | INFO     | chi2: 3.2067145118900973
[2026-01-09 15:01:59] 2026-01-09 20:00:44,917 | INFO     | current chi2=3.2067145118900973 (change=39.16393741600239 %)
[2026-01-09 15:01:59] 2026-01-09 20:00:44,949 | INFO     | sum of square deviations: 376688481371.87866
[2026-01-09 15:01:59] 2026-01-09 20:00:45,261 | INFO     | sum of deviations: 447617034645.33936
[2026-01-09 15:01:59] 2026-01-09 20:00:45,340 | INFO     | mean x: 1767955626.5285847
[2026-01-09 15:01:59] 2026-01-09 20:00:45,341 | INFO     | mean y: 2506720.251171509
[2026-01-09 15:01:59] 2026-01-09 20:00:45,341 | INFO     | intersect: -2098346090.6687508
[2026-01-09 15:01:59] 2026-01-09 20:00:45,342 | INFO     | chi2: 3.2068586140110806
[2026-01-09 15:01:59] 2026-01-09 20:00:45,342 | INFO     | current chi2=3.2068586140110806 (change=-0.00449376208730327 %)
[2026-01-09 15:01:59] 2026-01-09 20:00:45,343 | INFO     | right removable region: 1066
[2026-01-09 15:01:59] 2026-01-09 20:00:45,433 | INFO     | sum of square deviations: 382008276304.1033
[2026-01-09 15:01:59] 2026-01-09 20:00:45,579 | INFO     | monitor loop #2843: job 0:6962315441 is in state 'finished'
[2026-01-09 15:01:59] 2026-01-09 20:00:45,579 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 15:01:59] 2026-01-09 20:00:45,805 | INFO     | time since job start (65956s) is within the limit (174528.0s)
[2026-01-09 15:01:59] 2026-01-09 20:00:45,812 | INFO     | sum of deviations: -43142490677.49627
[2026-01-09 15:01:59] 2026-01-09 20:00:45,813 | INFO     | mean x: 1767956084.028918
[2026-01-09 15:01:59] 2026-01-09 20:00:45,813 | INFO     | mean y: 2509401.9514925373
[2026-01-09 15:01:59] 2026-01-09 20:00:45,813 | INFO     | intersect: 202175308.69933838
[2026-01-09 15:01:59] 2026-01-09 20:00:45,814 | INFO     | chi2: 2.590983854551815
[2026-01-09 15:01:59] 2026-01-09 20:00:45,815 | INFO     | current chi2=2.590983854551815 (change=50.845248198682235 %)
[2026-01-09 15:01:59] 2026-01-09 20:00:45,868 | INFO     | sum of square deviations: 376687919925.76044
[2026-01-09 15:01:59] 2026-01-09 20:00:46,177 | INFO     | sum of deviations: -134973480013.17621
[2026-01-09 15:01:59] 2026-01-09 20:00:46,178 | INFO     | mean x: 1767956236.5304592
[2026-01-09 15:01:59] 2026-01-09 20:00:46,178 | INFO     | mean y: 2512031.420805998
[2026-01-09 15:01:59] 2026-01-09 20:00:46,178 | INFO     | intersect: 635999842.2392257
[2026-01-09 15:01:59] 2026-01-09 20:00:46,179 | INFO     | chi2: 2.287943303096479
[2026-01-09 15:01:59] 2026-01-09 20:00:46,186 | INFO     | current chi2=2.287943303096479 (change=11.695964485573986 %)
[2026-01-09 15:01:59] 2026-01-09 20:00:46,186 | INFO     | left removable region: 20
[2026-01-09 15:01:59] 2026-01-09 20:00:46,188 | INFO     | sum of square deviations: 354881890587.2334
[2026-01-09 15:01:59] 2026-01-09 20:00:46,363 | INFO     | sum of deviations: 51205777209.98363
[2026-01-09 15:01:59] 2026-01-09 20:00:46,363 | INFO     | mean x: 1767956206.041109
[2026-01-09 15:01:59] 2026-01-09 20:00:46,364 | INFO     | mean y: 2518199.186424474
[2026-01-09 15:01:59] 2026-01-09 20:00:46,364 | INFO     | intersect: -252579550.24718857
[2026-01-09 15:01:59] 2026-01-09 20:00:46,365 | INFO     | chi2: 0.18201144863310398
[2026-01-09 15:01:59] 2026-01-09 20:00:46,365 | INFO     | current memory leak: 0.14 B/s (using 1046 data points, chi2=0.18)
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | could have reported an average CPU frequency of 2600 MHz (39 samples)
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | ..............................
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | . Timing measurements:
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | . get job = 1 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | . initial setup = 6 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,378 | INFO     | . payload setup = 62 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,379 | INFO     | . stage-in = 0 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,379 | INFO     | . payload execution = 65705 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,379 | INFO     | . stage-out = 8 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,379 | INFO     | . log creation = 1 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,379 | INFO     | ..............................
[2026-01-09 15:01:59] 2026-01-09 20:00:46,978 | INFO     | 
[2026-01-09 15:01:59] 2026-01-09 20:00:46,978 | INFO     | job summary report
[2026-01-09 15:01:59] 2026-01-09 20:00:46,978 | INFO     | --------------------------------------------------
[2026-01-09 15:01:59] 2026-01-09 20:00:46,979 | INFO     | PanDA job id: 6962315441
[2026-01-09 15:01:59] 2026-01-09 20:00:46,979 | INFO     | task id: 47898826
[2026-01-09 15:01:59] 2026-01-09 20:00:46,987 | INFO     | errors: (none)
[2026-01-09 15:01:59] 2026-01-09 20:00:46,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:01:59] 2026-01-09 20:00:46,987 | INFO     | pilot state: finished 
[2026-01-09 15:01:59] 2026-01-09 20:00:46,987 | INFO     | transexitcode: 0
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | exeerrorcode: 0
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | exeerrordiag: 
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | exitcode: 0
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | exitmsg: OK
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | cpuconsumptiontime: 67112 s
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | nevents: 400
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | neventsw: 0
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | pid: 1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | pgrp: 1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | corecount: 8
[2026-01-09 15:01:59] 2026-01-09 20:00:46,988 | INFO     | event service: False
[2026-01-09 15:01:59] 2026-01-09 20:00:46,989 | INFO     | sizes: {0: 2283741, 1: 2283797, 2: 2284024, 3: 2284052, 14: 2284052, 26: 2284080, 37: 2284236, 49: 2284264, 53: 2284554, 60: 2284582, 65774: 2335967, 65775: 233624
[2026-01-09 15:01:59] 2026-01-09 20:00:46,989 | INFO     | --------------------------------------------------
[2026-01-09 15:01:59] 2026-01-09 20:00:46,989 | INFO     | 
[2026-01-09 15:01:59] 2026-01-09 20:00:46,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 15:01:59] 2026-01-09 20:00:47,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | job 6962315441 has completed (purged errors)
[2026-01-09 15:01:59] 2026-01-09 20:00:47,351 | INFO     | overall cleanup function is called
[2026-01-09 15:01:59] 2026-01-09 20:00:48,413 | INFO     | --- collectZombieJob: --- 10, [1326966]
[2026-01-09 15:01:59] 2026-01-09 20:00:48,413 | INFO     | zombie collector waiting for pid 1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:48,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:01:59] 2026-01-09 20:00:48,413 | INFO     | collected zombie processes
[2026-01-09 15:01:59] 2026-01-09 20:00:48,414 | INFO     | will attempt to kill all subprocesses of pid=1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:51,398 | INFO     | process IDs to be killed: [1326966] (in reverse order)
[2026-01-09 15:01:59] 2026-01-09 20:00:52,111 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:01:59] 2026-01-09 20:00:52,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:01:59] 2026-01-09 20:00:52,367 | INFO     | did not find any defunct processes belonging to 1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:52,581 | INFO     | did not find any defunct processes belonging to 1326966
[2026-01-09 15:01:59] 2026-01-09 20:00:52,582 | INFO     | ready for new job
[2026-01-09 15:01:59] 2026-01-09 20:00:52,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:01:59] 2026-01-09 20:00:52,636 | INFO     | ***************************************
[2026-01-09 15:01:59] 2026-01-09 20:00:52,636 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:01:59] 2026-01-09 20:00:52,637 | INFO     | ***************************************
[2026-01-09 15:01:59] 2026-01-09 20:00:52,637 | INFO     | 
[2026-01-09 15:01:59] 2026-01-09 20:00:52,690 | INFO     | architecture information:
[2026-01-09 15:01:59] 2026-01-09 20:00:52,717 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:01:59] 2026-01-09 20:00:52,915 | INFO     | cat /etc/os-release:
[2026-01-09 15:01:59] NAME="CentOS Linux"
[2026-01-09 15:01:59] VERSION="7 (Core)"
[2026-01-09 15:01:59] ID="centos"
[2026-01-09 15:01:59] ID_LIKE="rhel fedora"
[2026-01-09 15:01:59] VERSION_ID="7"
[2026-01-09 15:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:01:59] ANSI_COLOR="0;31"
[2026-01-09 15:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:01:59] HOME_URL="https://www.centos.org/"
[2026-01-09 15:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:01:59] 
[2026-01-09 15:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:01:59] 
[2026-01-09 15:01:59] 2026-01-09 20:00:52,916 | INFO     | ***************************************
[2026-01-09 15:01:59] 2026-01-09 20:00:53,419 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 15:01:59] 2026-01-09 20:00:53,569 | INFO     | sufficient remaining disk space (74582065152 B)
[2026-01-09 15:01:59] 2026-01-09 20:00:53,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:01:59] 2026-01-09 20:00:53,570 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:01:59] 2026-01-09 20:00:53,570 | INFO     | update_server=False
[2026-01-09 15:01:59] 2026-01-09 20:00:53,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:01:59] 2026-01-09 20:00:53,824 | INFO     | all data control threads have been joined
[2026-01-09 15:01:59] 2026-01-09 20:00:54,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:01:59] 2026-01-09 20:00:54,331 | INFO     | aborting loop
[2026-01-09 15:01:59] 2026-01-09 20:00:54,342 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:01:59] 2026-01-09 20:00:54,344 | INFO     | all job control threads have been joined
[2026-01-09 15:01:59] 2026-01-09 20:00:54,576 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:54,824 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:54,830 | INFO     | [data] control thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:54,880 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:54,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:01:59] 2026-01-09 20:00:55,052 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,093 | INFO     | all payload control threads have been joined
[2026-01-09 15:01:59] 2026-01-09 20:00:55,176 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,228 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,229 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,411 | INFO     | [job] control thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,418 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,840 | INFO     | [job] validate thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:55,881 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:56,117 | INFO     | [payload] control thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:56,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:01:59] 2026-01-09 20:00:56,349 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:57,176 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:00:58,966 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:01:59] 2026-01-09 20:01:27,062 | INFO     | PID=1316384 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 15:01:59] 2026-01-09 20:01:27,062 | INFO     | .. there are 37 such processes running
[2026-01-09 15:01:59] 2026-01-09 20:01:27,062 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:01:59] 2026-01-09 20:01:27,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:01:59] 2026-01-09 20:01:27,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:01:59] 2026-01-09 20:01:50,189 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:01:59] 2026-01-09 20:01:51,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140389970020160)>', '<ExcThread(monitor, started 140389235279616)>']
[2026-01-09 15:01:59] 2026-01-09 20:01:51,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:01:59] 2026-01-09 20:01:51,434 | INFO     | [monitor] control thread has ended
[2026-01-09 15:01:59] 2026-01-09 20:01:56,085 | INFO     | all workflow threads have been joined
[2026-01-09 15:01:59] 2026-01-09 20:01:56,085 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:01:59] 2026-01-09 20:01:56,086 | INFO     | traces error code: 0
[2026-01-09 15:01:59] 2026-01-09 20:01:56,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:01:59] 2026-01-09 20:01:57,494 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:01:59] 2026-01-09 20:01:57,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:01:59] 2026-01-09 20:01:57,548 [wrapper] pilotpid: 1316384
[2026-01-09 15:01:59] 2026-01-09 20:01:57,574 [wrapper] Pilot exit status: 0
[2026-01-09 15:01:59] 2026-01-09 20:01:57,766 [wrapper] pandaids: 6962315441
[2026-01-09 15:01:59] 2026-01-09 20:01:58,503 [wrapper] cleanup supervisor_pilot 2217343 1316385
[2026-01-09 15:01:59] 2026-01-09 20:01:58,527 [wrapper] Test setup, not cleaning
[2026-01-09 15:01:59] 2026-01-09 20:01:58,553 [wrapper] apfmon messages muted
[2026-01-09 15:01:59] 2026-01-09 20:01:58,580 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:01:59] 2026-01-09 20:01:58,613 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:01:59]  *** Error codes and diagnostics ***
[2026-01-09 15:01:59]     "exeErrorCode": 0,
[2026-01-09 15:01:59]     "exeErrorDiag": "",
[2026-01-09 15:01:59]     "pilotErrorCode": 0,
[2026-01-09 15:01:59]     "pilotErrorDiag": "",
[2026-01-09 15:01:59]  *** Listing of results directory ***
[2026-01-09 15:01:59] total 450784
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-09 15:01:59] -rwx------. 1 boincer umatlas     36322 Jan  7 15:56 runpilot2-wrapper.sh
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:56 queuedata.json
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas       100 Jan  8 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:01:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 20:39 run_atlas
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas       105 Jan  8 20:39 job.xml
[2026-01-09 15:01:59] -rw-r--r--. 2 boincer umatlas 225406674 Jan  8 20:39 EVNT.47898824._000466.pool.root.1
[2026-01-09 15:01:59] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:39 start_atlas.sh
[2026-01-09 15:01:59] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 20:39 shared
[2026-01-09 15:01:59] -rw-r--r--. 2 boincer umatlas    610538 Jan  8 20:39 input.tar.gz
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas         0 Jan  8 20:39 boinc_lockfile
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 20:39 pandaJob.out
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas        57 Jan  8 20:39 setup.sh.local
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas    989821 Jan  8 20:41 agis_schedconf.cvmfs.json
[2026-01-09 15:01:59] drwx------. 7 boincer umatlas      4096 Jan  8 20:41 pilot3
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas 217023114 Jan  9 14:56 HITS.47898826._011946.pool.root.1
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas       531 Jan  9 14:56 boinc_task_state.xml
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas      6660 Jan  9 14:59 init_data.xml
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas      1054 Jan  9 14:59 memory_monitor_summary.json
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas   1516240 Jan  9 14:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas    982315 Jan  9 14:59 log.47898826._011946.job.log.tgz.1
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas        95 Jan  9 15:00 pilot_heartbeat.json
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas      7840 Jan  9 15:00 heartbeat.json
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas        28 Jan  9 15:01 wrapper_checkpoint.txt
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas      4824 Jan  9 15:01 pilotlog.txt
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas   6627530 Jan  9 15:01 log.47898826._011946.job.log.1
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas       357 Jan  9 15:01 output.list
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas       620 Jan  9 15:01 runtime_log
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas   7628800 Jan  9 15:01 result.tar.gz
[2026-01-09 15:01:59] -rw-------. 1 boincer umatlas       660 Jan  9 15:01 Z7lKDmkkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRZdKDmj6gktm.diag
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas      9333 Jan  9 15:01 runtime_log.err
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 15:01 boinc_mmap_file
[2026-01-09 15:01:59] -rw-r--r--. 1 boincer umatlas     21261 Jan  9 15:01 stderr.txt
[2026-01-09 15:02:00] HITS file was successfully produced:
[2026-01-09 15:02:00] -rw-------. 1 boincer umatlas 217023114 Jan  9 14:56 shared/HITS.pool.root.1
[2026-01-09 15:02:00]  *** Contents of shared directory: ***
[2026-01-09 15:02:00] total 440136
[2026-01-09 15:02:00] -rw-r--r--. 2 boincer umatlas 225406674 Jan  8 20:39 ATLAS.root_0
[2026-01-09 15:02:00] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 20:39 start_atlas.sh
[2026-01-09 15:02:00] -rw-r--r--. 2 boincer umatlas    610538 Jan  8 20:39 input.tar.gz
[2026-01-09 15:02:00] -rw-------. 1 boincer umatlas 217023114 Jan  9 14:56 HITS.pool.root.1
[2026-01-09 15:02:00] -rw-------. 1 boincer umatlas   7628800 Jan  9 15:01 result.tar.gz
15:02:01 (1308146): run_atlas exited; CPU time 69767.889392
15:02:01 (1308146): called boinc_finish(0)

</stderr_txt>
]]>

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