Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:30:18 (320457): wrapper (7.7.26015): starting
12:30:18 (320457): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 12:30:18] Arguments: --nthreads 9
[2026-01-08 12:30:18] Threads: 9
[2026-01-08 12:30:18] Checking for CVMFS
[2026-01-08 12:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:30:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:30:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:30:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:30:21] 2.13.3.0 11793 92272 392096 154915 1 381 24742597 32935936 20321 16776704 0 348242650 99.504 459497714 35043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 12:30:21] CVMFS is ok
[2026-01-08 12:30:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:30:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:30:21] Further information can be found at the LHC@home message board.
[2026-01-08 12:30:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:30:21] Checking for apptainer binary...
[2026-01-08 12:30:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:30:21] Running /usr/bin/apptainer --version
[2026-01-08 12:30:21] apptainer version 1.4.5-2.el9
[2026-01-08 12:30:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:30:22] c6-2-11-2.aglt2.org
[2026-01-08 12:30:22] apptainer works
[2026-01-08 12:30:22] Set ATHENA_PROC_NUMBER=9
[2026-01-08 12:30:22] Set ATHENA_CORE_NUMBER=9
[2026-01-08 12:30:22] Starting ATLAS job with PandaID=6962918465
[2026-01-08 12:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 19:52:22]  *** The last 200 lines of the pilot log: ***
[2026-01-08 19:52:22] 2026-01-09 00:51:32,546 | INFO     | monitor loop #1604: job 0:6962918465 is in state 'finished'
[2026-01-08 19:52:22] 2026-01-09 00:51:32,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:52:22] 2026-01-09 00:51:33,493 | INFO     | time since job start (26406s) is within the limit (174528.0s)
[2026-01-08 19:52:22] 2026-01-09 00:51:35,055 | INFO     | monitor loop #1605: job 0:6962918465 is in state 'finished'
[2026-01-08 19:52:22] 2026-01-09 00:51:35,060 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:52:22] 2026-01-09 00:51:35,500 | INFO     | time since job start (26408s) is within the limit (174528.0s)
[2026-01-08 19:52:22] 2026-01-09 00:51:37,507 | INFO     | time since job start (26410s) is within the limit (174528.0s)
[2026-01-08 19:52:22] 2026-01-09 00:51:37,565 | INFO     | monitor loop #1606: job 0:6962918465 is in state 'finished'
[2026-01-08 19:52:22] 2026-01-09 00:51:37,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,183 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 19:52:22] 2026-01-09 00:51:38,209 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2660.60159375
[2026-01-08 19:52:22] 2026-01-09 00:51:38,246 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962918465/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,247 | INFO     | extracted standard info from prmon json
[2026-01-08 19:52:22] 2026-01-09 00:51:38,247 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 19:52:22] 2026-01-09 00:51:38,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 19:52:22] 2026-01-09 00:51:38,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 19:52:22] 2026-01-09 00:51:38,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 19:52:22] 2026-01-09 00:51:38,287 | INFO     | fitting pss+swap vs Time
[2026-01-08 19:52:22] 2026-01-09 00:51:38,288 | INFO     | sum of square deviations: 24653615596.47446
[2026-01-08 19:52:22] 2026-01-09 00:51:38,298 | INFO     | sum of deviations: 59770481446.84182
[2026-01-08 19:52:22] 2026-01-09 00:51:38,299 | INFO     | mean x: 1767906702.8511627
[2026-01-08 19:52:22] 2026-01-09 00:51:38,299 | INFO     | mean y: 2541360.21627907
[2026-01-08 19:52:22] 2026-01-09 00:51:38,299 | INFO     | intersect: -4283589993.175296
[2026-01-08 19:52:22] 2026-01-09 00:51:38,300 | INFO     | chi2: 3.207195252806085
[2026-01-08 19:52:22] 2026-01-09 00:51:38,300 | INFO     | sum of square deviations: 23803582151.058895
[2026-01-08 19:52:22] 2026-01-09 00:51:38,317 | INFO     | sum of deviations: 86451888928.94124
[2026-01-08 19:52:22] 2026-01-09 00:51:38,317 | INFO     | mean x: 1767906550.3529413
[2026-01-08 19:52:22] 2026-01-09 00:51:38,317 | INFO     | mean y: 2546100.3270588233
[2026-01-08 19:52:22] 2026-01-09 00:51:38,318 | INFO     | intersect: -6418288367.272649
[2026-01-08 19:52:22] 2026-01-09 00:51:38,341 | INFO     | chi2: 2.5224691930570606
[2026-01-08 19:52:22] 2026-01-09 00:51:38,341 | INFO     | current chi2=2.5224691930570606 (change=21.349684249810924 %)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,341 | INFO     | right removable region: 424
[2026-01-08 19:52:22] 2026-01-09 00:51:38,342 | INFO     | sum of square deviations: 23803542379.058907
[2026-01-08 19:52:22] 2026-01-09 00:51:38,365 | INFO     | sum of deviations: -36246112443.2353
[2026-01-08 19:52:22] 2026-01-09 00:51:38,365 | INFO     | mean x: 1767906855.3529413
[2026-01-08 19:52:22] 2026-01-09 00:51:38,365 | INFO     | mean y: 2558537.8682352942
[2026-01-08 19:52:22] 2026-01-09 00:51:38,365 | INFO     | intersect: 2694584356.87672
[2026-01-08 19:52:22] 2026-01-09 00:51:38,366 | INFO     | chi2: 1.1809224146727921
[2026-01-08 19:52:22] 2026-01-09 00:51:38,366 | INFO     | current chi2=1.1809224146727921 (change=63.17896724125036 %)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,371 | INFO     | sum of square deviations: 22973262776.847557
[2026-01-08 19:52:22] 2026-01-09 00:51:38,380 | INFO     | sum of deviations: -60548725538.819046
[2026-01-08 19:52:22] 2026-01-09 00:51:38,381 | INFO     | mean x: 1767907007.852381
[2026-01-08 19:52:22] 2026-01-09 00:51:38,382 | INFO     | mean y: 2562996.019047619
[2026-01-08 19:52:22] 2026-01-09 00:51:38,382 | INFO     | intersect: 4662089038.810324
[2026-01-08 19:52:22] 2026-01-09 00:51:38,383 | INFO     | chi2: 1.0547963444699986
[2026-01-08 19:52:22] 2026-01-09 00:51:38,384 | INFO     | current chi2=1.0547963444699986 (change=10.680301147280732 %)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,384 | INFO     | left removable region: 20
[2026-01-08 19:52:22] 2026-01-09 00:51:38,385 | INFO     | sum of square deviations: 20446469104.383675
[2026-01-08 19:52:22] 2026-01-09 00:51:38,388 | INFO     | sum of deviations: -41407297584.52477
[2026-01-08 19:52:22] 2026-01-09 00:51:38,389 | INFO     | mean x: 1767907129.8539605
[2026-01-08 19:52:22] 2026-01-09 00:51:38,389 | INFO     | mean y: 2569722.702970297
[2026-01-08 19:52:22] 2026-01-09 00:51:38,389 | INFO     | intersect: 3582858145.8014708
[2026-01-08 19:52:22] 2026-01-09 00:51:38,389 | INFO     | chi2: 0.33382562134184574
[2026-01-08 19:52:22] 2026-01-09 00:51:38,391 | INFO     | current memory leak: -2.03 B/s (using 404 data points, chi2=0.33)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | could have reported an average CPU frequency of 2667 MHz (18 samples)
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | ..............................
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . Timing measurements:
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . get job = 0 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . initial setup = 6 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . payload setup = 38 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . stage-in = 0 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . payload execution = 26258 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,393 | INFO     | . stage-out = 7 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,394 | INFO     | . log creation = 1 s
[2026-01-08 19:52:22] 2026-01-09 00:51:38,394 | INFO     | ..............................
[2026-01-08 19:52:22] 2026-01-09 00:51:39,082 | INFO     | 
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | job summary report
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | --------------------------------------------------
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | PanDA job id: 6962918465
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | task id: 47898826
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | errors: (none)
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | pilot state: finished 
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | transexitcode: 0
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | exeerrorcode: 0
[2026-01-08 19:52:22] 2026-01-09 00:51:39,083 | INFO     | exeerrordiag: 
[2026-01-08 19:52:22] 2026-01-09 00:51:39,084 | INFO     | exitcode: 0
[2026-01-08 19:52:22] 2026-01-09 00:51:39,084 | INFO     | exitmsg: OK
[2026-01-08 19:52:22] 2026-01-09 00:51:39,084 | INFO     | cpuconsumptiontime: 62510 s
[2026-01-08 19:52:22] 2026-01-09 00:51:39,084 | INFO     | nevents: 400
[2026-01-08 19:52:22] 2026-01-09 00:51:39,084 | INFO     | neventsw: 0
[2026-01-08 19:52:22] 2026-01-09 00:51:39,102 | INFO     | pid: 334147
[2026-01-08 19:52:22] 2026-01-09 00:51:39,102 | INFO     | pgrp: 334147
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | corecount: 9
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | event service: False
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 30: 2284371, 35: 2284527, 26302: 2320650, 26304: 2320649, 26312: 2329703, 26314: 2329759, 263
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | --------------------------------------------------
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | 
[2026-01-08 19:52:22] 2026-01-09 00:51:39,103 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 19:52:22] 2026-01-09 00:51:39,150 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,150 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,150 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,150 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | job 6962918465 has completed (purged errors)
[2026-01-08 19:52:22] 2026-01-09 00:51:39,152 | INFO     | overall cleanup function is called
[2026-01-08 19:52:22] 2026-01-09 00:51:40,220 | INFO     | --- collectZombieJob: --- 10, [334147]
[2026-01-08 19:52:22] 2026-01-09 00:51:40,220 | INFO     | zombie collector waiting for pid 334147
[2026-01-08 19:52:22] 2026-01-09 00:51:40,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 19:52:22] 2026-01-09 00:51:40,227 | INFO     | collected zombie processes
[2026-01-08 19:52:22] 2026-01-09 00:51:40,227 | INFO     | will attempt to kill all subprocesses of pid=334147
[2026-01-08 19:52:22] 2026-01-09 00:51:42,372 | INFO     | process IDs to be killed: [334147] (in reverse order)
[2026-01-08 19:52:22] 2026-01-09 00:51:42,695 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 19:52:22] 2026-01-09 00:51:42,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 19:52:22] 2026-01-09 00:51:42,726 | INFO     | did not find any defunct processes belonging to 334147
[2026-01-08 19:52:22] 2026-01-09 00:51:42,753 | INFO     | did not find any defunct processes belonging to 334147
[2026-01-08 19:52:22] 2026-01-09 00:51:42,753 | INFO     | ready for new job
[2026-01-08 19:52:22] 2026-01-09 00:51:42,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 19:52:22] 2026-01-09 00:51:42,757 | INFO     | ***************************************
[2026-01-08 19:52:22] 2026-01-09 00:51:42,757 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 19:52:22] 2026-01-09 00:51:42,757 | INFO     | ***************************************
[2026-01-08 19:52:22] 2026-01-09 00:51:42,757 | INFO     | 
[2026-01-08 19:52:22] 2026-01-09 00:51:42,801 | INFO     | architecture information:
[2026-01-08 19:52:22] 2026-01-09 00:51:42,807 | INFO     | executing command: cat /etc/os-release
[2026-01-08 19:52:22] 2026-01-09 00:51:42,868 | INFO     | cat /etc/os-release:
[2026-01-08 19:52:22] NAME="CentOS Linux"
[2026-01-08 19:52:22] VERSION="7 (Core)"
[2026-01-08 19:52:22] ID="centos"
[2026-01-08 19:52:22] ID_LIKE="rhel fedora"
[2026-01-08 19:52:22] VERSION_ID="7"
[2026-01-08 19:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 19:52:22] ANSI_COLOR="0;31"
[2026-01-08 19:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 19:52:22] HOME_URL="https://www.centos.org/"
[2026-01-08 19:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 19:52:22] 
[2026-01-08 19:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 19:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 19:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 19:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 19:52:22] 
[2026-01-08 19:52:22] 2026-01-09 00:51:42,869 | INFO     | ***************************************
[2026-01-08 19:52:22] 2026-01-09 00:51:43,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 19:52:22] 2026-01-09 00:51:43,482 | INFO     | sufficient remaining disk space (95200215040 B)
[2026-01-08 19:52:22] 2026-01-09 00:51:43,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 19:52:22] 2026-01-09 00:51:43,483 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 19:52:22] 2026-01-09 00:51:43,483 | INFO     | update_server=False
[2026-01-08 19:52:22] 2026-01-09 00:51:43,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 19:52:22] 2026-01-09 00:51:43,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 19:52:22] 2026-01-09 00:51:43,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:52:22] 2026-01-09 00:51:43,645 | INFO     | aborting loop
[2026-01-08 19:52:22] 2026-01-09 00:51:43,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 19:52:22] 2026-01-09 00:51:44,275 | INFO     | all data control threads have been joined
[2026-01-08 19:52:22] 2026-01-09 00:51:44,477 | INFO     | all payload control threads have been joined
[2026-01-08 19:52:22] 2026-01-09 00:51:44,489 | INFO     | [job] retrieve thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,630 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,650 | INFO     | [job] job monitor thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,651 | INFO     | [data] copytool_in thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,742 | INFO     | [job] queue monitor thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,908 | INFO     | [payload] validate_post thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,970 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:44,976 | INFO     | all job control threads have been joined
[2026-01-08 19:52:22] 2026-01-09 00:51:45,065 | INFO     | [payload] failed_post thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,281 | INFO     | [data] control thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,483 | INFO     | [payload] control thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,508 | INFO     | [data] copytool_out thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,646 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,667 | INFO     | [job] validate thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,673 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:45,854 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 19:52:22] 2026-01-09 00:51:45,982 | INFO     | [job] control thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:51:49,863 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 19:52:22] 2026-01-09 00:52:13,421 | INFO     | PID=326095 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 19:52:22] 2026-01-09 00:52:13,421 | INFO     | .. there are 15 such processes running
[2026-01-08 19:52:22] 2026-01-09 00:52:13,445 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 19:52:22] 2026-01-09 00:52:13,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 19:52:22] 2026-01-09 00:52:13,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 19:52:22] 2026-01-09 00:52:13,635 | INFO     | [monitor] cgroup control has ended
[2026-01-08 19:52:22] 2026-01-09 00:52:14,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048643909440)>', '<ExcThread(monitor, started 140048003491584)>']
[2026-01-08 19:52:22] 2026-01-09 00:52:15,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 19:52:22] 2026-01-09 00:52:15,457 | INFO     | [monitor] control thread has ended
[2026-01-08 19:52:22] 2026-01-09 00:52:19,891 | INFO     | all workflow threads have been joined
[2026-01-08 19:52:22] 2026-01-09 00:52:19,891 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 19:52:22] 2026-01-09 00:52:19,892 | INFO     | traces error code: 0
[2026-01-08 19:52:22] 2026-01-09 00:52:19,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 19:52:22] 2026-01-09 00:52:20,609 [wrapper] ==== pilot stdout END ====
[2026-01-08 19:52:22] 2026-01-09 00:52:20,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 19:52:22] 2026-01-09 00:52:20,724 [wrapper] pilotpid: 326095
[2026-01-08 19:52:22] 2026-01-09 00:52:20,749 [wrapper] Pilot exit status: 0
[2026-01-08 19:52:22] 2026-01-09 00:52:20,921 [wrapper] pandaids: 6962918465
[2026-01-08 19:52:22] 2026-01-09 00:52:21,461 [wrapper] cleanup supervisor_pilot 1279596 326096
[2026-01-08 19:52:22] 2026-01-09 00:52:21,481 [wrapper] Test setup, not cleaning
[2026-01-08 19:52:22] 2026-01-09 00:52:21,536 [wrapper] apfmon messages muted
[2026-01-08 19:52:22] 2026-01-09 00:52:21,585 [wrapper] ==== wrapper stdout END ====
[2026-01-08 19:52:22] 2026-01-09 00:52:21,631 [wrapper] ==== wrapper stderr END ====
[2026-01-08 19:52:22]  *** Error codes and diagnostics ***
[2026-01-08 19:52:22]     "exeErrorCode": 0,
[2026-01-08 19:52:22]     "exeErrorDiag": "",
[2026-01-08 19:52:22]     "pilotErrorCode": 0,
[2026-01-08 19:52:22]     "pilotErrorDiag": "",
[2026-01-08 19:52:22]  *** Listing of results directory ***
[2026-01-08 19:52:22] total 442776
[2026-01-08 19:52:22] -rwx------. 1 boincer umatlas     36322 Jan  8 03:06 runpilot2-wrapper.sh
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas       100 Jan  8 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 19:52:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 12:30 run_atlas
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas       105 Jan  8 12:30 job.xml
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas 223119983 Jan  8 12:30 EVNT.47898824._000796.pool.root.1
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:30 start_atlas.sh
[2026-01-08 19:52:22] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 12:30 shared
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 12:30 input.tar.gz
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas         0 Jan  8 12:30 boinc_lockfile
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas      2519 Jan  8 12:30 pandaJob.out
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas        57 Jan  8 12:30 setup.sh.local
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas    989837 Jan  8 12:31 agis_schedconf.cvmfs.json
[2026-01-08 19:52:22] drwx------. 5 boincer umatlas      4096 Jan  8 12:31 pilot3
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas      6878 Jan  8 19:46 init_data.xml
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas 218543684 Jan  8 19:48 HITS.47898826._020513.pool.root.1
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas       530 Jan  8 19:49 boinc_task_state.xml
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas      1037 Jan  8 19:50 memory_monitor_summary.json
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas   1516240 Jan  8 19:50 agis_ddmendpoints.agis.ALL.json
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas    625829 Jan  8 19:51 log.47898826._020513.job.log.tgz.1
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas      7821 Jan  8 19:51 heartbeat.json
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 19:52 boinc_mmap_file
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas        28 Jan  8 19:52 wrapper_checkpoint.txt
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas        95 Jan  8 19:52 pilot_heartbeat.json
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas      4823 Jan  8 19:52 pilotlog.txt
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas   3286424 Jan  8 19:52 log.47898826._020513.job.log.1
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas       357 Jan  8 19:52 output.list
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas       620 Jan  8 19:52 runtime_log
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas   3932160 Jan  8 19:52 result.tar.gz
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas      9348 Jan  8 19:52 runtime_log.err
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas       658 Jan  8 19:52 3CQODmYD0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmfeKDmhpO7wn.diag
[2026-01-08 19:52:22] -rw-r--r--. 1 boincer umatlas     21444 Jan  8 19:52 stderr.txt
[2026-01-08 19:52:22] HITS file was successfully produced:
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas 218543684 Jan  8 19:48 shared/HITS.pool.root.1
[2026-01-08 19:52:22]  *** Contents of shared directory: ***
[2026-01-08 19:52:22] total 435756
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas 223119983 Jan  8 12:30 ATLAS.root_0
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:30 start_atlas.sh
[2026-01-08 19:52:22] -rw-r--r--. 2 boincer umatlas    592403 Jan  8 12:30 input.tar.gz
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas 218543684 Jan  8 19:48 HITS.pool.root.1
[2026-01-08 19:52:22] -rw-------. 1 boincer umatlas   3932160 Jan  8 19:52 result.tar.gz
19:52:23 (320457): run_atlas exited; CPU time 63550.689552
19:52:23 (320457): called boinc_finish(0)

</stderr_txt>
]]>

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