Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:17:13 (19708): wrapper (7.7.26015): starting
12:17:13 (19708): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:17:13] Arguments: --nthreads 8
[2026-01-08 12:17:13] Threads: 8
[2026-01-08 12:17:13] Checking for CVMFS
[2026-01-08 12:17:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:17:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:17:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:17:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:17:14] 2.11.2.0 2804 102298 85164 154915 3 9 13045947 20275201 1 130560 0 18851348 99.703 7252595 33738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 12:17:14] CVMFS is ok
[2026-01-08 12:17:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:17:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:17:14] Further information can be found at the LHC@home message board.
[2026-01-08 12:17:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:17:14] Checking for apptainer binary...
[2026-01-08 12:17:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:17:14] Running /usr/bin/apptainer --version
[2026-01-08 12:17:14] apptainer version 1.3.2-1.el7
[2026-01-08 12:17:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:17:15] c-204-3.aglt2.org
[2026-01-08 12:17:15] apptainer works
[2026-01-08 12:17:15] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:17:15] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:17:15] Starting ATLAS job with PandaID=6962930845
[2026-01-08 12:17:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:56:56]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:56:56] 2026-01-08 19:55:51,883 | INFO     | monitor loop #710: job 0:6962930845 is in state 'finished'
[2026-01-08 14:56:56] 2026-01-08 19:55:51,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,954 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 14:56:56] 2026-01-08 19:55:51,957 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2026-01-08 14:56:56] 2026-01-08 19:55:51,959 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962930845/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,960 | INFO     | extracted standard info from prmon json
[2026-01-08 14:56:56] 2026-01-08 19:55:51,961 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:56:56] 2026-01-08 19:55:51,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:56:56] 2026-01-08 19:55:51,965 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:56:56] 2026-01-08 19:55:51,965 | INFO     | sum of square deviations: 1154665010.9935477
[2026-01-08 14:56:56] 2026-01-08 19:55:51,966 | INFO     | sum of deviations: 13145572753.445156
[2026-01-08 14:56:56] 2026-01-08 19:55:51,966 | INFO     | mean x: 1767897385.3935485
[2026-01-08 14:56:56] 2026-01-08 19:55:51,967 | INFO     | mean y: 2633022.8451612904
[2026-01-08 14:56:56] 2026-01-08 19:55:51,967 | INFO     | intersect: -20124437148.19878
[2026-01-08 14:56:56] 2026-01-08 19:55:51,967 | INFO     | chi2: 4.328977764761618
[2026-01-08 14:56:56] 2026-01-08 19:55:51,967 | INFO     | sum of square deviations: 1046504842.693334
[2026-01-08 14:56:56] 2026-01-08 19:55:51,968 | INFO     | sum of deviations: 45680735686.93334
[2026-01-08 14:56:56] 2026-01-08 19:55:51,968 | INFO     | mean x: 1767897232.9066668
[2026-01-08 14:56:56] 2026-01-08 19:55:51,968 | INFO     | mean y: 2678480.566666667
[2026-01-08 14:56:56] 2026-01-08 19:55:51,968 | INFO     | intersect: -77167386026.94725
[2026-01-08 14:56:56] 2026-01-08 19:55:51,969 | INFO     | chi2: 2.49361854372886
[2026-01-08 14:56:56] 2026-01-08 19:55:51,969 | INFO     | current chi2=2.49361854372886 (change=42.39705816862344 %)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,969 | INFO     | sum of square deviations: 945321549.3379326
[2026-01-08 14:56:56] 2026-01-08 19:55:51,970 | INFO     | sum of deviations: 46948377903.4276
[2026-01-08 14:56:56] 2026-01-08 19:55:51,970 | INFO     | mean x: 1767897080.4206896
[2026-01-08 14:56:56] 2026-01-08 19:55:51,970 | INFO     | mean y: 2680367.124137931
[2026-01-08 14:56:56] 2026-01-08 19:55:51,970 | INFO     | intersect: -87798026476.05197
[2026-01-08 14:56:56] 2026-01-08 19:55:51,970 | INFO     | chi2: 2.4734821065518764
[2026-01-08 14:56:56] 2026-01-08 19:55:51,971 | INFO     | current chi2=2.4734821065518764 (change=0.8075187453038504 %)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,971 | INFO     | right removable region: 144
[2026-01-08 14:56:56] 2026-01-08 19:55:51,971 | INFO     | sum of square deviations: 1046467632.693334
[2026-01-08 14:56:56] 2026-01-08 19:55:51,972 | INFO     | sum of deviations: -23870411760.506668
[2026-01-08 14:56:56] 2026-01-08 19:55:51,972 | INFO     | mean x: 1767897537.9066668
[2026-01-08 14:56:56] 2026-01-08 19:55:51,972 | INFO     | mean y: 2684712.6066666665
[2026-01-08 14:56:56] 2026-01-08 19:55:51,972 | INFO     | intersect: 40329247008.28435
[2026-01-08 14:56:56] 2026-01-08 19:55:51,972 | INFO     | chi2: 1.9978324927640965
[2026-01-08 14:56:56] 2026-01-08 19:55:51,973 | INFO     | current chi2=1.9978324927640965 (change=53.849786223743514 %)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,973 | INFO     | sum of square deviations: 945256523.1724131
[2026-01-08 14:56:56] 2026-01-08 19:55:51,973 | INFO     | sum of deviations: -28583521337.06897
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | mean x: 1767897690.413793
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | mean y: 2691797.4344827584
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | intersect: 53461980484.59705
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | chi2: 1.9525687134158303
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | current chi2=1.9525687134158303 (change=2.26564436769379 %)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,974 | INFO     | left removable region: 20
[2026-01-08 14:56:56] 2026-01-08 19:55:51,975 | INFO     | sum of square deviations: 591191778.6048379
[2026-01-08 14:56:56] 2026-01-08 19:55:51,975 | INFO     | sum of deviations: 1419622511.2500048
[2026-01-08 14:56:56] 2026-01-08 19:55:51,975 | INFO     | mean x: 1767897659.9435484
[2026-01-08 14:56:56] 2026-01-08 19:55:51,976 | INFO     | mean y: 2754560.75
[2026-01-08 14:56:56] 2026-01-08 19:55:51,976 | INFO     | intersect: -4242479230.499358
[2026-01-08 14:56:56] 2026-01-08 19:55:51,976 | INFO     | chi2: 0.032143863198057836
[2026-01-08 14:56:56] 2026-01-08 19:55:51,976 | INFO     | current memory leak: 2.40 B/s (using 124 data points, chi2=0.03)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,976 | INFO     | could have reported an average CPU frequency of 2008 MHz (9 samples)
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | ..............................
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . Timing measurements:
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . get job = 0 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . initial setup = 2 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . payload setup = 11 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . stage-in = 0 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . payload execution = 9455 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,977 | INFO     | . stage-out = 1 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,978 | INFO     | . log creation = 0 s
[2026-01-08 14:56:56] 2026-01-08 19:55:51,978 | INFO     | ..............................
[2026-01-08 14:56:56] 2026-01-08 19:55:52,033 | INFO     | time since job start (9499s) is within the limit (174528.0s)
[2026-01-08 14:56:56] 2026-01-08 19:55:52,421 | INFO     | 
[2026-01-08 14:56:56] 2026-01-08 19:55:52,422 | INFO     | job summary report
[2026-01-08 14:56:56] 2026-01-08 19:55:52,422 | INFO     | --------------------------------------------------
[2026-01-08 14:56:56] 2026-01-08 19:55:52,422 | INFO     | PanDA job id: 6962930845
[2026-01-08 14:56:56] 2026-01-08 19:55:52,422 | INFO     | task id: 47961985
[2026-01-08 14:56:56] 2026-01-08 19:55:52,422 | INFO     | errors: (none)
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | pilot state: finished 
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | transexitcode: 0
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | exeerrorcode: 0
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | exeerrordiag: 
[2026-01-08 14:56:56] 2026-01-08 19:55:52,423 | INFO     | exitcode: 0
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | exitmsg: OK
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | cpuconsumptiontime: 70383 s
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | nevents: 150
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | neventsw: 0
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | pid: 29902
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | pgrp: 29902
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | corecount: 8
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | event service: False
[2026-01-08 14:56:56] 2026-01-08 19:55:52,424 | INFO     | sizes: {0: 2284325, 1: 2284524, 7: 2284786, 11: 2284814, 9471: 2314061, 9473: 2323055, 9474: 2323267, 9481: 2323577}
[2026-01-08 14:56:56] 2026-01-08 19:55:52,425 | INFO     | --------------------------------------------------
[2026-01-08 14:56:56] 2026-01-08 19:55:52,425 | INFO     | 
[2026-01-08 14:56:56] 2026-01-08 19:55:52,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 14:56:56] 2026-01-08 19:55:52,456 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,457 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,457 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,457 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,460 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:56:56] 2026-01-08 19:55:52,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,460 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:56:56] 2026-01-08 19:55:52,461 | INFO     | job 6962930845 has completed (purged errors)
[2026-01-08 14:56:56] 2026-01-08 19:55:52,461 | INFO     | overall cleanup function is called
[2026-01-08 14:56:56] 2026-01-08 19:55:53,475 | INFO     | --- collectZombieJob: --- 10, [29902]
[2026-01-08 14:56:56] 2026-01-08 19:55:53,475 | INFO     | zombie collector waiting for pid 29902
[2026-01-08 14:56:56] 2026-01-08 19:55:53,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:56:56] 2026-01-08 19:55:53,476 | INFO     | collected zombie processes
[2026-01-08 14:56:56] 2026-01-08 19:55:53,476 | INFO     | will attempt to kill all subprocesses of pid=29902
[2026-01-08 14:56:56] 2026-01-08 19:55:53,566 | INFO     | process IDs to be killed: [29902] (in reverse order)
[2026-01-08 14:56:56] 2026-01-08 19:55:53,627 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:56:56] 2026-01-08 19:55:53,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:56:56] 2026-01-08 19:55:53,632 | INFO     | did not find any defunct processes belonging to 29902
[2026-01-08 14:56:56] 2026-01-08 19:55:53,635 | INFO     | did not find any defunct processes belonging to 29902
[2026-01-08 14:56:56] 2026-01-08 19:55:53,636 | INFO     | ready for new job
[2026-01-08 14:56:56] 2026-01-08 19:55:53,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:56:56] 2026-01-08 19:55:53,638 | INFO     | ***************************************
[2026-01-08 14:56:56] 2026-01-08 19:55:53,638 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:56:56] 2026-01-08 19:55:53,638 | INFO     | ***************************************
[2026-01-08 14:56:56] 2026-01-08 19:55:53,638 | INFO     | 
[2026-01-08 14:56:56] 2026-01-08 19:55:53,638 | INFO     | architecture information:
[2026-01-08 14:56:56] 2026-01-08 19:55:53,639 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:56:56] 2026-01-08 19:55:53,658 | INFO     | cat /etc/os-release:
[2026-01-08 14:56:56] NAME="CentOS Linux"
[2026-01-08 14:56:56] VERSION="7 (Core)"
[2026-01-08 14:56:56] ID="centos"
[2026-01-08 14:56:56] ID_LIKE="rhel fedora"
[2026-01-08 14:56:56] VERSION_ID="7"
[2026-01-08 14:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:56:56] ANSI_COLOR="0;31"
[2026-01-08 14:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:56:56] HOME_URL="https://www.centos.org/"
[2026-01-08 14:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:56:56] 
[2026-01-08 14:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:56:56] 
[2026-01-08 14:56:56] 2026-01-08 19:55:53,659 | INFO     | ***************************************
[2026-01-08 14:56:56] 2026-01-08 19:55:54,162 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 14:56:56] 2026-01-08 19:55:54,182 | INFO     | sufficient remaining disk space (18214813696 B)
[2026-01-08 14:56:56] 2026-01-08 19:55:54,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:56:56] 2026-01-08 19:55:54,183 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:56:56] 2026-01-08 19:55:54,183 | INFO     | update_server=False
[2026-01-08 14:56:56] 2026-01-08 19:55:54,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:56:56] 2026-01-08 19:55:54,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:56:56] 2026-01-08 19:55:54,387 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 14:56:56] 2026-01-08 19:55:54,387 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 14:56:56] 2026-01-08 19:55:54,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:56:56] 2026-01-08 19:55:54,387 | INFO     | will abort loop
[2026-01-08 14:56:56] 2026-01-08 19:55:54,771 | INFO     | all job control threads have been joined
[2026-01-08 14:56:56] 2026-01-08 19:55:54,879 | INFO     | all data control threads have been joined
[2026-01-08 14:56:56] 2026-01-08 19:55:55,189 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,203 | INFO     | all payload control threads have been joined
[2026-01-08 14:56:56] 2026-01-08 19:55:55,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,393 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,493 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,777 | INFO     | [job] control thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,782 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,794 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,802 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:55,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:56:56] 2026-01-08 19:55:55,884 | INFO     | [data] control thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:56,014 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:56,201 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:56,208 | INFO     | [payload] control thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:56,291 | INFO     | [job] validate thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:57,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:56:56] 2026-01-08 19:55:58,087 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:55:59,836 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:56:56] 2026-01-08 19:56:25,160 | INFO     | PID=23476 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 14:56:56] 2026-01-08 19:56:25,160 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:56:56] 2026-01-08 19:56:25,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:56:56] 2026-01-08 19:56:25,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:56:56] 2026-01-08 19:56:48,900 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:56:56] 2026-01-08 19:56:50,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119723784000)>', '<ExcThread(monitor, started 140119113709312)>']
[2026-01-08 14:56:56] 2026-01-08 19:56:51,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:56:56] 2026-01-08 19:56:51,295 | INFO     | [monitor] control thread has ended
[2026-01-08 14:56:56] 2026-01-08 19:56:55,895 | INFO     | all workflow threads have been joined
[2026-01-08 14:56:56] 2026-01-08 19:56:55,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:56:56] 2026-01-08 19:56:55,895 | INFO     | traces error code: 0
[2026-01-08 14:56:56] 2026-01-08 19:56:55,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:56:56] 2026-01-08 19:56:56,005 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:56:56] 2026-01-08 19:56:56,010 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:56:56] 2026-01-08 19:56:56,015 [wrapper] pilotpid: 23476
[2026-01-08 14:56:56] 2026-01-08 19:56:56,019 [wrapper] Pilot exit status: 0
[2026-01-08 14:56:56] 2026-01-08 19:56:56,036 [wrapper] pandaids: 6962930845
[2026-01-08 14:56:56] 2026-01-08 19:56:56,096 [wrapper] cleanup supervisor_pilot 31125 23477
[2026-01-08 14:56:56] 2026-01-08 19:56:56,101 [wrapper] Test setup, not cleaning
[2026-01-08 14:56:56] 2026-01-08 19:56:56,106 [wrapper] apfmon messages muted
[2026-01-08 14:56:56] 2026-01-08 19:56:56,112 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:56:56] 2026-01-08 19:56:56,117 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:56:56]  *** Error codes and diagnostics ***
[2026-01-08 14:56:56]     "exeErrorCode": 0,
[2026-01-08 14:56:56]     "exeErrorDiag": "",
[2026-01-08 14:56:56]     "pilotErrorCode": 0,
[2026-01-08 14:56:56]     "pilotErrorDiag": "",
[2026-01-08 14:56:56]  *** Listing of results directory ***
[2026-01-08 14:56:56] total 565516
[2026-01-08 14:56:56] -rwx------ 1 boincer umatlas     36322 Jan  8 03:17 runpilot2-wrapper.sh
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:23 queuedata.json
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas       100 Jan  8 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:56:56] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 12:17 run_atlas
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas       105 Jan  8 12:17 job.xml
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas 418566624 Jan  8 12:17 EVNT.47961981._000005.pool.root.1
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas    592608 Jan  8 12:17 input.tar.gz
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 12:17 start_atlas.sh
[2026-01-08 14:56:56] drwxrwx--x 2 boincer umatlas      4096 Jan  8 12:17 shared
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas         0 Jan  8 12:17 boinc_lockfile
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas      2874 Jan  8 12:17 pandaJob.out
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas        57 Jan  8 12:17 setup.sh.local
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas    989837 Jan  8 12:17 agis_schedconf.cvmfs.json
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas   1516240 Jan  8 12:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:56:56] drwx------ 5 boincer umatlas      4096 Jan  8 12:17 pilot3
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas       529 Jan  8 14:45 boinc_task_state.xml
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas 151272326 Jan  8 14:55 HITS.47961985._000217.pool.root.1
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas      1055 Jan  8 14:55 memory_monitor_summary.json
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas   1307423 Jan  8 14:55 log.47961985._000217.job.log.tgz.1
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas        95 Jan  8 14:55 pilot_heartbeat.json
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas      8632 Jan  8 14:55 heartbeat.json
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas      5909 Jan  8 14:56 init_data.xml
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 14:56 boinc_mmap_file
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas        27 Jan  8 14:56 wrapper_checkpoint.txt
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas      4932 Jan  8 14:56 pilotlog.txt
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas   1354404 Jan  8 14:56 log.47961985._000217.job.log.1
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas       353 Jan  8 14:56 output.list
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas       620 Jan  8 14:56 runtime_log
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas   2682880 Jan  8 14:56 result.tar.gz
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas      9337 Jan  8 14:56 runtime_log.err
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas       661 Jan  8 14:56 cpeMDmPO0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDpeKDmAMv4Co.diag
[2026-01-08 14:56:56] -rw-r--r-- 1 boincer umatlas     21180 Jan  8 14:56 stderr.txt
[2026-01-08 14:56:56] HITS file was successfully produced:
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas 151272326 Jan  8 14:55 shared/HITS.pool.root.1
[2026-01-08 14:56:56]  *** Contents of shared directory: ***
[2026-01-08 14:56:56] total 559712
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas 418566624 Jan  8 12:17 ATLAS.root_0
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas    592608 Jan  8 12:17 input.tar.gz
[2026-01-08 14:56:56] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 12:17 start_atlas.sh
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas 151272326 Jan  8 14:55 HITS.pool.root.1
[2026-01-08 14:56:56] -rw------- 1 boincer umatlas   2682880 Jan  8 14:56 result.tar.gz
14:56:57 (19708): run_atlas exited; CPU time 69688.629776
14:56:57 (19708): called boinc_finish(0)

</stderr_txt>
]]>

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