Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:03:00 (3743967): wrapper (7.7.26015): starting
03:03:00 (3743967): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 03:03:00] Arguments: --nthreads 3
[2026-01-09 03:03:00] Threads: 3
[2026-01-09 03:03:00] Checking for CVMFS
[2026-01-09 03:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 03:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 03:03:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 03:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 03:03:00] 2.9.2.0 3347489 1631 77652 154926 0 57 15294521 36864000 0 130560 0 1002638 99.988 63206 18705 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 03:03:00] CVMFS is ok
[2026-01-09 03:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 03:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 03:03:00] Further information can be found at the LHC@home message board.
[2026-01-09 03:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 03:03:00] Checking for apptainer binary...
[2026-01-09 03:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 03:03:00] Running /usr/bin/apptainer --version
[2026-01-09 03:03:00] apptainer version 1.4.1-1.1
[2026-01-09 03:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 03:03:00] thA325a
[2026-01-09 03:03:00] apptainer works
[2026-01-09 03:03:00] Set ATHENA_PROC_NUMBER=3
[2026-01-09 03:03:00] Set ATHENA_CORE_NUMBER=3
[2026-01-09 03:03:00] Starting ATLAS job with PandaID=6962918819
[2026-01-09 03:03:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:56:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:56:19] 2026-01-09 03:55:44,831 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:56:19] 2026-01-09 03:55:44,840 | INFO     | cat /etc/os-release:
[2026-01-09 04:56:19] NAME="CentOS Linux"
[2026-01-09 04:56:19] VERSION="7 (Core)"
[2026-01-09 04:56:19] ID="centos"
[2026-01-09 04:56:19] ID_LIKE="rhel fedora"
[2026-01-09 04:56:19] VERSION_ID="7"
[2026-01-09 04:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:56:19] ANSI_COLOR="0;31"
[2026-01-09 04:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:56:19] HOME_URL="https://www.centos.org/"
[2026-01-09 04:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:56:19] 
[2026-01-09 04:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:56:19] 
[2026-01-09 04:56:19] 2026-01-09 03:55:44,840 | INFO     | ***************************************
[2026-01-09 04:56:19] 2026-01-09 03:55:45,343 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 04:56:19] 2026-01-09 03:55:45,357 | INFO     | sufficient remaining disk space (244516388864 B)
[2026-01-09 04:56:19] 2026-01-09 03:55:45,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:56:19] 2026-01-09 03:55:45,357 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:56:19] 2026-01-09 03:55:45,357 | INFO     | update_server=False
[2026-01-09 04:56:19] 2026-01-09 03:55:45,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:56:19] 2026-01-09 03:55:45,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:56:19] 2026-01-09 03:55:45,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:56:19] 2026-01-09 03:55:45,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:56:19] 2026-01-09 03:55:45,822 | INFO     | all data control threads have been joined
[2026-01-09 04:56:19] 2026-01-09 03:55:46,060 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:56:19] 2026-01-09 03:55:46,060 | INFO     | aborting loop
[2026-01-09 04:56:19] 2026-01-09 03:55:46,363 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:46,363 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:46,363 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:46,365 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:46,397 | INFO     | all job control threads have been joined
[2026-01-09 04:56:19] 2026-01-09 03:55:46,499 | INFO     | all payload control threads have been joined
[2026-01-09 04:56:19] 2026-01-09 03:55:46,828 | INFO     | [data] control thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,065 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,273 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,304 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,333 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,402 | INFO     | [job] control thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,505 | INFO     | [payload] control thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,671 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,733 | INFO     | [job] validate thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:47,733 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:55:49,364 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:56:19] 2026-01-09 03:56:13,800 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:56:19] 2026-01-09 03:56:14,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024871765824)>', '<ExcThread(monitor, started 140024238561024)>']
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | INFO     | PID=3747690 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:56:19] 2026-01-09 03:56:16,329 | INFO     | [monitor] control thread has ended
[2026-01-09 04:56:19] 2026-01-09 03:56:19,187 | INFO     | all workflow threads have been joined
[2026-01-09 04:56:19] 2026-01-09 03:56:19,187 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:56:19] 2026-01-09 03:56:19,187 | INFO     | traces error code: 0
[2026-01-09 04:56:19] 2026-01-09 03:56:19,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:56:19] 2026-01-09 03:56:19,241 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:56:19] 2026-01-09 03:56:19,243 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:56:19] 2026-01-09 03:56:19,246 [wrapper] pilotpid: 3747690
[2026-01-09 04:56:19] 2026-01-09 03:56:19,248 [wrapper] Pilot exit status: 0
[2026-01-09 04:56:19] 2026-01-09 03:56:19,255 [wrapper] pandaids: 6962918819
[2026-01-09 04:56:19] 2026-01-09 03:56:19,272 [wrapper] cleanup supervisor_pilot 3769459 3747691
[2026-01-09 04:56:19] 2026-01-09 03:56:19,274 [wrapper] Test setup, not cleaning
[2026-01-09 04:56:19] 2026-01-09 03:56:19,277 [wrapper] apfmon messages muted
[2026-01-09 04:56:19] 2026-01-09 03:56:19,279 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:56:19] 2026-01-09 03:56:19,281 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:56:19]  *** Error codes and diagnostics ***
[2026-01-09 04:56:19]     "exeErrorCode": 0,
[2026-01-09 04:56:19]     "exeErrorDiag": "",
[2026-01-09 04:56:19]     "pilotErrorCode": 0,
[2026-01-09 04:56:19]     "pilotErrorDiag": "",
[2026-01-09 04:56:19]  *** Listing of results directory ***
[2026-01-09 04:56:19] total 439504
[2026-01-09 04:56:19] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:09 pilot3.tar.gz
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc       100 Jan  9 03:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:56:19] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 03:03 run_atlas
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc       105 Jan  9 03:03 job.xml
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc 223775780 Jan  9 03:03 EVNT.47898824._000327.pool.root.1
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc    592398 Jan  9 03:03 input.tar.gz
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 03:03 start_atlas.sh
[2026-01-09 04:56:19] drwxrwx--x 2 boinc boinc      4096 Jan  9 03:03 shared
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 03:03 boinc_setup_complete
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      6440 Jan  9 03:03 init_data.xml
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc         0 Jan  9 03:03 boinc_lockfile
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      2519 Jan  9 03:03 pandaJob.out
[2026-01-09 04:56:19] -rw------- 1 boinc boinc    989821 Jan  9 03:03 agis_schedconf.cvmfs.json
[2026-01-09 04:56:19] -rw------- 1 boinc boinc   1516240 Jan  9 03:03 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:56:19] drwx------ 5 boinc boinc      4096 Jan  9 03:03 pilot3
[2026-01-09 04:56:19] -rw------- 1 boinc boinc 219851761 Jan  9 04:55 HITS.47898826._020839.pool.root.1
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc       529 Jan  9 04:55 boinc_task_state.xml
[2026-01-09 04:56:19] -rw------- 1 boinc boinc      1017 Jan  9 04:55 memory_monitor_summary.json
[2026-01-09 04:56:19] -rw------- 1 boinc boinc    282668 Jan  9 04:55 log.47898826._020839.job.log.tgz.1
[2026-01-09 04:56:19] -rw------- 1 boinc boinc        95 Jan  9 04:55 pilot_heartbeat.json
[2026-01-09 04:56:19] -rw------- 1 boinc boinc      7756 Jan  9 04:55 heartbeat.json
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      8192 Jan  9 04:55 boinc_mmap_file
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc        27 Jan  9 04:55 wrapper_checkpoint.txt
[2026-01-09 04:56:19] -rw------- 1 boinc boinc      4752 Jan  9 04:56 pilotlog.txt
[2026-01-09 04:56:19] -rw------- 1 boinc boinc    976083 Jan  9 04:56 log.47898826._020839.job.log.1
[2026-01-09 04:56:19] -rw------- 1 boinc boinc       357 Jan  9 04:56 output.list
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc       620 Jan  9 04:56 runtime_log
[2026-01-09 04:56:19] -rw------- 1 boinc boinc   1280000 Jan  9 04:56 result.tar.gz
[2026-01-09 04:56:19] -rw------- 1 boinc boinc       660 Jan  9 04:56 zMlKDmmB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcZeKDmReEbln.diag
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      8902 Jan  9 04:56 runtime_log.err
[2026-01-09 04:56:19] -rw-r--r-- 1 boinc boinc      8886 Jan  9 04:56 stderr.txt
[2026-01-09 04:56:19] HITS file was successfully produced:
[2026-01-09 04:56:19] -rw------- 1 boinc boinc 219851761 Jan  9 04:55 shared/HITS.pool.root.1
[2026-01-09 04:56:19]  *** Contents of shared directory: ***
[2026-01-09 04:56:19] total 435088
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc 223775780 Jan  9 03:03 ATLAS.root_0
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc    592398 Jan  9 03:03 input.tar.gz
[2026-01-09 04:56:19] -rw-r--r-- 2 boinc boinc     15847 Jan  9 03:03 start_atlas.sh
[2026-01-09 04:56:19] -rw------- 1 boinc boinc 219851761 Jan  9 04:55 HITS.pool.root.1
[2026-01-09 04:56:19] -rw------- 1 boinc boinc   1280000 Jan  9 04:56 result.tar.gz
04:56:21 (3743967): run_atlas exited; CPU time 19601.524220
04:56:21 (3743967): called boinc_finish(0)

</stderr_txt>
]]>

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