Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:53 (2420533): wrapper (7.7.26015): starting
01:26:53 (2420533): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 01:26:53] Arguments: --nthreads 3
[2026-01-09 01:26:53] Threads: 3
[2026-01-09 01:26:53] Checking for CVMFS
[2026-01-09 01:26:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:26:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:26:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:26:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:26:54] 2.9.2.0 2215334 856 65640 154925 2 56 21279939 36864000 0 130560 0 568633 99.987 35688 17746 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 01:26:54] CVMFS is ok
[2026-01-09 01:26:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:26:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:26:54] Further information can be found at the LHC@home message board.
[2026-01-09 01:26:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:26:54] Checking for apptainer binary...
[2026-01-09 01:26:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:26:54] Running /usr/bin/apptainer --version
[2026-01-09 01:26:54] apptainer version 1.4.1-1.1
[2026-01-09 01:26:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:26:54] thA333
[2026-01-09 01:26:54] apptainer works
[2026-01-09 01:26:54] Set ATHENA_PROC_NUMBER=3
[2026-01-09 01:26:54] Set ATHENA_CORE_NUMBER=3
[2026-01-09 01:26:54] Starting ATLAS job with PandaID=6962916222
[2026-01-09 01:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:30:22]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:30:22] 2026-01-09 02:29:44,553 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:44,554 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:44,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:30:22] 2026-01-09 02:29:44,846 | INFO     | [payload] control thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:44,999 | INFO     | [data] control thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,040 | INFO     | [job] control thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,123 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,459 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,505 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,544 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,591 | INFO     | [job] validate thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:45,638 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:46,141 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:46,686 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:47,554 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:29:54,071 | INFO     | job.realtimelogging is not enabled
[2026-01-09 03:30:22] 2026-01-09 02:29:55,076 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:30:22] 2026-01-09 02:30:12,244 | INFO     | 7358s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 03:30:22] 2026-01-09 02:30:13,301 | INFO     | PID=2424264 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 03:30:22] 2026-01-09 02:30:13,301 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:30:22] 2026-01-09 02:30:13,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:30:22] 2026-01-09 02:30:13,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:30:22] 2026-01-09 02:30:15,978 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:30:22] 2026-01-09 02:30:17,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549291284288)>', '<ExcThread(monitor, started 140548543330048)>']
[2026-01-09 03:30:22] 2026-01-09 02:30:17,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:30:22] 2026-01-09 02:30:17,323 | INFO     | [monitor] control thread has ended
[2026-01-09 03:30:22] 2026-01-09 02:30:22,257 | INFO     | all workflow threads have been joined
[2026-01-09 03:30:22] 2026-01-09 02:30:22,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:30:22] 2026-01-09 02:30:22,258 | INFO     | traces error code: 0
[2026-01-09 03:30:22] 2026-01-09 02:30:22,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:30:22] 2026-01-09 02:30:22,306 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:30:22] 2026-01-09 02:30:22,309 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:30:22] 2026-01-09 02:30:22,311 [wrapper] pilotpid: 2424264
[2026-01-09 03:30:22] 2026-01-09 02:30:22,314 [wrapper] Pilot exit status: 0
[2026-01-09 03:30:22] 2026-01-09 02:30:22,321 [wrapper] pandaids: 6962916222
[2026-01-09 03:30:22] 2026-01-09 02:30:22,338 [wrapper] cleanup supervisor_pilot 2445550 2424265
[2026-01-09 03:30:22] 2026-01-09 02:30:22,341 [wrapper] Test setup, not cleaning
[2026-01-09 03:30:22] 2026-01-09 02:30:22,343 [wrapper] apfmon messages muted
[2026-01-09 03:30:22] 2026-01-09 02:30:22,345 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:30:22] 2026-01-09 02:30:22,348 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:30:22]  *** Error codes and diagnostics ***
[2026-01-09 03:30:22]     "exeErrorCode": 0,
[2026-01-09 03:30:22]     "exeErrorDiag": "",
[2026-01-09 03:30:22]     "pilotErrorCode": 0,
[2026-01-09 03:30:22]     "pilotErrorDiag": "",
[2026-01-09 03:30:22]  *** Listing of results directory ***
[2026-01-09 03:30:22] total 440048
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-09 03:30:22] -rwx------ 1 boinc boinc     36322 Jan  8 09:03 runpilot2-wrapper.sh
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:05 queuedata.json
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc       100 Jan  9 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:30:22] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 01:26 run_atlas
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc       105 Jan  9 01:26 job.xml
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc 225538109 Jan  9 01:26 EVNT.47898824._000450.pool.root.1
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc    592404 Jan  9 01:26 input.tar.gz
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:26 start_atlas.sh
[2026-01-09 03:30:22] drwxrwx--x 2 boinc boinc      4096 Jan  9 01:26 shared
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:26 boinc_setup_complete
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      6196 Jan  9 01:26 init_data.xml
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:26 boinc_lockfile
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      2518 Jan  9 01:26 pandaJob.out
[2026-01-09 03:30:22] -rw------- 1 boinc boinc    989837 Jan  9 01:27 agis_schedconf.cvmfs.json
[2026-01-09 03:30:22] -rw------- 1 boinc boinc   1516240 Jan  9 01:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:30:22] drwx------ 5 boinc boinc      4096 Jan  9 01:27 pilot3
[2026-01-09 03:30:22] -rw------- 1 boinc boinc 218478347 Jan  9 03:29 HITS.47898826._018809.pool.root.1
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc       529 Jan  9 03:29 boinc_task_state.xml
[2026-01-09 03:30:22] -rw------- 1 boinc boinc      1015 Jan  9 03:29 memory_monitor_summary.json
[2026-01-09 03:30:22] -rw------- 1 boinc boinc    285383 Jan  9 03:29 log.47898826._018809.job.log.tgz.1
[2026-01-09 03:30:22] -rw------- 1 boinc boinc        95 Jan  9 03:29 pilot_heartbeat.json
[2026-01-09 03:30:22] -rw------- 1 boinc boinc      7754 Jan  9 03:29 heartbeat.json
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      8192 Jan  9 03:29 boinc_mmap_file
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc        27 Jan  9 03:29 wrapper_checkpoint.txt
[2026-01-09 03:30:22] -rw------- 1 boinc boinc      4939 Jan  9 03:30 pilotlog.txt
[2026-01-09 03:30:22] -rw------- 1 boinc boinc   1060912 Jan  9 03:30 log.47898826._018809.job.log.1
[2026-01-09 03:30:22] -rw------- 1 boinc boinc       357 Jan  9 03:30 output.list
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc       620 Jan  9 03:30 runtime_log
[2026-01-09 03:30:22] -rw------- 1 boinc boinc   1361920 Jan  9 03:30 result.tar.gz
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      8897 Jan  9 03:30 runtime_log.err
[2026-01-09 03:30:22] -rw------- 1 boinc boinc       659 Jan  9 03:30 Jb4NDmPA0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeYjKDmDItMKm.diag
[2026-01-09 03:30:22] -rw-r--r-- 1 boinc boinc      6560 Jan  9 03:30 stderr.txt
[2026-01-09 03:30:22] HITS file was successfully produced:
[2026-01-09 03:30:22] -rw------- 1 boinc boinc 218478347 Jan  9 03:29 shared/HITS.pool.root.1
[2026-01-09 03:30:22]  *** Contents of shared directory: ***
[2026-01-09 03:30:22] total 435552
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc 225538109 Jan  9 01:26 ATLAS.root_0
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc    592404 Jan  9 01:26 input.tar.gz
[2026-01-09 03:30:22] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:26 start_atlas.sh
[2026-01-09 03:30:22] -rw------- 1 boinc boinc 218478347 Jan  9 03:29 HITS.pool.root.1
[2026-01-09 03:30:22] -rw------- 1 boinc boinc   1361920 Jan  9 03:30 result.tar.gz
03:30:24 (2420533): run_atlas exited; CPU time 21373.452121
03:30:24 (2420533): called boinc_finish(0)

</stderr_txt>
]]>

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