Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:35:07 (29263): wrapper (7.7.26015): starting
00:35:07 (29263): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:35:07] Arguments: --nthreads 8
[2026-01-09 00:35:07] Threads: 8
[2026-01-09 00:35:07] Checking for CVMFS
[2026-01-09 00:35:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:35:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:35:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:35:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:35:10] 2.11.2.0 10325 34641 97744 154924 0 60 15517257 25165825 96 130560 0 14671409 99.837 9581671 4085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 00:35:10] CVMFS is ok
[2026-01-09 00:35:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:35:10] Checking for apptainer binary...
[2026-01-09 00:35:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:35:10] Running /usr/bin/apptainer --version
[2026-01-09 00:35:10] apptainer version 1.3.2-1.el7
[2026-01-09 00:35:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:35:23] cg-vwn405.simple-grid.lan
[2026-01-09 00:35:23] apptainer works
[2026-01-09 00:35:23] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:35:23] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:35:23] Starting ATLAS job with PandaID=6962931592
[2026-01-09 00:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:56:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:56:36] 2026-01-09 04:56:11,309 | INFO     | job 6962931592 has state=finished
[2026-01-09 05:56:36] 2026-01-09 04:56:11,309 | INFO     | preparing for final server update for job 6962931592 in state='finished'
[2026-01-09 05:56:36] 2026-01-09 04:56:11,310 | INFO     | this job has now completed (state=finished)
[2026-01-09 05:56:36] 2026-01-09 04:56:11,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 05:56:36] 2026-01-09 04:56:11,310 | INFO     | log transfer has been attempted: DONE
[2026-01-09 05:56:36] 2026-01-09 04:56:11,311 | INFO     | job 6962931592 has finished - writing final server update
[2026-01-09 05:56:36] 2026-01-09 04:56:11,311 | INFO     | total number of processed events: 150 (read)
[2026-01-09 05:56:36] 2026-01-09 04:56:11,312 | INFO     | executing command: lscpu
[2026-01-09 05:56:36] 2026-01-09 04:56:11,334 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 05:56:36] 2026-01-09 04:56:11,496 | INFO     | time since job start (18972s) is within the limit (174528.0s)
[2026-01-09 05:56:36] 2026-01-09 04:56:13,011 | INFO     | monitor loop #1355: job 0:6962931592 is in state 'finished'
[2026-01-09 05:56:36] 2026-01-09 04:56:13,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:56:36] 2026-01-09 04:56:13,501 | INFO     | time since job start (18974s) is within the limit (174528.0s)
[2026-01-09 05:56:36] 2026-01-09 04:56:15,506 | INFO     | time since job start (18976s) is within the limit (174528.0s)
[2026-01-09 05:56:36] 2026-01-09 04:56:15,515 | INFO     | monitor loop #1356: job 0:6962931592 is in state 'finished'
[2026-01-09 05:56:36] 2026-01-09 04:56:15,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,914 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 05:56:36] 2026-01-09 04:56:16,915 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 05:56:36] 2026-01-09 04:56:16,917 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6962931592/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,918 | INFO     | extracted standard info from prmon json
[2026-01-09 05:56:36] 2026-01-09 04:56:16,918 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:56:36] 2026-01-09 04:56:16,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:56:36] 2026-01-09 04:56:16,925 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:56:36] 2026-01-09 04:56:16,926 | INFO     | sum of square deviations: 8540727107.483476
[2026-01-09 05:56:36] 2026-01-09 04:56:16,929 | INFO     | sum of deviations: 595360976041.3973
[2026-01-09 05:56:36] 2026-01-09 04:56:16,929 | INFO     | mean x: 1767925374.3178809
[2026-01-09 05:56:36] 2026-01-09 04:56:16,929 | INFO     | mean y: 2395556.8708609273
[2026-01-09 05:56:36] 2026-01-09 04:56:16,929 | INFO     | intersect: -123236968396.11008
[2026-01-09 05:56:36] 2026-01-09 04:56:16,930 | INFO     | chi2: 30.674045708205746
[2026-01-09 05:56:36] 2026-01-09 04:56:16,930 | INFO     | sum of square deviations: 8123576011.582528
[2026-01-09 05:56:36] 2026-01-09 04:56:16,933 | INFO     | sum of deviations: 660661169438.9436
[2026-01-09 05:56:36] 2026-01-09 04:56:16,933 | INFO     | mean x: 1767925221.8316498
[2026-01-09 05:56:36] 2026-01-09 04:56:16,934 | INFO     | mean y: 2419334.218855219
[2026-01-09 05:56:36] 2026-01-09 04:56:16,934 | INFO     | intersect: -143776569484.3233
[2026-01-09 05:56:36] 2026-01-09 04:56:16,934 | INFO     | chi2: 28.487814112254483
[2026-01-09 05:56:36] 2026-01-09 04:56:16,934 | INFO     | current chi2=28.487814112254483 (change=7.127301096009042 %)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,935 | INFO     | right removable region: 296
[2026-01-09 05:56:36] 2026-01-09 04:56:16,935 | INFO     | sum of square deviations: 8123425341.582528
[2026-01-09 05:56:36] 2026-01-09 04:56:16,938 | INFO     | sum of deviations: 485361730457.3436
[2026-01-09 05:56:36] 2026-01-09 04:56:16,938 | INFO     | mean x: 1767925526.8316498
[2026-01-09 05:56:36] 2026-01-09 04:56:16,938 | INFO     | mean y: 2435761.6868686867
[2026-01-09 05:56:36] 2026-01-09 04:56:16,938 | INFO     | intersect: -105628299665.93224
[2026-01-09 05:56:36] 2026-01-09 04:56:16,939 | INFO     | chi2: 24.006912593957054
[2026-01-09 05:56:36] 2026-01-09 04:56:16,939 | INFO     | current chi2=24.006912593957054 (change=21.735421462403114 %)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,939 | INFO     | left removable region: 10
[2026-01-09 05:56:36] 2026-01-09 04:56:16,940 | INFO     | sum of square deviations: 7253840840.181809
[2026-01-09 05:56:36] 2026-01-09 04:56:16,943 | INFO     | sum of deviations: 453819143850.45483
[2026-01-09 05:56:36] 2026-01-09 04:56:16,943 | INFO     | mean x: 1767925496.3636363
[2026-01-09 05:56:36] 2026-01-09 04:56:16,943 | INFO     | mean y: 2502028.486013986
[2026-01-09 05:56:36] 2026-01-09 04:56:16,943 | INFO     | intersect: -110603513850.27245
[2026-01-09 05:56:36] 2026-01-09 04:56:16,943 | INFO     | chi2: 16.212141524712614
[2026-01-09 05:56:36] 2026-01-09 04:56:16,944 | INFO     | current memory leak: 62.56 B/s (using 286 data points, chi2=16.21)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,944 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | ..............................
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . Timing measurements:
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . get job = 0 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . initial setup = 10 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . payload setup = 204 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . stage-in = 0 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . payload execution = 18552 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,945 | INFO     | . stage-out = 1 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,946 | INFO     | . log creation = 0 s
[2026-01-09 05:56:36] 2026-01-09 04:56:16,946 | INFO     | ..............................
[2026-01-09 05:56:36] 2026-01-09 04:56:17,508 | INFO     | 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | job summary report
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | --------------------------------------------------
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | PanDA job id: 6962931592
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | task id: 47961985
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | errors: (none)
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | pilot state: finished 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,509 | INFO     | transexitcode: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | exeerrorcode: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | exeerrordiag: 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | exitcode: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | exitmsg: OK
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | cpuconsumptiontime: 66179 s
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | nevents: 150
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | neventsw: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | pid: 7050
[2026-01-09 05:56:36] 2026-01-09 04:56:17,510 | INFO     | pgrp: 7050
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | corecount: 8
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | event service: False
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | sizes: {0: 2284377, 1: 2284576, 12: 2284576, 23: 2284604, 33: 2284632, 44: 2284688, 55: 2284844, 66: 2284872, 76: 2284900, 87: 2284956, 98: 2284984, 104: 2285554, 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | --------------------------------------------------
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | 
[2026-01-09 05:56:36] 2026-01-09 04:56:17,511 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 05:56:36] 2026-01-09 04:56:17,515 | INFO     | time since job start (18978s) is within the limit (174528.0s)
[2026-01-09 05:56:36] 2026-01-09 04:56:17,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,534 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | job 6962931592 has completed (purged errors)
[2026-01-09 05:56:36] 2026-01-09 04:56:17,536 | INFO     | overall cleanup function is called
[2026-01-09 05:56:36] 2026-01-09 04:56:18,551 | INFO     | --- collectZombieJob: --- 10, [7050]
[2026-01-09 05:56:36] 2026-01-09 04:56:18,551 | INFO     | zombie collector waiting for pid 7050
[2026-01-09 05:56:36] 2026-01-09 04:56:18,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:56:36] 2026-01-09 04:56:18,551 | INFO     | collected zombie processes
[2026-01-09 05:56:36] 2026-01-09 04:56:18,551 | INFO     | will attempt to kill all subprocesses of pid=7050
[2026-01-09 05:56:36] 2026-01-09 04:56:18,609 | INFO     | process IDs to be killed: [7050] (in reverse order)
[2026-01-09 05:56:36] 2026-01-09 04:56:18,671 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:56:36] 2026-01-09 04:56:18,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:56:36] 2026-01-09 04:56:18,673 | INFO     | did not find any defunct processes belonging to 7050
[2026-01-09 05:56:36] 2026-01-09 04:56:18,674 | INFO     | did not find any defunct processes belonging to 7050
[2026-01-09 05:56:36] 2026-01-09 04:56:18,675 | INFO     | ready for new job
[2026-01-09 05:56:36] 2026-01-09 04:56:18,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:56:36] 2026-01-09 04:56:18,677 | INFO     | ***************************************
[2026-01-09 05:56:36] 2026-01-09 04:56:18,677 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:56:36] 2026-01-09 04:56:18,677 | INFO     | ***************************************
[2026-01-09 05:56:36] 2026-01-09 04:56:18,677 | INFO     | 
[2026-01-09 05:56:36] 2026-01-09 04:56:18,678 | INFO     | pilot is running in a VM
[2026-01-09 05:56:36] 2026-01-09 04:56:18,678 | INFO     | architecture information:
[2026-01-09 05:56:36] 2026-01-09 04:56:18,679 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:56:36] 2026-01-09 04:56:18,707 | INFO     | cat /etc/os-release:
[2026-01-09 05:56:36] NAME="CentOS Linux"
[2026-01-09 05:56:36] VERSION="7 (Core)"
[2026-01-09 05:56:36] ID="centos"
[2026-01-09 05:56:36] ID_LIKE="rhel fedora"
[2026-01-09 05:56:36] VERSION_ID="7"
[2026-01-09 05:56:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:56:36] ANSI_COLOR="0;31"
[2026-01-09 05:56:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:56:36] HOME_URL="https://www.centos.org/"
[2026-01-09 05:56:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:56:36] 
[2026-01-09 05:56:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:56:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:56:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:56:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:56:36] 
[2026-01-09 05:56:36] 2026-01-09 04:56:18,708 | INFO     | ***************************************
[2026-01-09 05:56:36] 2026-01-09 04:56:19,211 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 05:56:36] 2026-01-09 04:56:19,242 | INFO     | sufficient remaining disk space (497824038912 B)
[2026-01-09 05:56:36] 2026-01-09 04:56:19,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:56:36] 2026-01-09 04:56:19,242 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:56:36] 2026-01-09 04:56:19,243 | INFO     | update_server=False
[2026-01-09 05:56:36] 2026-01-09 04:56:19,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:56:36] 2026-01-09 04:56:19,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 05:56:36] 2026-01-09 04:56:19,243 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:56:36] 2026-01-09 04:56:19,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:56:36] 2026-01-09 04:56:19,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:56:36] 2026-01-09 04:56:19,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:56:36] 2026-01-09 04:56:19,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:56:36] 2026-01-09 04:56:19,245 | INFO     | aborting loop
[2026-01-09 05:56:36] 2026-01-09 04:56:19,787 | INFO     | all data control threads have been joined
[2026-01-09 05:56:36] 2026-01-09 04:56:20,248 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:20,251 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:20,431 | INFO     | all payload control threads have been joined
[2026-01-09 05:56:36] 2026-01-09 04:56:20,584 | INFO     | all job control threads have been joined
[2026-01-09 05:56:36] 2026-01-09 04:56:20,793 | INFO     | [data] control thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:20,828 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:20,856 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:20,984 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,251 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,437 | INFO     | [payload] control thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,502 | INFO     | [job] validate thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,506 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,590 | INFO     | [job] control thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,649 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,692 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:21,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:56:36] 2026-01-09 04:56:22,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:56:36] 2026-01-09 04:56:23,077 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:25,826 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:30,032 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:56:36] 2026-01-09 04:56:30,959 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:56:36] 2026-01-09 04:56:31,038 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:56:36] 2026-01-09 04:56:31,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531762911040)>', '<ExcThread(monitor, started 140531170526976)>']
[2026-01-09 05:56:36] 2026-01-09 04:56:32,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:56:36] 2026-01-09 04:56:32,308 | INFO     | [monitor] control thread has ended
[2026-01-09 05:56:36] 2026-01-09 04:56:36,655 | INFO     | all workflow threads have been joined
[2026-01-09 05:56:36] 2026-01-09 04:56:36,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:56:36] 2026-01-09 04:56:36,656 | INFO     | traces error code: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:36,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:56:36] 2026-01-09 04:56:36,783 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:56:36] 2026-01-09 04:56:36,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:56:36] 2026-01-09 04:56:36,791 [wrapper] pilotpid: 544
[2026-01-09 05:56:36] 2026-01-09 04:56:36,795 [wrapper] Pilot exit status: 0
[2026-01-09 05:56:36] 2026-01-09 04:56:36,809 [wrapper] pandaids: 6962931592
[2026-01-09 05:56:36] 2026-01-09 04:56:36,838 [wrapper] cleanup supervisor_pilot  5286 545
[2026-01-09 05:56:36] 2026-01-09 04:56:36,842 [wrapper] Test setup, not cleaning
[2026-01-09 05:56:36] 2026-01-09 04:56:36,846 [wrapper] apfmon messages muted
[2026-01-09 05:56:36] 2026-01-09 04:56:36,850 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:56:36] 2026-01-09 04:56:36,853 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:56:36]  *** Error codes and diagnostics ***
[2026-01-09 05:56:36]     "exeErrorCode": 0,
[2026-01-09 05:56:36]     "exeErrorDiag": "",
[2026-01-09 05:56:36]     "pilotErrorCode": 0,
[2026-01-09 05:56:36]     "pilotErrorDiag": "",
[2026-01-09 05:56:36]  *** Listing of results directory ***
[2026-01-09 05:56:36] total 562204
[2026-01-09 05:56:36] -rwx------. 1 boinc boinc     36322 Jan  8 09:21 runpilot2-wrapper.sh
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc       100 Jan  9 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:56:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 00:35 run_atlas
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc       105 Jan  9 00:35 job.xml
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc      6391 Jan  9 00:35 init_data.xml
[2026-01-09 05:56:36] -rw-r--r--. 2 boinc boinc 416420645 Jan  9 00:35 EVNT.47961981._000026.pool.root.1
[2026-01-09 05:56:36] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:35 start_atlas.sh
[2026-01-09 05:56:36] drwxrwx--x. 2 boinc boinc        68 Jan  9 00:35 shared
[2026-01-09 05:56:36] -rw-r--r--. 2 boinc boinc    592602 Jan  9 00:35 input.tar.gz
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc         0 Jan  9 00:35 boinc_lockfile
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc      2875 Jan  9 00:35 pandaJob.out
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc    989837 Jan  9 00:39 agis_schedconf.cvmfs.json
[2026-01-09 05:56:36] drwx------. 5 boinc boinc      4096 Jan  9 00:39 pilot3
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc       530 Jan  9 05:47 boinc_task_state.xml
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc 147459622 Jan  9 05:55 HITS.47961985._000724.pool.root.1
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc      1023 Jan  9 05:56 memory_monitor_summary.json
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc        95 Jan  9 05:56 pilot_heartbeat.json
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc   1516240 Jan  9 05:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc   1418268 Jan  9 05:56 log.47961985._000724.job.log.tgz.1
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc      8605 Jan  9 05:56 heartbeat.json
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:56 boinc_mmap_file
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:56 wrapper_checkpoint.txt
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc      4687 Jan  9 05:56 pilotlog.txt
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc   2539618 Jan  9 05:56 log.47961985._000724.job.log.1
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc       353 Jan  9 05:56 output.list
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:56 runtime_log
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc   3973120 Jan  9 05:56 result.tar.gz
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:56 runtime_log.err
[2026-01-09 05:56:36] -rw-------. 1 boinc boinc       657 Jan  9 05:56 i6rLDmuR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7veKDmvmD3Ko.diag
[2026-01-09 05:56:36] -rw-r--r--. 1 boinc boinc     21195 Jan  9 05:56 stderr.txt
[2026-01-09 05:56:36] HITS file was successfully produced:
[2026-01-09 05:56:37] -rw-------. 1 boinc boinc 147459622 Jan  9 05:55 shared/HITS.pool.root.1
[2026-01-09 05:56:37]  *** Contents of shared directory: ***
[2026-01-09 05:56:37] total 555144
[2026-01-09 05:56:37] -rw-r--r--. 2 boinc boinc 416420645 Jan  9 00:35 ATLAS.root_0
[2026-01-09 05:56:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:35 start_atlas.sh
[2026-01-09 05:56:37] -rw-r--r--. 2 boinc boinc    592602 Jan  9 00:35 input.tar.gz
[2026-01-09 05:56:37] -rw-------. 1 boinc boinc 147459622 Jan  9 05:55 HITS.pool.root.1
[2026-01-09 05:56:37] -rw-------. 1 boinc boinc   3973120 Jan  9 05:56 result.tar.gz
05:56:38 (29263): run_atlas exited; CPU time 66256.356921
05:56:38 (29263): called boinc_finish(0)

</stderr_txt>
]]>

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