Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
19:19:12 (2938254): wrapper (7.7.26015): starting
19:19:12 (2938254): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 19:19:12] Arguments: --nthreads 12
[2026-01-08 19:19:12] Threads: 12
[2026-01-08 19:19:12] Checking for CVMFS
[2026-01-08 19:19:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:19:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:19:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:19:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:19:12] 2.13.0.0 2697806 611 78844 154916 2 57 5072442 6144000 0 130560 0 710000 99.992 30310 708 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 19:19:12] CVMFS is ok
[2026-01-08 19:19:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 19:19:12] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 19:19:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 19:19:12] Further information can be found at the LHC@home message board.
[2026-01-08 19:19:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:19:12] Checking for apptainer binary...
[2026-01-08 19:19:12] apptainer is not installed, using version from CVMFS
[2026-01-08 19:19:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:19:12] Debian-bookworm-latest-amd64-base
[2026-01-08 19:19:12] apptainer works
[2026-01-08 19:19:12] Set ATHENA_PROC_NUMBER=12
[2026-01-08 19:19:12] Set ATHENA_CORE_NUMBER=12
[2026-01-08 19:19:12] Starting ATLAS job with PandaID=6962931408
[2026-01-08 19:19:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 20:12:28]  *** The last 200 lines of the pilot log: ***
[2026-01-08 20:12:28] 2026-01-08 19:12:06,008 | INFO     | summary of transferred files:
[2026-01-08 20:12:28] 2026-01-08 19:12:06,008 | INFO     |  -- lfn=log.47961985._000540.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 20:12:28] 2026-01-08 19:12:06,009 | INFO     | stage-out finished correctly
[2026-01-08 20:12:28] 2026-01-08 19:12:06,444 | INFO     | time since job start (3168s) is within the limit (174528.0s)
[2026-01-08 20:12:28] 2026-01-08 19:12:07,480 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 20:12:28] 2026-01-08 19:12:08,449 | INFO     | time since job start (3170s) is within the limit (174528.0s)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,868 | WARNING  | process 2948847 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 20:12:28] 2026-01-08 19:12:08,869 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,869 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | WARNING  | maxPSS not found in memory monitor output
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4314076 B
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 197902 B
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13479 B
[2026-01-08 20:12:28] 2026-01-08 19:12:08,870 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-08 20:12:28] 2026-01-08 19:12:08,886 | INFO     | sufficient remaining disk space (710368296960 B)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,886 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,888 | INFO     | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408: 9309111 B (within 4404019200 B limit)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,888 | INFO     | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408/HITS.47961985._000540.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,888 | INFO     | total size of present files: 0 B (workdir size: 9309111 B)
[2026-01-08 20:12:28] 2026-01-08 19:12:08,888 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408/HITS.47961985._000540.pool.root.1 since it does not exist
[2026-01-08 20:12:28] 2026-01-08 19:12:08,922 | INFO     | number of running child processes to parent process 2948847: 1
[2026-01-08 20:12:28] 2026-01-08 19:12:08,922 | INFO     | maximum number of monitored processes: 20
[2026-01-08 20:12:28] 2026-01-08 19:12:10,454 | INFO     | time since job start (3172s) is within the limit (174528.0s)
[2026-01-08 20:12:28] 2026-01-08 19:12:10,500 | INFO     | job 6962931408 has state=finished
[2026-01-08 20:12:28] 2026-01-08 19:12:10,501 | INFO     | preparing for final server update for job 6962931408 in state='finished'
[2026-01-08 20:12:28] 2026-01-08 19:12:10,501 | INFO     | this job has now completed (state=finished)
[2026-01-08 20:12:28] 2026-01-08 19:12:10,501 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 20:12:28] 2026-01-08 19:12:10,501 | INFO     | log transfer has been attempted: DONE
[2026-01-08 20:12:28] 2026-01-08 19:12:10,501 | INFO     | job 6962931408 has finished - writing final server update
[2026-01-08 20:12:28] 2026-01-08 19:12:10,502 | INFO     | total number of processed events: 150 (read)
[2026-01-08 20:12:28] 2026-01-08 19:12:10,503 | INFO     | executing command: lscpu
[2026-01-08 20:12:28] 2026-01-08 19:12:10,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 20:12:28] 2026-01-08 19:12:11,425 | INFO     | monitor loop #237: job 0:6962931408 is in state 'finished'
[2026-01-08 20:12:28] 2026-01-08 19:12:11,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:12:28] 2026-01-08 19:12:12,458 | INFO     | time since job start (3174s) is within the limit (174528.0s)
[2026-01-08 20:12:28] 2026-01-08 19:12:13,928 | INFO     | monitor loop #238: job 0:6962931408 is in state 'finished'
[2026-01-08 20:12:28] 2026-01-08 19:12:13,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,113 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 20:12:28] 2026-01-08 19:12:14,114 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3722.1149374999995
[2026-01-08 20:12:28] 2026-01-08 19:12:14,116 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6962931408/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,116 | INFO     | extracted standard info from prmon json
[2026-01-08 20:12:28] 2026-01-08 19:12:14,116 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 20:12:28] 2026-01-08 19:12:14,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | fitting pss+swap vs Time
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | sum of square deviations: 28242659.911111116
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | sum of deviations: 2200047917.466666
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | mean x: 1767898024.1555555
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | mean y: 3418217.933333333
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | intersect: -137712376915.32492
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | chi2: 0.1125474926738427
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | current memory leak: 77.90 B/s (using 45 data points, chi2=0.11)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | could have reported an average CPU frequency of 3913 MHz (5 samples)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | ..............................
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | . Timing measurements:
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | . get job = 0 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | . initial setup = 1 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,117 | INFO     | . payload setup = 3 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,118 | INFO     | . stage-in = 0 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,118 | INFO     | . payload execution = 3146 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,118 | INFO     | . stage-out = 0 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,118 | INFO     | . log creation = 0 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,118 | INFO     | ..............................
[2026-01-08 20:12:28] 2026-01-08 19:12:14,462 | INFO     | time since job start (3176s) is within the limit (174528.0s)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | 
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | job summary report
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | --------------------------------------------------
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | PanDA job id: 6962931408
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | task id: 47961985
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | errors: (none)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | pilot state: finished 
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | transexitcode: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:14,520 | INFO     | exeerrorcode: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | exeerrordiag: 
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | exitcode: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | exitmsg: OK
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | cpuconsumptiontime: 33544 s
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | nevents: 150
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | neventsw: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | pid: 2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | pgrp: 2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | corecount: 12
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | event service: False
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | sizes: {0: 2284555, 2: 2284817, 11: 2284845, 3153: 2311162, 3155: 2320170, 3156: 2320226, 3163: 2320660}
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | --------------------------------------------------
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | 
[2026-01-08 20:12:28] 2026-01-08 19:12:14,521 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-08 20:12:28] 2026-01-08 19:12:14,534 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,534 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,534 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | job 6962931408 has completed (purged errors)
[2026-01-08 20:12:28] 2026-01-08 19:12:14,535 | INFO     | overall cleanup function is called
[2026-01-08 20:12:28] 2026-01-08 19:12:15,547 | INFO     | --- collectZombieJob: --- 10, [2948847]
[2026-01-08 20:12:28] 2026-01-08 19:12:15,547 | INFO     | zombie collector waiting for pid 2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:15,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 20:12:28] 2026-01-08 19:12:15,548 | INFO     | collected zombie processes
[2026-01-08 20:12:28] 2026-01-08 19:12:15,548 | INFO     | will attempt to kill all subprocesses of pid=2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:15,612 | INFO     | process IDs to be killed: [2948847] (in reverse order)
[2026-01-08 20:12:28] 2026-01-08 19:12:15,639 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 20:12:28] 2026-01-08 19:12:15,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 20:12:28] 2026-01-08 19:12:15,641 | INFO     | did not find any defunct processes belonging to 2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:15,642 | INFO     | did not find any defunct processes belonging to 2948847
[2026-01-08 20:12:28] 2026-01-08 19:12:15,642 | INFO     | ready for new job
[2026-01-08 20:12:28] 2026-01-08 19:12:15,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 20:12:28] 2026-01-08 19:12:15,643 | INFO     | ***************************************
[2026-01-08 20:12:28] 2026-01-08 19:12:15,643 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 20:12:28] 2026-01-08 19:12:15,643 | INFO     | ***************************************
[2026-01-08 20:12:28] 2026-01-08 19:12:15,643 | INFO     | 
[2026-01-08 20:12:28] 2026-01-08 19:12:15,644 | INFO     | architecture information:
[2026-01-08 20:12:28] 2026-01-08 19:12:15,644 | INFO     | executing command: cat /etc/os-release
[2026-01-08 20:12:28] 2026-01-08 19:12:15,654 | INFO     | cat /etc/os-release:
[2026-01-08 20:12:28] NAME="CentOS Linux"
[2026-01-08 20:12:28] VERSION="7 (Core)"
[2026-01-08 20:12:28] ID="centos"
[2026-01-08 20:12:28] ID_LIKE="rhel fedora"
[2026-01-08 20:12:28] VERSION_ID="7"
[2026-01-08 20:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 20:12:28] ANSI_COLOR="0;31"
[2026-01-08 20:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 20:12:28] HOME_URL="https://www.centos.org/"
[2026-01-08 20:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 20:12:28] 
[2026-01-08 20:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 20:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 20:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 20:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 20:12:28] 
[2026-01-08 20:12:28] 2026-01-08 19:12:15,654 | INFO     | ***************************************
[2026-01-08 20:12:28] 2026-01-08 19:12:16,157 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | INFO     | sufficient remaining disk space (710377734144 B)
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | INFO     | update_server=False
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 20:12:28] 2026-01-08 19:12:16,170 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:12:28] 2026-01-08 19:12:16,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-08 20:12:28] 2026-01-08 19:12:16,171 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 20:12:28] 2026-01-08 19:12:16,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 20:12:28] 2026-01-08 19:12:16,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 20:12:28] 2026-01-08 19:12:16,431 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 20:12:28] 2026-01-08 19:12:16,431 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 20:12:28] 2026-01-08 19:12:16,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 20:12:28] 2026-01-08 19:12:16,431 | INFO     | will abort loop
[2026-01-08 20:12:28] 2026-01-08 19:12:16,433 | INFO     | all job control threads have been joined
[2026-01-08 20:12:28] 2026-01-08 19:12:16,537 | INFO     | all payload control threads have been joined
[2026-01-08 20:12:28] 2026-01-08 19:12:16,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 20:12:28] 2026-01-08 19:12:16,777 | INFO     | all data control threads have been joined
[2026-01-08 20:12:28] 2026-01-08 19:12:17,175 | INFO     | [job] queue monitor thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,176 | INFO     | [job] retrieve thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,285 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,286 | INFO     | [job] validate thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,373 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,436 | INFO     | [job] job monitor thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,439 | INFO     | [job] control thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,481 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,542 | INFO     | [payload] control thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,612 | INFO     | [payload] failed_post thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:17,783 | INFO     | [data] control thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:18,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 20:12:28] 2026-01-08 19:12:18,201 | INFO     | [data] copytool_in thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:18,312 | INFO     | [payload] validate_post thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:18,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:18,566 | INFO     | [data] copytool_out thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:22,046 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 20:12:28] 2026-01-08 19:12:22,765 | INFO     | [monitor] cgroup control has ended
[2026-01-08 20:12:28] 2026-01-08 19:12:23,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961980962624)>', '<ExcThread(monitor, started 139961290446592)>']
[2026-01-08 20:12:28] 2026-01-08 19:12:24,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 20:12:28] 2026-01-08 19:12:24,207 | INFO     | [monitor] control thread has ended
[2026-01-08 20:12:28] 2026-01-08 19:12:28,418 | INFO     | all workflow threads have been joined
[2026-01-08 20:12:28] 2026-01-08 19:12:28,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 20:12:28] 2026-01-08 19:12:28,418 | INFO     | traces error code: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:28,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 20:12:28] 2026-01-08 19:12:28,490 [wrapper] ==== pilot stdout END ====
[2026-01-08 20:12:28] 2026-01-08 19:12:28,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 20:12:28] 2026-01-08 19:12:28,493 [wrapper] pilotpid: 2942078
[2026-01-08 20:12:28] 2026-01-08 19:12:28,495 [wrapper] Pilot exit status: 0
[2026-01-08 20:12:28] 2026-01-08 19:12:28,500 [wrapper] pandaids: 6962931408
[2026-01-08 20:12:28] 2026-01-08 19:12:28,513 [wrapper] cleanup supervisor_pilot 2959011 2942079
[2026-01-08 20:12:28] 2026-01-08 19:12:28,515 [wrapper] Test setup, not cleaning
[2026-01-08 20:12:28] 2026-01-08 19:12:28,516 [wrapper] apfmon messages muted
[2026-01-08 20:12:28] 2026-01-08 19:12:28,517 [wrapper] ==== wrapper stdout END ====
[2026-01-08 20:12:28] 2026-01-08 19:12:28,518 [wrapper] ==== wrapper stderr END ====
[2026-01-08 20:12:28]  *** Error codes and diagnostics ***
[2026-01-08 20:12:28]     "exeErrorCode": 0,
[2026-01-08 20:12:28]     "exeErrorDiag": "",
[2026-01-08 20:12:28]     "pilotErrorCode": 0,
[2026-01-08 20:12:28]     "pilotErrorDiag": "",
[2026-01-08 20:12:28]  *** Listing of results directory ***
[2026-01-08 20:12:28] total 557460
[2026-01-08 20:12:28] -rwx------ 1 boinc boinc     36322 Jan  8 09:21 runpilot2-wrapper.sh
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:27 queuedata.json
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc       100 Jan  8 19:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 20:12:28] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 19:19 run_atlas
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc       105 Jan  8 19:19 job.xml
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc      6726 Jan  8 19:19 init_data.xml
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc 413224344 Jan  8 19:19 EVNT.47961981._000023.pool.root.1
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc     15847 Jan  8 19:19 start_atlas.sh
[2026-01-08 20:12:28] drwxrwx--x 2 boinc boinc      4096 Jan  8 19:19 shared
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc    592607 Jan  8 19:19 input.tar.gz
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc         0 Jan  8 19:19 boinc_lockfile
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc      2875 Jan  8 19:19 pandaJob.out
[2026-01-08 20:12:28] -rw------- 1 boinc boinc    989829 Jan  8 19:19 agis_schedconf.cvmfs.json
[2026-01-08 20:12:28] -rw------- 1 boinc boinc   1516240 Jan  8 19:19 agis_ddmendpoints.agis.ALL.json
[2026-01-08 20:12:28] drwx------ 5 boinc boinc      4096 Jan  8 19:19 pilot3
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc       529 Jan  8 20:07 boinc_task_state.xml
[2026-01-08 20:12:28] -rw------- 1 boinc boinc        95 Jan  8 20:11 pilot_heartbeat.json
[2026-01-08 20:12:28] -rw------- 1 boinc boinc 149501404 Jan  8 20:11 HITS.47961985._000540.pool.root.1
[2026-01-08 20:12:28] -rw------- 1 boinc boinc      1017 Jan  8 20:12 memory_monitor_summary.json
[2026-01-08 20:12:28] -rw------- 1 boinc boinc   1608041 Jan  8 20:12 log.47961985._000540.job.log.tgz.1
[2026-01-08 20:12:28] -rw------- 1 boinc boinc      8577 Jan  8 20:12 heartbeat.json
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc      8192 Jan  8 20:12 boinc_mmap_file
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc        27 Jan  8 20:12 wrapper_checkpoint.txt
[2026-01-08 20:12:28] -rw------- 1 boinc boinc      4746 Jan  8 20:12 pilotlog.txt
[2026-01-08 20:12:28] -rw------- 1 boinc boinc    489718 Jan  8 20:12 log.47961985._000540.job.log.1
[2026-01-08 20:12:28] -rw------- 1 boinc boinc       353 Jan  8 20:12 output.list
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc       620 Jan  8 20:12 runtime_log
[2026-01-08 20:12:28] -rw------- 1 boinc boinc   2119680 Jan  8 20:12 result.tar.gz
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc      9132 Jan  8 20:12 runtime_log.err
[2026-01-08 20:12:28] -rw------- 1 boinc boinc       708 Jan  8 20:12 8jxNDmhR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmk6jKDm8ykaIm.diag
[2026-01-08 20:12:28] -rw-r--r-- 1 boinc boinc     22635 Jan  8 20:12 stderr.txt
[2026-01-08 20:12:28] HITS file was successfully produced:
[2026-01-08 20:12:28] -rw------- 1 boinc boinc 149501404 Jan  8 20:11 shared/HITS.pool.root.1
[2026-01-08 20:12:28]  *** Contents of shared directory: ***
[2026-01-08 20:12:28] total 552212
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc 413224344 Jan  8 19:19 ATLAS.root_0
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc     15847 Jan  8 19:19 start_atlas.sh
[2026-01-08 20:12:28] -rw-r--r-- 2 boinc boinc    592607 Jan  8 19:19 input.tar.gz
[2026-01-08 20:12:28] -rw------- 1 boinc boinc 149501404 Jan  8 20:11 HITS.pool.root.1
[2026-01-08 20:12:28] -rw------- 1 boinc boinc   2119680 Jan  8 20:12 result.tar.gz
20:12:30 (2938254): run_atlas exited; CPU time 33515.773030
20:12:30 (2938254): called boinc_finish(0)

</stderr_txt>
]]>

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