Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:27 (440417): wrapper (7.7.26015): starting
12:29:27 (440417): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:29:27] Arguments: --nthreads 8
[2026-01-08 12:29:27] Threads: 8
[2026-01-08 12:29:27] Checking for CVMFS
[2026-01-08 12:29:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:29:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:29:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:29:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:29:29] 2.13.3.0 6634 21149 189168 154915 0 193 25489617 40960000 15564 16776704 0 22431992 99.704 18523601 47103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 12:29:29] CVMFS is ok
[2026-01-08 12:29:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:29:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:29:29] Further information can be found at the LHC@home message board.
[2026-01-08 12:29:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:29:29] Checking for apptainer binary...
[2026-01-08 12:29:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:29:29] Running /usr/bin/apptainer --version
[2026-01-08 12:29:29] apptainer version 1.4.5-2.el9
[2026-01-08 12:29:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:29:30] c-206-37.aglt2.org
[2026-01-08 12:29:30] apptainer works
[2026-01-08 12:29:30] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:29:30] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:29:30] Starting ATLAS job with PandaID=6962915079
[2026-01-08 12:29:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:37:47]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:37:47] 2026-01-08 21:37:03,858 | INFO     | time since job start (14747s) is within the limit (174528.0s)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,839 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 16:37:47] 2026-01-08 21:37:04,843 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.939359374999
[2026-01-08 16:37:47] 2026-01-08 21:37:04,851 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962915079/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,851 | INFO     | extracted standard info from prmon json
[2026-01-08 16:37:47] 2026-01-08 21:37:04,852 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 16:37:47] 2026-01-08 21:37:04,852 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:37:47] 2026-01-08 21:37:04,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:37:47] 2026-01-08 21:37:04,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:37:47] 2026-01-08 21:37:04,855 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:37:47] 2026-01-08 21:37:04,855 | INFO     | sum of square deviations: 4233263760.9790735
[2026-01-08 16:37:47] 2026-01-08 21:37:04,856 | INFO     | sum of deviations: 152570882007.22183
[2026-01-08 16:37:47] 2026-01-08 21:37:04,856 | INFO     | mean x: 1767900927.129707
[2026-01-08 16:37:47] 2026-01-08 21:37:04,857 | INFO     | mean y: 2395419.0251046023
[2026-01-08 16:37:47] 2026-01-08 21:37:04,857 | INFO     | intersect: -63714447892.24099
[2026-01-08 16:37:47] 2026-01-08 21:37:04,857 | INFO     | chi2: 6.384514302468082
[2026-01-08 16:37:47] 2026-01-08 21:37:04,857 | INFO     | sum of square deviations: 3973081282.9060054
[2026-01-08 16:37:47] 2026-01-08 21:37:04,858 | INFO     | sum of deviations: 164714944806.57263
[2026-01-08 16:37:47] 2026-01-08 21:37:04,858 | INFO     | mean x: 1767900774.6239316
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | mean y: 2402373.7905982905
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | intersect: -73290756708.69553
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | chi2: 5.587604175520009
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | current chi2=5.587604175520009 (change=12.481922495498347 %)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | right removable region: 233
[2026-01-08 16:37:47] 2026-01-08 21:37:04,859 | INFO     | sum of square deviations: 3973091288.393166
[2026-01-08 16:37:47] 2026-01-08 21:37:04,860 | INFO     | sum of deviations: 74377133831.19653
[2026-01-08 16:37:47] 2026-01-08 21:37:04,860 | INFO     | mean x: 1767901079.6324787
[2026-01-08 16:37:47] 2026-01-08 21:37:04,861 | INFO     | mean y: 2441205.816239316
[2026-01-08 16:37:47] 2026-01-08 21:37:04,861 | INFO     | intersect: -33093051863.84355
[2026-01-08 16:37:47] 2026-01-08 21:37:04,861 | INFO     | chi2: 2.085289928842353
[2026-01-08 16:37:47] 2026-01-08 21:37:04,861 | INFO     | current chi2=2.085289928842353 (change=67.33831533533825 %)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,861 | INFO     | sum of square deviations: 3723817136.069871
[2026-01-08 16:37:47] 2026-01-08 21:37:04,862 | INFO     | sum of deviations: 39624353544.62881
[2026-01-08 16:37:47] 2026-01-08 21:37:04,862 | INFO     | mean x: 1767901232.1310043
[2026-01-08 16:37:47] 2026-01-08 21:37:04,863 | INFO     | mean y: 2462360.1790393014
[2026-01-08 16:37:47] 2026-01-08 21:37:04,863 | INFO     | intersect: -18809402157.925858
[2026-01-08 16:37:47] 2026-01-08 21:37:04,863 | INFO     | chi2: 1.205034759581941
[2026-01-08 16:37:47] 2026-01-08 21:37:04,863 | INFO     | current chi2=1.205034759581941 (change=42.21260348910259 %)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,863 | INFO     | sum of square deviations: 3485180255.98216
[2026-01-08 16:37:47] 2026-01-08 21:37:04,864 | INFO     | sum of deviations: 21422598745.955345
[2026-01-08 16:37:47] 2026-01-08 21:37:04,864 | INFO     | mean x: 1767901384.6339285
[2026-01-08 16:37:47] 2026-01-08 21:37:04,864 | INFO     | mean y: 2473983.5848214286
[2026-01-08 16:37:47] 2026-01-08 21:37:04,864 | INFO     | intersect: -10864407842.806824
[2026-01-08 16:37:47] 2026-01-08 21:37:04,865 | INFO     | chi2: 1.0210804359754755
[2026-01-08 16:37:47] 2026-01-08 21:37:04,865 | INFO     | current chi2=1.0210804359754755 (change=15.265478621569745 %)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,865 | INFO     | left removable region: 30
[2026-01-08 16:37:47] 2026-01-08 21:37:04,865 | INFO     | sum of square deviations: 2593966350.1379423
[2026-01-08 16:37:47] 2026-01-08 21:37:04,866 | INFO     | sum of deviations: 11044880743.931036
[2026-01-08 16:37:47] 2026-01-08 21:37:04,866 | INFO     | mean x: 1767901659.137931
[2026-01-08 16:37:47] 2026-01-08 21:37:04,866 | INFO     | mean y: 2500567.78817734
[2026-01-08 16:37:47] 2026-01-08 21:37:04,866 | INFO     | intersect: -7525069321.905224
[2026-01-08 16:37:47] 2026-01-08 21:37:04,866 | INFO     | chi2: 0.04642624355073137
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | current memory leak: 4.26 B/s (using 203 data points, chi2=0.05)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | could have reported an average CPU frequency of 3288 MHz (12 samples)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | ..............................
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . Timing measurements:
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . get job = 0 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . initial setup = 10 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . payload setup = 72 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . stage-in = 0 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . payload execution = 14578 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . stage-out = 2 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | . log creation = 0 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,867 | INFO     | ..............................
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | 
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | job summary report
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | --------------------------------------------------
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | PanDA job id: 6962915079
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | task id: 47898826
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | errors: (none)
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | pilot state: finished 
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | transexitcode: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | exeerrorcode: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | exeerrordiag: 
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | exitcode: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | exitmsg: OK
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | cpuconsumptiontime: 43909 s
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | nevents: 400
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | neventsw: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:04,934 | INFO     | pid: 456301
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | pgrp: 456301
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | corecount: 8
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | event service: False
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 34: 2284108, 42: 2284526, 45: 2284582, 14654: 2315474, 14657: 2324528, 14664: 2324694}
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | --------------------------------------------------
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | 
[2026-01-08 16:37:47] 2026-01-08 21:37:04,935 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | job 6962915079 has completed (purged errors)
[2026-01-08 16:37:47] 2026-01-08 21:37:05,017 | INFO     | overall cleanup function is called
[2026-01-08 16:37:47] 2026-01-08 21:37:06,025 | INFO     | --- collectZombieJob: --- 10, [456301]
[2026-01-08 16:37:47] 2026-01-08 21:37:06,026 | INFO     | zombie collector waiting for pid 456301
[2026-01-08 16:37:47] 2026-01-08 21:37:06,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:37:47] 2026-01-08 21:37:06,026 | INFO     | collected zombie processes
[2026-01-08 16:37:47] 2026-01-08 21:37:06,026 | INFO     | will attempt to kill all subprocesses of pid=456301
[2026-01-08 16:37:47] 2026-01-08 21:37:06,313 | INFO     | process IDs to be killed: [456301] (in reverse order)
[2026-01-08 16:37:47] 2026-01-08 21:37:06,397 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:37:47] 2026-01-08 21:37:06,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:37:47] 2026-01-08 21:37:06,409 | INFO     | did not find any defunct processes belonging to 456301
[2026-01-08 16:37:47] 2026-01-08 21:37:06,417 | INFO     | did not find any defunct processes belonging to 456301
[2026-01-08 16:37:47] 2026-01-08 21:37:06,418 | INFO     | ready for new job
[2026-01-08 16:37:47] 2026-01-08 21:37:06,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:37:47] 2026-01-08 21:37:06,419 | INFO     | ***************************************
[2026-01-08 16:37:47] 2026-01-08 21:37:06,420 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:37:47] 2026-01-08 21:37:06,420 | INFO     | ***************************************
[2026-01-08 16:37:47] 2026-01-08 21:37:06,420 | INFO     | 
[2026-01-08 16:37:47] 2026-01-08 21:37:06,423 | INFO     | architecture information:
[2026-01-08 16:37:47] 2026-01-08 21:37:06,423 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:37:47] 2026-01-08 21:37:06,444 | INFO     | cat /etc/os-release:
[2026-01-08 16:37:47] NAME="CentOS Linux"
[2026-01-08 16:37:47] VERSION="7 (Core)"
[2026-01-08 16:37:47] ID="centos"
[2026-01-08 16:37:47] ID_LIKE="rhel fedora"
[2026-01-08 16:37:47] VERSION_ID="7"
[2026-01-08 16:37:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:37:47] ANSI_COLOR="0;31"
[2026-01-08 16:37:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:37:47] HOME_URL="https://www.centos.org/"
[2026-01-08 16:37:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:37:47] 
[2026-01-08 16:37:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:37:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:37:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:37:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:37:47] 
[2026-01-08 16:37:47] 2026-01-08 21:37:06,444 | INFO     | ***************************************
[2026-01-08 16:37:47] 2026-01-08 21:37:06,948 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 16:37:47] 2026-01-08 21:37:07,083 | INFO     | sufficient remaining disk space (84841332736 B)
[2026-01-08 16:37:47] 2026-01-08 21:37:07,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:37:47] 2026-01-08 21:37:07,083 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:37:47] 2026-01-08 21:37:07,083 | INFO     | update_server=False
[2026-01-08 16:37:47] 2026-01-08 21:37:07,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:37:47] 2026-01-08 21:37:07,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:37:47] 2026-01-08 21:37:07,084 | INFO     | aborting loop
[2026-01-08 16:37:47] 2026-01-08 21:37:07,235 | INFO     | all job control threads have been joined
[2026-01-08 16:37:47] 2026-01-08 21:37:07,268 | INFO     | all data control threads have been joined
[2026-01-08 16:37:47] 2026-01-08 21:37:07,377 | INFO     | all payload control threads have been joined
[2026-01-08 16:37:47] 2026-01-08 21:37:07,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:37:47] 2026-01-08 21:37:08,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:37:47] 2026-01-08 21:37:08,090 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,097 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,107 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,130 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,239 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,241 | INFO     | [job] control thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,274 | INFO     | [data] control thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,395 | INFO     | [payload] control thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,429 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,806 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:08,903 | INFO     | [job] validate thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:09,080 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:09,932 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:09,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:37:47] 2026-01-08 21:37:10,964 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:12,047 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:17,549 | INFO     | job.realtimelogging is not enabled
[2026-01-08 16:37:47] 2026-01-08 21:37:18,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:37:47] 2026-01-08 21:37:37,599 | INFO     | PID=448516 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 16:37:47] 2026-01-08 21:37:37,605 | INFO     | .. there are 12 such processes running
[2026-01-08 16:37:47] 2026-01-08 21:37:37,605 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:37:47] 2026-01-08 21:37:37,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:37:47] 2026-01-08 21:37:37,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:37:47] 2026-01-08 21:37:40,210 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:37:47] 2026-01-08 21:37:41,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827788228416)>', '<ExcThread(monitor, started 139827408262912)>']
[2026-01-08 16:37:47] 2026-01-08 21:37:42,655 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:37:47] 2026-01-08 21:37:42,656 | INFO     | [monitor] control thread has ended
[2026-01-08 16:37:47] 2026-01-08 21:37:46,790 | INFO     | all workflow threads have been joined
[2026-01-08 16:37:47] 2026-01-08 21:37:46,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:37:47] 2026-01-08 21:37:46,790 | INFO     | traces error code: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:46,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:37:47] 2026-01-08 21:37:46,927 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:37:47] 2026-01-08 21:37:46,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:37:47] 2026-01-08 21:37:46,958 [wrapper] pilotpid: 448516
[2026-01-08 16:37:47] 2026-01-08 21:37:46,967 [wrapper] Pilot exit status: 0
[2026-01-08 16:37:47] 2026-01-08 21:37:47,026 [wrapper] pandaids: 6962915079
[2026-01-08 16:37:47] 2026-01-08 21:37:47,096 [wrapper] cleanup supervisor_pilot  899299 448517
[2026-01-08 16:37:47] 2026-01-08 21:37:47,101 [wrapper] Test setup, not cleaning
[2026-01-08 16:37:47] 2026-01-08 21:37:47,111 [wrapper] apfmon messages muted
[2026-01-08 16:37:47] 2026-01-08 21:37:47,140 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:37:47] 2026-01-08 21:37:47,193 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:37:47]  *** Error codes and diagnostics ***
[2026-01-08 16:37:47]     "exeErrorCode": 0,
[2026-01-08 16:37:47]     "exeErrorDiag": "",
[2026-01-08 16:37:47]     "pilotErrorCode": 0,
[2026-01-08 16:37:47]     "pilotErrorDiag": "",
[2026-01-08 16:37:47]  *** Listing of results directory ***
[2026-01-08 16:37:47] total 433968
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-08 16:37:47] -rwx------. 1 boincer umatlas     36322 Jan  8 03:01 runpilot2-wrapper.sh
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:01 queuedata.json
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas       100 Jan  8 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:37:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 12:29 run_atlas
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas       105 Jan  8 12:29 job.xml
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas 222336602 Jan  8 12:29 EVNT.47898824._000394.pool.root.1
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:29 start_atlas.sh
[2026-01-08 16:37:47] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 12:29 shared
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 12:29 input.tar.gz
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas         0 Jan  8 12:29 boinc_lockfile
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 12:29 pandaJob.out
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas        57 Jan  8 12:29 setup.sh.local
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas    989837 Jan  8 12:31 agis_schedconf.cvmfs.json
[2026-01-08 16:37:47] drwx------. 5 boincer umatlas      4096 Jan  8 12:31 pilot3
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas 213106181 Jan  8 16:36 HITS.47898826._018044.pool.root.1
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas       530 Jan  8 16:36 boinc_task_state.xml
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas      1028 Jan  8 16:36 memory_monitor_summary.json
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas        95 Jan  8 16:36 pilot_heartbeat.json
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas   1516240 Jan  8 16:36 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas    480642 Jan  8 16:36 log.47898826._018044.job.log.tgz.1
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas      7775 Jan  8 16:37 heartbeat.json
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas      6906 Jan  8 16:37 init_data.xml
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas        28 Jan  8 16:37 wrapper_checkpoint.txt
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 16:37 boinc_mmap_file
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas      4895 Jan  8 16:37 pilotlog.txt
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas   2033543 Jan  8 16:37 log.47898826._018044.job.log.1
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas       357 Jan  8 16:37 output.list
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas       620 Jan  8 16:37 runtime_log
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas   2529280 Jan  8 16:37 result.tar.gz
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 16:37 runtime_log.err
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas       655 Jan  8 16:37 iEgNDmU8zx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1RjKDmcYVrQn.diag
[2026-01-08 16:37:47] -rw-r--r--. 1 boincer umatlas     21177 Jan  8 16:37 stderr.txt
[2026-01-08 16:37:47] HITS file was successfully produced:
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas 213106181 Jan  8 16:36 shared/HITS.pool.root.1
[2026-01-08 16:37:47]  *** Contents of shared directory: ***
[2026-01-08 16:37:47] total 428312
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas 222336602 Jan  8 12:29 ATLAS.root_0
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:29 start_atlas.sh
[2026-01-08 16:37:47] -rw-r--r--. 2 boincer umatlas    592397 Jan  8 12:29 input.tar.gz
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas 213106181 Jan  8 16:36 HITS.pool.root.1
[2026-01-08 16:37:47] -rw-------. 1 boincer umatlas   2529280 Jan  8 16:37 result.tar.gz
16:37:49 (440417): run_atlas exited; CPU time 44173.729112
16:37:49 (440417): called boinc_finish(0)

</stderr_txt>
]]>

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