Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:05:05 (108918): wrapper (7.7.26015): starting
09:05:05 (108918): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 09:05:05] Arguments: --nthreads 4
[2026-01-08 09:05:05] Threads: 4
[2026-01-08 09:05:05] Checking for CVMFS
[2026-01-08 09:05:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 09:05:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 09:05:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 09:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 09:05:06] 2.13.3.0 9561 2 63000 154914 1 252 2638096 6144000 3780 130560 0 257548 99.993 2910 947 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 09:05:06] CVMFS is ok
[2026-01-08 09:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 09:05:06] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 09:05:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 09:05:06] Further information can be found at the LHC@home message board.
[2026-01-08 09:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 09:05:06] Checking for apptainer binary...
[2026-01-08 09:05:06] apptainer is not installed, using version from CVMFS
[2026-01-08 09:05:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 09:05:06] p8
[2026-01-08 09:05:06] apptainer works
[2026-01-08 09:05:06] Set ATHENA_PROC_NUMBER=4
[2026-01-08 09:05:06] Set ATHENA_CORE_NUMBER=4
[2026-01-08 09:05:06] Starting ATLAS job with PandaID=6962915458
[2026-01-08 09:05:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/data/boinc-0/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:03:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:03:29] 2026-01-08 19:02:37,364 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:03:29] 2026-01-08 19:02:37,364 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:03:29] 2026-01-08 19:02:37,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:03:29] 2026-01-08 19:02:37,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | sum of square deviations: 483971865.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | sum of deviations: 2870008763.999998
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | mean x: 1767895433.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | mean y: 2299161.672413793
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | intersect: -10481523876.223759
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | chi2: 1.8682920116743171
[2026-01-08 11:03:29] 2026-01-08 19:02:37,366 | INFO     | sum of square deviations: 424045160.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | sum of deviations: 9800491129.000002
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | mean x: 1767895281.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | mean y: 2316152.108108108
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | intersect: -40857110278.89152
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | chi2: 1.0587863227234082
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | current chi2=1.0587863227234082 (change=43.32864904910929 %)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | sum of square deviations: 369281342.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | sum of deviations: 9338001878.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | mean x: 1767895128.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | mean y: 2314863.547169811
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | intersect: -44702375382.318825
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | chi2: 1.0604397218626944
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | current chi2=1.0604397218626944 (change=-0.15615985055731768 %)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,367 | INFO     | right removable region: 105
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | sum of square deviations: 424045160.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | sum of deviations: -6143455058.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | mean x: 1767895586.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | mean y: 2321310.900900901
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | intersect: 25615128870.896572
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | chi2: 0.8404251136935207
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | current chi2=0.8404251136935207 (change=55.01639420165627 %)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | sum of square deviations: 369281342.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | sum of deviations: -5558979623.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,368 | INFO     | mean x: 1767895738.5
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | mean y: 2319690.896226415
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | intersect: 26615352237.467365
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | chi2: 0.8408277808232548
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | current chi2=0.8408277808232548 (change=-0.047912315228716126 %)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | left removable region: 20
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | sum of square deviations: 190403570.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | sum of deviations: 699077995.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | mean x: 1767895708.0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | mean y: 2340557.894117647
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | intersect: -6488593340.654872
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | chi2: 0.0003982432006345514
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | current memory leak: 3.67 B/s (using 85 data points, chi2=0.00)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | could have reported an average CPU frequency of 4156 MHz (7 samples)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,369 | INFO     | ..............................
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . Timing measurements:
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . get job = 0 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . initial setup = 2 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . payload setup = 1 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . stage-in = 0 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . payload execution = 7025 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . stage-out = 0 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | . log creation = 0 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,370 | INFO     | ..............................
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | 
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | job summary report
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | --------------------------------------------------
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | PanDA job id: 6962915458
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | task id: 47898826
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | errors: (none)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | pilot state: finished 
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | transexitcode: 0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | exeerrorcode: 0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | exeerrordiag: 
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | exitcode: 0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | exitmsg: OK
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | cpuconsumptiontime: 27334 s
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | nevents: 400
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | neventsw: 0
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | pid: 143141
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | pgrp: 143141
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | corecount: 4
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | event service: False
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | sizes: {0: 2283969, 2: 2284231, 11: 2284259, 7031: 2320615, 7033: 2320615, 7034: 2320809}
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | --------------------------------------------------
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | 
[2026-01-08 11:03:29] 2026-01-08 19:02:37,415 | INFO     | executing command: ls -lF /mnt/data/boinc-0/slots/7
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:03:29] 2026-01-08 19:02:37,425 | INFO     | job 6962915458 has completed (purged errors)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,426 | INFO     | overall cleanup function is called
[2026-01-08 11:03:29] 2026-01-08 19:02:37,476 | WARNING  | process 143141 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 11:03:29] 2026-01-08 19:02:37,561 | INFO     | using path: /mnt/data/boinc-0/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:03:29] 2026-01-08 19:02:37,682 | INFO     | number of running child processes to parent process 143141: 1
[2026-01-08 11:03:29] 2026-01-08 19:02:37,682 | INFO     | maximum number of monitored processes: 6
[2026-01-08 11:03:29] 2026-01-08 19:02:37,682 | INFO     | aborting job monitoring since job object (job id=6962915458) has expired
[2026-01-08 11:03:29] 2026-01-08 19:02:38,432 | INFO     | --- collectZombieJob: --- 10, [143141]
[2026-01-08 11:03:29] 2026-01-08 19:02:38,432 | INFO     | zombie collector waiting for pid 143141
[2026-01-08 11:03:29] 2026-01-08 19:02:38,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:03:29] 2026-01-08 19:02:38,432 | INFO     | collected zombie processes
[2026-01-08 11:03:29] 2026-01-08 19:02:38,432 | INFO     | will attempt to kill all subprocesses of pid=143141
[2026-01-08 11:03:29] 2026-01-08 19:02:38,558 | INFO     | process IDs to be killed: [143141] (in reverse order)
[2026-01-08 11:03:29] 2026-01-08 19:02:38,607 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:03:29] 2026-01-08 19:02:38,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:03:29] 2026-01-08 19:02:38,612 | INFO     | did not find any defunct processes belonging to 143141
[2026-01-08 11:03:29] 2026-01-08 19:02:38,615 | INFO     | did not find any defunct processes belonging to 143141
[2026-01-08 11:03:29] 2026-01-08 19:02:38,615 | INFO     | ready for new job
[2026-01-08 11:03:29] 2026-01-08 19:02:38,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:03:29] 2026-01-08 19:02:38,616 | INFO     | ***************************************
[2026-01-08 11:03:29] 2026-01-08 19:02:38,616 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:03:29] 2026-01-08 19:02:38,616 | INFO     | ***************************************
[2026-01-08 11:03:29] 2026-01-08 19:02:38,616 | INFO     | 
[2026-01-08 11:03:29] 2026-01-08 19:02:38,617 | INFO     | architecture information:
[2026-01-08 11:03:29] 2026-01-08 19:02:38,617 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:03:29] 2026-01-08 19:02:38,625 | INFO     | cat /etc/os-release:
[2026-01-08 11:03:29] NAME="CentOS Linux"
[2026-01-08 11:03:29] VERSION="7 (Core)"
[2026-01-08 11:03:29] ID="centos"
[2026-01-08 11:03:29] ID_LIKE="rhel fedora"
[2026-01-08 11:03:29] VERSION_ID="7"
[2026-01-08 11:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:03:29] ANSI_COLOR="0;31"
[2026-01-08 11:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:03:29] HOME_URL="https://www.centos.org/"
[2026-01-08 11:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:03:29] 
[2026-01-08 11:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:03:29] 
[2026-01-08 11:03:29] 2026-01-08 19:02:38,625 | INFO     | ***************************************
[2026-01-08 11:03:29] 2026-01-08 19:02:39,128 | INFO     | executing command: df -mP /mnt/data/boinc-0/slots/7
[2026-01-08 11:03:29] 2026-01-08 19:02:39,136 | INFO     | sufficient remaining disk space (338439438336 B)
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | INFO     | update_server=False
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:03:29] 2026-01-08 19:02:39,137 | INFO     | aborting loop
[2026-01-08 11:03:29] 2026-01-08 19:02:39,203 | INFO     | all payload control threads have been joined
[2026-01-08 11:03:29] 2026-01-08 19:02:39,347 | INFO     | all data control threads have been joined
[2026-01-08 11:03:29] 2026-01-08 19:02:40,036 | INFO     | job.realtimelogging is not enabled
[2026-01-08 11:03:29] 2026-01-08 19:02:40,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:03:29] 2026-01-08 19:02:40,142 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,142 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,142 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,182 | INFO     | all job control threads have been joined
[2026-01-08 11:03:29] 2026-01-08 19:02:40,207 | INFO     | [payload] control thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,352 | INFO     | [data] control thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,721 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,746 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,840 | INFO     | [job] validate thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,846 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:40,943 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:41,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:41,069 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:41,186 | INFO     | [job] control thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:41,576 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:41,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:03:29] 2026-01-08 19:02:42,077 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:02:45,752 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:03:29] 2026-01-08 19:03:09,785 | INFO     | PID=120767 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 11:03:29] 2026-01-08 19:03:09,785 | INFO     | .. there are 16 such processes running
[2026-01-08 11:03:29] 2026-01-08 19:03:09,785 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:03:29] 2026-01-08 19:03:09,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:03:29] 2026-01-08 19:03:09,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:03:29] 2026-01-08 19:03:22,564 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:03:29] 2026-01-08 19:03:23,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127733031266112)>', '<ExcThread(monitor, started 127732058945280)>']
[2026-01-08 11:03:29] 2026-01-08 19:03:24,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:03:29] 2026-01-08 19:03:24,851 | INFO     | [monitor] control thread has ended
[2026-01-08 11:03:29] 2026-01-08 19:03:28,992 | INFO     | all workflow threads have been joined
[2026-01-08 11:03:29] 2026-01-08 19:03:28,992 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:03:29] 2026-01-08 19:03:28,992 | INFO     | traces error code: 0
[2026-01-08 11:03:29] 2026-01-08 19:03:28,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:03:29] 2026-01-08 19:03:29,052 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:03:29] 2026-01-08 19:03:29,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:03:29] 2026-01-08 19:03:29,055 [wrapper] pilotpid: 120767
[2026-01-08 11:03:29] 2026-01-08 19:03:29,056 [wrapper] Pilot exit status: 0
[2026-01-08 11:03:29] 2026-01-08 19:03:29,061 [wrapper] pandaids: 6962915458
[2026-01-08 11:03:29] 2026-01-08 19:03:29,092 [wrapper] cleanup supervisor_pilot  527634 120768
[2026-01-08 11:03:29] 2026-01-08 19:03:29,094 [wrapper] Test setup, not cleaning
[2026-01-08 11:03:29] 2026-01-08 19:03:29,095 [wrapper] apfmon messages muted
[2026-01-08 11:03:29] 2026-01-08 19:03:29,096 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:03:29] 2026-01-08 19:03:29,097 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:03:29]  *** Error codes and diagnostics ***
[2026-01-08 11:03:29]     "exeErrorCode": 0,
[2026-01-08 11:03:29]     "exeErrorDiag": "",
[2026-01-08 11:03:29]     "pilotErrorCode": 0,
[2026-01-08 11:03:29]     "pilotErrorDiag": "",
[2026-01-08 11:03:29]  *** Listing of results directory ***
[2026-01-08 11:03:29] total 444192
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc    579449 Jan  7 23:56 pilot3.tar.gz
[2026-01-08 11:03:29] -rwx------ 1 boinc boinc     36322 Jan  8 00:01 runpilot2-wrapper.sh
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc      5112 Jan  8 00:03 queuedata.json
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc       100 Jan  8 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:03:29] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 09:05 run_atlas
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc       105 Jan  8 09:05 job.xml
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc 226108183 Jan  8 09:05 EVNT.47898824._000401.pool.root.1
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc    592391 Jan  8 09:05 input.tar.gz
[2026-01-08 11:03:29] drwxrwx--x 2 boinc boinc      4096 Jan  8 09:05 shared
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc     15847 Jan  8 09:05 start_atlas.sh
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc         0 Jan  8 09:05 boinc_setup_complete
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc     10138 Jan  8 09:05 init_data.xml
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc         0 Jan  8 09:05 boinc_lockfile
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc      2517 Jan  8 09:05 pandaJob.out
[2026-01-08 11:03:29] -rw------- 1 boinc boinc    989837 Jan  8 09:05 agis_schedconf.cvmfs.json
[2026-01-08 11:03:29] -rw------- 1 boinc boinc   1516240 Jan  8 09:05 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:03:29] drwx------ 5 boinc boinc      4096 Jan  8 09:05 pilot3
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc       529 Jan  8 11:02 boinc_task_state.xml
[2026-01-08 11:03:29] -rw------- 1 boinc boinc 222222210 Jan  8 11:02 HITS.47898826._018200.pool.root.1
[2026-01-08 11:03:29] -rw------- 1 boinc boinc      1034 Jan  8 11:02 memory_monitor_summary.json
[2026-01-08 11:03:29] -rw------- 1 boinc boinc    284638 Jan  8 11:02 log.47898826._018200.job.log.tgz.1
[2026-01-08 11:03:29] -rw------- 1 boinc boinc      7762 Jan  8 11:02 heartbeat.json
[2026-01-08 11:03:29] -rw------- 1 boinc boinc        95 Jan  8 11:02 pilot_heartbeat.json
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc      8192 Jan  8 11:03 boinc_mmap_file
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc        27 Jan  8 11:03 wrapper_checkpoint.txt
[2026-01-08 11:03:29] -rw------- 1 boinc boinc      4899 Jan  8 11:03 pilotlog.txt
[2026-01-08 11:03:29] -rw------- 1 boinc boinc   1019531 Jan  8 11:03 log.47898826._018200.job.log.1
[2026-01-08 11:03:29] -rw------- 1 boinc boinc       357 Jan  8 11:03 output.list
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc       620 Jan  8 11:03 runtime_log
[2026-01-08 11:03:29] -rw------- 1 boinc boinc   1320960 Jan  8 11:03 result.tar.gz
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc      8824 Jan  8 11:03 runtime_log.err
[2026-01-08 11:03:29] -rw------- 1 boinc boinc       644 Jan  8 11:03 oAwLDmv8zx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuKeKDmTX0Gtm.diag
[2026-01-08 11:03:29] -rw-r--r-- 1 boinc boinc     21104 Jan  8 11:03 stderr.txt
[2026-01-08 11:03:29] HITS file was successfully produced:
[2026-01-08 11:03:29] -rw------- 1 boinc boinc 222222210 Jan  8 11:02 shared/HITS.pool.root.1
[2026-01-08 11:03:29]  *** Contents of shared directory: ***
[2026-01-08 11:03:29] total 439720
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc 226108183 Jan  8 09:05 ATLAS.root_0
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc    592391 Jan  8 09:05 input.tar.gz
[2026-01-08 11:03:29] -rw-r--r-- 2 boinc boinc     15847 Jan  8 09:05 start_atlas.sh
[2026-01-08 11:03:29] -rw------- 1 boinc boinc 222222210 Jan  8 11:02 HITS.pool.root.1
[2026-01-08 11:03:29] -rw------- 1 boinc boinc   1320960 Jan  8 11:03 result.tar.gz
11:03:30 (108918): run_atlas exited; CPU time 27447.862358
11:03:30 (108918): called boinc_finish(0)

</stderr_txt>
]]>

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