Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:20:05 (2201695): wrapper (7.7.26015): starting
12:20:05 (2201695): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 12:20:05] Arguments: --nthreads 12
[2026-01-08 12:20:05] Threads: 12
[2026-01-08 12:20:05] Checking for CVMFS
[2026-01-08 12:20:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:20:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:20:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:20:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:20:11] 2.8.1.0 2201950 0 30188 154915 3 1 3954865 4096001 0 130560 0 0 0.000 1336 1199 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 12:20:11] CVMFS is ok
[2026-01-08 12:20:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:20:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:20:11] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 12:20:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 12:20:11] Further information can be found at the LHC@home message board.
[2026-01-08 12:20:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:20:11] Checking for apptainer binary...
[2026-01-08 12:20:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-08 12:20:11] apptainer is not installed, using version from CVMFS
[2026-01-08 12:20:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:20:12] farmville.blisteringsheep.pec
[2026-01-08 12:20:12] apptainer works
[2026-01-08 12:20:12] Set ATHENA_PROC_NUMBER=12
[2026-01-08 12:20:12] Set ATHENA_CORE_NUMBER=12
[2026-01-08 12:20:12] Starting ATLAS job with PandaID=6962931502
[2026-01-08 12:20:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 13:21:39]  *** The last 200 lines of the pilot log: ***
[2026-01-08 13:21:39] ]
[2026-01-08 13:21:39] 2026-01-08 18:20:28,089 | INFO     | transferring file log.47961985._000634.job.log.tgz.1 from /var/lib/boinc/slots/16/PanDA_Pilot-6962931502/log.47961985._000634.job.log.tgz.1 to /var/lib/boinc/slots
[2026-01-08 13:21:39] 2026-01-08 18:20:28,089 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/16/PanDA_Pilot-6962931502/log.47961985._000634.job.log.tgz.1 /var/lib/boinc/slots/16/log.47961985._000634.j
[2026-01-08 13:21:39] 2026-01-08 18:20:28,102 | INFO     | adding to output.list: log.47961985._000634.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/7f/06/log.47961985._000634.job.log.tgz.
[2026-01-08 13:21:39] 2026-01-08 18:20:28,103 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 13:21:39] 2026-01-08 18:20:28,103 | INFO     | summary of transferred files:
[2026-01-08 13:21:39] 2026-01-08 18:20:28,103 | INFO     |  -- lfn=log.47961985._000634.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 13:21:39] 2026-01-08 18:20:28,103 | INFO     | stage-out finished correctly
[2026-01-08 13:21:39] 2026-01-08 18:20:28,295 | WARNING  | process 2213721 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 13:21:39] 2026-01-08 18:20:28,295 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6962931502/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:21:39] 2026-01-08 18:20:28,425 | INFO     | number of running child processes to parent process 2213721: 1
[2026-01-08 13:21:39] 2026-01-08 18:20:28,425 | INFO     | maximum number of monitored processes: 17
[2026-01-08 13:21:39] 2026-01-08 18:20:29,754 | INFO     | time since job start (3602s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:30,928 | INFO     | monitor loop #272: job 0:6962931502 is in state 'finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:30,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:21:39] 2026-01-08 18:20:31,464 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 13:21:39] 2026-01-08 18:20:31,759 | INFO     | time since job start (3604s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:33,431 | INFO     | monitor loop #273: job 0:6962931502 is in state 'finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:33,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:21:39] 2026-01-08 18:20:33,764 | INFO     | time since job start (3606s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:34,220 | INFO     | job 6962931502 has state=finished
[2026-01-08 13:21:39] 2026-01-08 18:20:34,220 | INFO     | preparing for final server update for job 6962931502 in state='finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | this job has now completed (state=finished)
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | log transfer has been attempted: DONE
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | job 6962931502 has finished - writing final server update
[2026-01-08 13:21:39] 2026-01-08 18:20:34,552 | INFO     | total number of processed events: 150 (read)
[2026-01-08 13:21:39] 2026-01-08 18:20:34,553 | INFO     | executing command: lscpu
[2026-01-08 13:21:39] 2026-01-08 18:20:34,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 13:21:39] 2026-01-08 18:20:35,769 | INFO     | time since job start (3608s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:35,934 | INFO     | monitor loop #274: job 0:6962931502 is in state 'finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:35,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:21:39] 2026-01-08 18:20:37,774 | INFO     | time since job start (3610s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:38,437 | INFO     | monitor loop #275: job 0:6962931502 is in state 'finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:38,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:21:39] 2026-01-08 18:20:39,780 | INFO     | time since job start (3612s) is within the limit (174528.0s)
[2026-01-08 13:21:39] 2026-01-08 18:20:40,937 | INFO     | monitor loop #276: job 0:6962931502 is in state 'finished'
[2026-01-08 13:21:39] 2026-01-08 18:20:40,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,035 | INFO     | PID=2206445 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:21:39] 2026-01-08 18:20:41,344 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 13:21:39] 2026-01-08 18:20:41,347 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2699.9983541666666
[2026-01-08 13:21:39] 2026-01-08 18:20:41,351 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6962931502/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,351 | INFO     | extracted standard info from prmon json
[2026-01-08 13:21:39] 2026-01-08 18:20:41,351 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 13:21:39] 2026-01-08 18:20:41,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 13:21:39] 2026-01-08 18:20:41,352 | INFO     | fitting pss+swap vs Time
[2026-01-08 13:21:39] 2026-01-08 18:20:41,352 | INFO     | sum of square deviations: 43587554.51923078
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | sum of deviations: 2289570959.2884617
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | mean x: 1767894707.5961537
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | mean y: 3278993.4423076925
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | intersect: -92860852207.26706
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | chi2: 0.21924694159180813
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | current memory leak: 52.53 B/s (using 52 data points, chi2=0.22)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | could have reported an average CPU frequency of 2826 MHz (5 samples)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | ..............................
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | . Timing measurements:
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | . get job = 0 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | . initial setup = 2 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,353 | INFO     | . payload setup = 3 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,354 | INFO     | . stage-in = 0 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,354 | INFO     | . payload execution = 3579 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,354 | INFO     | . stage-out = 0 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,354 | INFO     | . log creation = 0 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,354 | INFO     | ..............................
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | 
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | job summary report
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | --------------------------------------------------
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | PanDA job id: 6962931502
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | task id: 47961985
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | errors: (none)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 13:21:39] 2026-01-08 18:20:41,730 | INFO     | pilot state: finished 
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | transexitcode: 0
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | exeerrorcode: 0
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | exeerrordiag: 
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | exitcode: 0
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | exitmsg: OK
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | cpuconsumptiontime: 38472 s
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | nevents: 150
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | neventsw: 0
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | pid: 2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | pgrp: 2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | corecount: 12
[2026-01-08 13:21:39] 2026-01-08 18:20:41,731 | INFO     | event service: False
[2026-01-08 13:21:39] 2026-01-08 18:20:41,732 | INFO     | sizes: {0: 2284435, 1: 2284577, 3: 2284839, 11: 2284867, 3586: 2311396, 3587: 2320392, 3590: 2320576, 3600: 2320854}
[2026-01-08 13:21:39] 2026-01-08 18:20:41,732 | INFO     | --------------------------------------------------
[2026-01-08 13:21:39] 2026-01-08 18:20:41,732 | INFO     | 
[2026-01-08 13:21:39] 2026-01-08 18:20:41,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-08 13:21:39] 2026-01-08 18:20:41,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,745 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,745 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,745 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | job 6962931502 has completed (purged errors)
[2026-01-08 13:21:39] 2026-01-08 18:20:41,747 | INFO     | overall cleanup function is called
[2026-01-08 13:21:39] 2026-01-08 18:20:42,763 | INFO     | --- collectZombieJob: --- 10, [2213721]
[2026-01-08 13:21:39] 2026-01-08 18:20:42,763 | INFO     | zombie collector waiting for pid 2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:42,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 13:21:39] 2026-01-08 18:20:42,763 | INFO     | collected zombie processes
[2026-01-08 13:21:39] 2026-01-08 18:20:42,763 | INFO     | will attempt to kill all subprocesses of pid=2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:42,917 | INFO     | process IDs to be killed: [2213721] (in reverse order)
[2026-01-08 13:21:39] 2026-01-08 18:20:42,959 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 13:21:39] 2026-01-08 18:20:42,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 13:21:39] 2026-01-08 18:20:42,962 | INFO     | did not find any defunct processes belonging to 2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:42,965 | INFO     | did not find any defunct processes belonging to 2213721
[2026-01-08 13:21:39] 2026-01-08 18:20:42,965 | INFO     | ready for new job
[2026-01-08 13:21:39] 2026-01-08 18:20:42,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 13:21:39] 2026-01-08 18:20:42,966 | INFO     | ***************************************
[2026-01-08 13:21:39] 2026-01-08 18:20:42,966 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 13:21:39] 2026-01-08 18:20:42,966 | INFO     | ***************************************
[2026-01-08 13:21:39] 2026-01-08 18:20:42,966 | INFO     | 
[2026-01-08 13:21:39] 2026-01-08 18:20:42,968 | INFO     | architecture information:
[2026-01-08 13:21:39] 2026-01-08 18:20:42,968 | INFO     | executing command: cat /etc/os-release
[2026-01-08 13:21:39] 2026-01-08 18:20:42,975 | INFO     | cat /etc/os-release:
[2026-01-08 13:21:39] NAME="CentOS Linux"
[2026-01-08 13:21:39] VERSION="7 (Core)"
[2026-01-08 13:21:39] ID="centos"
[2026-01-08 13:21:39] ID_LIKE="rhel fedora"
[2026-01-08 13:21:39] VERSION_ID="7"
[2026-01-08 13:21:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 13:21:39] ANSI_COLOR="0;31"
[2026-01-08 13:21:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 13:21:39] HOME_URL="https://www.centos.org/"
[2026-01-08 13:21:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 13:21:39] 
[2026-01-08 13:21:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 13:21:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 13:21:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 13:21:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 13:21:39] 
[2026-01-08 13:21:39] 2026-01-08 18:20:42,975 | INFO     | ***************************************
[2026-01-08 13:21:39] 2026-01-08 18:20:43,478 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-08 13:21:39] 2026-01-08 18:20:43,487 | INFO     | sufficient remaining disk space (384032571392 B)
[2026-01-08 13:21:39] 2026-01-08 18:20:43,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 13:21:39] 2026-01-08 18:20:43,487 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 13:21:39] 2026-01-08 18:20:43,487 | INFO     | update_server=False
[2026-01-08 13:21:39] 2026-01-08 18:20:43,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 13:21:39] 2026-01-08 18:20:43,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 13:21:39] 2026-01-08 18:20:43,674 | INFO     | all data control threads have been joined
[2026-01-08 13:21:39] 2026-01-08 18:20:43,845 | INFO     | all payload control threads have been joined
[2026-01-08 13:21:39] 2026-01-08 18:20:44,088 | INFO     | all job control threads have been joined
[2026-01-08 13:21:39] 2026-01-08 18:20:44,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:21:39] 2026-01-08 18:20:44,446 | INFO     | aborting loop
[2026-01-08 13:21:39] 2026-01-08 18:20:44,492 | INFO     | [job] retrieve thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:44,679 | INFO     | [data] control thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:44,685 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:44,850 | INFO     | [payload] control thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:44,894 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,093 | INFO     | [job] control thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,451 | INFO     | [job] job monitor thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,577 | INFO     | [data] copytool_in thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,587 | INFO     | [payload] failed_post thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,670 | INFO     | [data] copytool_out thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,760 | INFO     | [job] validate thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:45,989 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:46,094 | INFO     | [payload] validate_post thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:46,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 13:21:39] 2026-01-08 18:20:46,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 13:21:39] 2026-01-08 18:20:47,420 | INFO     | [job] queue monitor thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:50,562 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:20:54,504 | INFO     | job.realtimelogging is not enabled
[2026-01-08 13:21:39] 2026-01-08 18:20:55,509 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 13:21:39] 2026-01-08 18:21:13,285 | INFO     | PID=2206445 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 13:21:39] 2026-01-08 18:21:13,286 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 13:21:39] 2026-01-08 18:21:13,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 13:21:39] 2026-01-08 18:21:13,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 13:21:39] 2026-01-08 18:21:32,459 | INFO     | [monitor] cgroup control has ended
[2026-01-08 13:21:39] 2026-01-08 18:21:33,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638678017856)>', '<ExcThread(monitor, started 140638125270784)>']
[2026-01-08 13:21:39] 2026-01-08 18:21:34,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 13:21:39] 2026-01-08 18:21:34,388 | INFO     | [monitor] control thread has ended
[2026-01-08 13:21:39] 2026-01-08 18:21:38,967 | INFO     | all workflow threads have been joined
[2026-01-08 13:21:39] 2026-01-08 18:21:38,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 13:21:39] 2026-01-08 18:21:38,968 | INFO     | traces error code: 0
[2026-01-08 13:21:39] 2026-01-08 18:21:38,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 13:21:39] 2026-01-08 18:21:39,058 [wrapper] ==== pilot stdout END ====
[2026-01-08 13:21:39] 2026-01-08 18:21:39,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 13:21:39] 2026-01-08 18:21:39,061 [wrapper] pilotpid: 2206445
[2026-01-08 13:21:39] 2026-01-08 18:21:39,062 [wrapper] Pilot exit status: 0
[2026-01-08 13:21:39] 2026-01-08 18:21:39,068 [wrapper] pandaids: 6962931502
[2026-01-08 13:21:39] 2026-01-08 18:21:39,095 [wrapper] cleanup supervisor_pilot 2297697 2206446
[2026-01-08 13:21:39] 2026-01-08 18:21:39,097 [wrapper] Test setup, not cleaning
[2026-01-08 13:21:39] 2026-01-08 18:21:39,099 [wrapper] apfmon messages muted
[2026-01-08 13:21:39] 2026-01-08 18:21:39,100 [wrapper] ==== wrapper stdout END ====
[2026-01-08 13:21:39] 2026-01-08 18:21:39,101 [wrapper] ==== wrapper stderr END ====
[2026-01-08 13:21:39]  *** Error codes and diagnostics ***
[2026-01-08 13:21:39]     "exeErrorCode": 0,
[2026-01-08 13:21:39]     "exeErrorDiag": "",
[2026-01-08 13:21:39]     "pilotErrorCode": 0,
[2026-01-08 13:21:39]     "pilotErrorDiag": "",
[2026-01-08 13:21:39]  *** Listing of results directory ***
[2026-01-08 13:21:39] total 553824
[2026-01-08 13:21:39] -rwx------ 1 boinc boinc     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc      5112 Jan  8 03:27 queuedata.json
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc       100 Jan  8 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 13:21:39] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 12:20 run_atlas
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc       105 Jan  8 12:20 job.xml
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc 412828867 Jan  8 12:20 EVNT.47961981._000024.pool.root.1
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc    592609 Jan  8 12:20 input.tar.gz
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc     15847 Jan  8 12:20 start_atlas.sh
[2026-01-08 13:21:39] drwxrwx--x 1 boinc boinc        76 Jan  8 12:20 shared
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc         0 Jan  8 12:20 boinc_setup_complete
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc      9257 Jan  8 12:20 init_data.xml
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc         0 Jan  8 12:20 boinc_lockfile
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc      2875 Jan  8 12:20 pandaJob.out
[2026-01-08 13:21:39] -rw------- 1 boinc boinc    989837 Jan  8 12:20 agis_schedconf.cvmfs.json
[2026-01-08 13:21:39] -rw------- 1 boinc boinc   1516240 Jan  8 12:20 agis_ddmendpoints.agis.ALL.json
[2026-01-08 13:21:39] drwx------ 1 boinc boinc       414 Jan  8 12:20 pilot3
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc       529 Jan  8 13:16 boinc_task_state.xml
[2026-01-08 13:21:39] -rw------- 1 boinc boinc        95 Jan  8 13:20 pilot_heartbeat.json
[2026-01-08 13:21:39] -rw------- 1 boinc boinc 145953635 Jan  8 13:20 HITS.47961985._000634.pool.root.1
[2026-01-08 13:21:39] -rw------- 1 boinc boinc      1040 Jan  8 13:20 memory_monitor_summary.json
[2026-01-08 13:21:39] -rw------- 1 boinc boinc   1667347 Jan  8 13:20 log.47961985._000634.job.log.tgz.1
[2026-01-08 13:21:39] -rw------- 1 boinc boinc      8596 Jan  8 13:20 heartbeat.json
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc      8192 Jan  8 13:21 boinc_mmap_file
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc        27 Jan  8 13:21 wrapper_checkpoint.txt
[2026-01-08 13:21:39] -rw------- 1 boinc boinc      4822 Jan  8 13:21 pilotlog.txt
[2026-01-08 13:21:39] -rw------- 1 boinc boinc    545622 Jan  8 13:21 log.47961985._000634.job.log.1
[2026-01-08 13:21:39] -rw------- 1 boinc boinc       353 Jan  8 13:21 output.list
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc       620 Jan  8 13:21 runtime_log
[2026-01-08 13:21:39] -rw------- 1 boinc boinc   2232320 Jan  8 13:21 result.tar.gz
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc      8920 Jan  8 13:21 runtime_log.err
[2026-01-08 13:21:39] -rw------- 1 boinc boinc       674 Jan  8 13:21 gcAMDmuR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF8jKDmK1wDMn.diag
[2026-01-08 13:21:39] -rw-r--r-- 1 boinc boinc     22940 Jan  8 13:21 stderr.txt
[2026-01-08 13:21:39] HITS file was successfully produced:
[2026-01-08 13:21:39] -rw------- 1 boinc boinc 145953635 Jan  8 13:20 shared/HITS.pool.root.1
[2026-01-08 13:21:39]  *** Contents of shared directory: ***
[2026-01-08 13:21:39] total 548468
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc 412828867 Jan  8 12:20 ATLAS.root_0
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc    592609 Jan  8 12:20 input.tar.gz
[2026-01-08 13:21:39] -rw-r--r-- 2 boinc boinc     15847 Jan  8 12:20 start_atlas.sh
[2026-01-08 13:21:39] -rw------- 1 boinc boinc 145953635 Jan  8 13:20 HITS.pool.root.1
[2026-01-08 13:21:39] -rw------- 1 boinc boinc   2232320 Jan  8 13:21 result.tar.gz
13:21:40 (2201695): run_atlas exited; CPU time 38467.897051
13:21:40 (2201695): called boinc_finish(0)

</stderr_txt>
]]>

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