Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:40 (18575): wrapper (7.7.26015): starting
00:10:40 (18575): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:10:40] Arguments: --nthreads 8
[2026-01-09 00:10:40] Threads: 8
[2026-01-09 00:10:40] Checking for CVMFS
[2026-01-09 00:10:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:10:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:10:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:10:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:10:43] 2.11.2.0 28330 34616 121912 154923 2 60 17721164 25165825 96 130560 0 14947466 99.793 10419131 4183 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 00:10:43] CVMFS is ok
[2026-01-09 00:10:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:10:43] Checking for apptainer binary...
[2026-01-09 00:10:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:10:43] Running /usr/bin/apptainer --version
[2026-01-09 00:10:43] apptainer version 1.3.2-1.el7
[2026-01-09 00:10:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:11:19] cg-vwn377.simple-grid.lan
[2026-01-09 00:11:19] apptainer works
[2026-01-09 00:11:19] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:11:19] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:11:19] Starting ATLAS job with PandaID=6962931402
[2026-01-09 00:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:50:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:50:21] 2026-01-09 04:49:51,225 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 05:50:21] 2026-01-09 04:49:51,225 | INFO     | log transfer has been attempted: DONE
[2026-01-09 05:50:21] 2026-01-09 04:49:51,225 | INFO     | job 6962931402 has finished - writing final server update
[2026-01-09 05:50:21] 2026-01-09 04:49:51,225 | INFO     | total number of processed events: 150 (read)
[2026-01-09 05:50:21] 2026-01-09 04:49:51,227 | INFO     | executing command: lscpu
[2026-01-09 05:50:21] 2026-01-09 04:49:51,254 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 05:50:21] 2026-01-09 04:49:51,656 | INFO     | time since job start (20050s) is within the limit (174528.0s)
[2026-01-09 05:50:21] 2026-01-09 04:49:52,175 | INFO     | monitor loop #1428: job 0:6962931402 is in state 'finished'
[2026-01-09 05:50:21] 2026-01-09 04:49:52,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:50:21] 2026-01-09 04:49:53,661 | INFO     | time since job start (20052s) is within the limit (174528.0s)
[2026-01-09 05:50:21] 2026-01-09 04:49:54,677 | INFO     | monitor loop #1429: job 0:6962931402 is in state 'finished'
[2026-01-09 05:50:21] 2026-01-09 04:49:54,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:50:21] 2026-01-09 04:49:55,667 | INFO     | time since job start (20054s) is within the limit (174528.0s)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,181 | INFO     | monitor loop #1430: job 0:6962931402 is in state 'finished'
[2026-01-09 05:50:21] 2026-01-09 04:49:57,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,672 | INFO     | time since job start (20056s) is within the limit (174528.0s)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,711 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 05:50:21] 2026-01-09 04:49:57,712 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 05:50:21] 2026-01-09 04:49:57,714 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962931402/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,715 | INFO     | extracted standard info from prmon json
[2026-01-09 05:50:21] 2026-01-09 04:49:57,715 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:50:21] 2026-01-09 04:49:57,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:50:21] 2026-01-09 04:49:57,723 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:50:21] 2026-01-09 04:49:57,723 | INFO     | sum of square deviations: 10161038157.721874
[2026-01-09 05:50:21] 2026-01-09 04:49:57,727 | INFO     | sum of deviations: 617704743349.959
[2026-01-09 05:50:21] 2026-01-09 04:49:57,727 | INFO     | mean x: 1767924448.384375
[2026-01-09 05:50:21] 2026-01-09 04:49:57,727 | INFO     | mean y: 2393718.471875
[2026-01-09 05:50:21] 2026-01-09 04:49:57,727 | INFO     | intersect: -107472384025.71773
[2026-01-09 05:50:21] 2026-01-09 04:49:57,728 | INFO     | chi2: 31.637089875785463
[2026-01-09 05:50:21] 2026-01-09 04:49:57,728 | INFO     | sum of square deviations: 9692241258.749166
[2026-01-09 05:50:21] 2026-01-09 04:49:57,732 | INFO     | sum of deviations: 689471575179.1622
[2026-01-09 05:50:21] 2026-01-09 04:49:57,732 | INFO     | mean x: 1767924295.8984127
[2026-01-09 05:50:21] 2026-01-09 04:49:57,732 | INFO     | mean y: 2416977.723809524
[2026-01-09 05:50:21] 2026-01-09 04:49:57,732 | INFO     | intersect: -125761430263.51784
[2026-01-09 05:50:21] 2026-01-09 04:49:57,733 | INFO     | chi2: 29.370624330139773
[2026-01-09 05:50:21] 2026-01-09 04:49:57,733 | INFO     | current chi2=29.370624330139773 (change=7.163950775954296 %)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,733 | INFO     | right removable region: 314
[2026-01-09 05:50:21] 2026-01-09 04:49:57,734 | INFO     | sum of square deviations: 9692068628.749166
[2026-01-09 05:50:21] 2026-01-09 04:49:57,737 | INFO     | sum of deviations: 501168869329.8415
[2026-01-09 05:50:21] 2026-01-09 04:49:57,737 | INFO     | mean x: 1767924600.8984127
[2026-01-09 05:50:21] 2026-01-09 04:49:57,737 | INFO     | mean y: 2431619.6825396824
[2026-01-09 05:50:21] 2026-01-09 04:49:57,737 | INFO     | intersect: -91415490315.42218
[2026-01-09 05:50:21] 2026-01-09 04:49:57,738 | INFO     | chi2: 25.010178355399713
[2026-01-09 05:50:21] 2026-01-09 04:49:57,738 | INFO     | current chi2=25.010178355399713 (change=20.94665326806144 %)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,738 | INFO     | left removable region: 10
[2026-01-09 05:50:21] 2026-01-09 04:49:57,739 | INFO     | sum of square deviations: 8711788432.549292
[2026-01-09 05:50:21] 2026-01-09 04:49:57,742 | INFO     | sum of deviations: 469433602663.9409
[2026-01-09 05:50:21] 2026-01-09 04:49:57,742 | INFO     | mean x: 1767924570.430921
[2026-01-09 05:50:21] 2026-01-09 04:49:57,742 | INFO     | mean y: 2496972.2828947366
[2026-01-09 05:50:21] 2026-01-09 04:49:57,742 | INFO     | intersect: -95261891822.4104
[2026-01-09 05:50:21] 2026-01-09 04:49:57,743 | INFO     | chi2: 16.691369184471387
[2026-01-09 05:50:21] 2026-01-09 04:49:57,743 | INFO     | current memory leak: 53.88 B/s (using 304 data points, chi2=16.69)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | ..............................
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | . Timing measurements:
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | . get job = 0 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | . initial setup = 9 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,744 | INFO     | . payload setup = 183 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,745 | INFO     | . stage-in = 0 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,745 | INFO     | . payload execution = 19646 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,745 | INFO     | . stage-out = 1 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,745 | INFO     | . log creation = 0 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,745 | INFO     | ..............................
[2026-01-09 05:50:21] 2026-01-09 04:49:57,863 | INFO     | 
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | job summary report
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | --------------------------------------------------
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | PanDA job id: 6962931402
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | task id: 47961985
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | errors: (none)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | pilot state: finished 
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | transexitcode: 0
[2026-01-09 05:50:21] 2026-01-09 04:49:57,864 | INFO     | exeerrorcode: 0
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | exeerrordiag: 
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | exitcode: 0
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | exitmsg: OK
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | cpuconsumptiontime: 64512 s
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | nevents: 150
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | neventsw: 0
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | pid: 28782
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | pgrp: 28782
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | corecount: 8
[2026-01-09 05:50:21] 2026-01-09 04:49:57,865 | INFO     | event service: False
[2026-01-09 05:50:21] 2026-01-09 04:49:57,866 | INFO     | sizes: {0: 2283720, 1: 2284576, 2: 2284604, 12: 2284604, 23: 2284632, 34: 2284660, 45: 2284816, 55: 2284844, 66: 2284872, 77: 2284900, 88: 2284956, 98: 2285264, 10
[2026-01-09 05:50:21] 2026-01-09 04:49:57,866 | INFO     | --------------------------------------------------
[2026-01-09 05:50:21] 2026-01-09 04:49:57,866 | INFO     | 
[2026-01-09 05:50:21] 2026-01-09 04:49:57,866 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 05:50:21] 2026-01-09 04:49:57,899 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,899 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:50:21] 2026-01-09 04:49:57,902 | INFO     | job 6962931402 has completed (purged errors)
[2026-01-09 05:50:21] 2026-01-09 04:49:57,902 | INFO     | overall cleanup function is called
[2026-01-09 05:50:21] 2026-01-09 04:49:58,912 | INFO     | --- collectZombieJob: --- 10, [28782]
[2026-01-09 05:50:21] 2026-01-09 04:49:58,913 | INFO     | zombie collector waiting for pid 28782
[2026-01-09 05:50:21] 2026-01-09 04:49:58,913 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:50:21] 2026-01-09 04:49:58,913 | INFO     | collected zombie processes
[2026-01-09 05:50:21] 2026-01-09 04:49:58,913 | INFO     | will attempt to kill all subprocesses of pid=28782
[2026-01-09 05:50:21] 2026-01-09 04:49:58,977 | INFO     | process IDs to be killed: [28782] (in reverse order)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,040 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:50:21] 2026-01-09 04:49:59,043 | INFO     | did not find any defunct processes belonging to 28782
[2026-01-09 05:50:21] 2026-01-09 04:49:59,044 | INFO     | did not find any defunct processes belonging to 28782
[2026-01-09 05:50:21] 2026-01-09 04:49:59,045 | INFO     | ready for new job
[2026-01-09 05:50:21] 2026-01-09 04:49:59,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:50:21] 2026-01-09 04:49:59,047 | INFO     | ***************************************
[2026-01-09 05:50:21] 2026-01-09 04:49:59,047 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:50:21] 2026-01-09 04:49:59,048 | INFO     | ***************************************
[2026-01-09 05:50:21] 2026-01-09 04:49:59,048 | INFO     | 
[2026-01-09 05:50:21] 2026-01-09 04:49:59,048 | INFO     | pilot is running in a VM
[2026-01-09 05:50:21] 2026-01-09 04:49:59,048 | INFO     | architecture information:
[2026-01-09 05:50:21] 2026-01-09 04:49:59,049 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:50:21] 2026-01-09 04:49:59,068 | INFO     | cat /etc/os-release:
[2026-01-09 05:50:21] NAME="CentOS Linux"
[2026-01-09 05:50:21] VERSION="7 (Core)"
[2026-01-09 05:50:21] ID="centos"
[2026-01-09 05:50:21] ID_LIKE="rhel fedora"
[2026-01-09 05:50:21] VERSION_ID="7"
[2026-01-09 05:50:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:50:21] ANSI_COLOR="0;31"
[2026-01-09 05:50:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:50:21] HOME_URL="https://www.centos.org/"
[2026-01-09 05:50:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:50:21] 
[2026-01-09 05:50:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:50:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:50:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:50:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:50:21] 
[2026-01-09 05:50:21] 2026-01-09 04:49:59,069 | INFO     | ***************************************
[2026-01-09 05:50:21] 2026-01-09 04:49:59,572 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 05:50:21] 2026-01-09 04:49:59,592 | INFO     | sufficient remaining disk space (497824038912 B)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:50:21] 2026-01-09 04:49:59,593 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:50:21] 2026-01-09 04:49:59,593 | INFO     | update_server=False
[2026-01-09 05:50:21] 2026-01-09 04:49:59,593 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:50:21] 2026-01-09 04:49:59,594 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,594 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:50:21] 2026-01-09 04:49:59,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:50:21] 2026-01-09 04:49:59,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:50:21] 2026-01-09 04:49:59,685 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:50:21] 2026-01-09 04:49:59,685 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:50:21] 2026-01-09 04:49:59,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:50:21] 2026-01-09 04:49:59,685 | INFO     | will abort loop
[2026-01-09 05:50:21] 2026-01-09 04:49:59,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:50:21] 2026-01-09 04:50:00,396 | INFO     | all data control threads have been joined
[2026-01-09 05:50:21] 2026-01-09 04:50:00,596 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:00,600 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:00,691 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:00,805 | INFO     | all payload control threads have been joined
[2026-01-09 05:50:21] 2026-01-09 04:50:01,004 | INFO     | all job control threads have been joined
[2026-01-09 05:50:21] 2026-01-09 04:50:01,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,392 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,402 | INFO     | [data] control thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,432 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,562 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,582 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:50:21] 2026-01-09 04:50:01,810 | INFO     | [payload] control thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,862 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,884 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,918 | INFO     | [job] validate thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:01,929 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:02,010 | INFO     | [job] control thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:05,741 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:50:21] 2026-01-09 04:50:15,389 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:50:21] 2026-01-09 04:50:16,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594383198016)>', '<ExcThread(monitor, started 140593665664768)>']
[2026-01-09 05:50:21] 2026-01-09 04:50:16,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:50:21] 2026-01-09 04:50:16,678 | INFO     | [monitor] control thread has ended
[2026-01-09 05:50:21] 2026-01-09 04:50:21,448 | INFO     | all workflow threads have been joined
[2026-01-09 05:50:21] 2026-01-09 04:50:21,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:50:21] 2026-01-09 04:50:21,449 | INFO     | traces error code: 0
[2026-01-09 05:50:21] 2026-01-09 04:50:21,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:50:21] 2026-01-09 04:50:21,598 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:50:21] 2026-01-09 04:50:21,609 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:50:21] 2026-01-09 04:50:21,619 [wrapper] pilotpid: 22299
[2026-01-09 05:50:21] 2026-01-09 04:50:21,625 [wrapper] Pilot exit status: 0
[2026-01-09 05:50:21] 2026-01-09 04:50:21,643 [wrapper] pandaids: 6962931402
[2026-01-09 05:50:21] 2026-01-09 04:50:21,677 [wrapper] cleanup supervisor_pilot 29273 22300
[2026-01-09 05:50:21] 2026-01-09 04:50:21,686 [wrapper] Test setup, not cleaning
[2026-01-09 05:50:21] 2026-01-09 04:50:21,690 [wrapper] apfmon messages muted
[2026-01-09 05:50:21] 2026-01-09 04:50:21,694 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:50:21] 2026-01-09 04:50:21,698 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:50:21]  *** Error codes and diagnostics ***
[2026-01-09 05:50:21]     "exeErrorCode": 0,
[2026-01-09 05:50:21]     "exeErrorDiag": "",
[2026-01-09 05:50:21]     "pilotErrorCode": 0,
[2026-01-09 05:50:21]     "pilotErrorDiag": "",
[2026-01-09 05:50:21]  *** Listing of results directory ***
[2026-01-09 05:50:21] total 555492
[2026-01-09 05:50:21] -rwx------. 1 boinc boinc     36322 Jan  8 09:21 runpilot2-wrapper.sh
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:27 queuedata.json
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc       100 Jan  9 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:50:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 00:10 run_atlas
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc       105 Jan  9 00:10 job.xml
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc      6390 Jan  9 00:10 init_data.xml
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc 413224344 Jan  9 00:10 EVNT.47961981._000023.pool.root.1
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 05:50:21] drwxrwx--x. 2 boinc boinc        68 Jan  9 00:10 shared
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc    592610 Jan  9 00:10 input.tar.gz
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc         0 Jan  9 00:10 boinc_lockfile
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc      2875 Jan  9 00:11 pandaJob.out
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc    989837 Jan  9 00:15 agis_schedconf.cvmfs.json
[2026-01-09 05:50:21] drwx------. 5 boinc boinc      4096 Jan  9 00:15 pilot3
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc       531 Jan  9 05:33 boinc_task_state.xml
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc        95 Jan  9 05:49 pilot_heartbeat.json
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc 143420647 Jan  9 05:49 HITS.47961985._000534.pool.root.1
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc      1022 Jan  9 05:49 memory_monitor_summary.json
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc   1516240 Jan  9 05:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc   1437087 Jan  9 05:49 log.47961985._000534.job.log.tgz.1
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc      8598 Jan  9 05:49 heartbeat.json
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:50 wrapper_checkpoint.txt
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:50 boinc_mmap_file
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc      4801 Jan  9 05:50 pilotlog.txt
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc   2701061 Jan  9 05:50 log.47961985._000534.job.log.1
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc       353 Jan  9 05:50 output.list
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:50 runtime_log
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc   4157440 Jan  9 05:50 result.tar.gz
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc       657 Jan  9 05:50 tfpNDmhR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDme6jKDmxpOS7n.diag
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:50 runtime_log.err
[2026-01-09 05:50:21] -rw-r--r--. 1 boinc boinc     21265 Jan  9 05:50 stderr.txt
[2026-01-09 05:50:21] HITS file was successfully produced:
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc 143420647 Jan  9 05:49 shared/HITS.pool.root.1
[2026-01-09 05:50:21]  *** Contents of shared directory: ***
[2026-01-09 05:50:21] total 548256
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc 413224344 Jan  9 00:10 ATLAS.root_0
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:10 start_atlas.sh
[2026-01-09 05:50:21] -rw-r--r--. 2 boinc boinc    592610 Jan  9 00:10 input.tar.gz
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc 143420647 Jan  9 05:49 HITS.pool.root.1
[2026-01-09 05:50:21] -rw-------. 1 boinc boinc   4157440 Jan  9 05:50 result.tar.gz
05:50:23 (18575): run_atlas exited; CPU time 64599.756259
05:50:23 (18575): called boinc_finish(0)

</stderr_txt>
]]>

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