Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:01 (4016465): wrapper (7.7.26015): starting
11:56:01 (4016465): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:56:01] Arguments: --nthreads 8
[2026-01-08 11:56:01] Threads: 8
[2026-01-08 11:56:01] Checking for CVMFS
[2026-01-08 11:56:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:56:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:56:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:56:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:56:02] 2.13.3.0 290515 94996 578292 154914 2 484 30120647 40960001 13144 16776704 0 300849376 99.611 312103695 39333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 11:56:02] CVMFS is ok
[2026-01-08 11:56:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:56:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:56:02] Further information can be found at the LHC@home message board.
[2026-01-08 11:56:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:56:02] Checking for apptainer binary...
[2026-01-08 11:56:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:56:02] Running /usr/bin/apptainer --version
[2026-01-08 11:56:02] apptainer version 1.4.5-2.el9
[2026-01-08 11:56:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:56:03] c6-5-37-4.aglt2.org
[2026-01-08 11:56:03] apptainer works
[2026-01-08 11:56:03] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:56:03] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:56:03] Starting ATLAS job with PandaID=6962922594
[2026-01-08 11:56:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:20:02 (4016465): BOINC client no longer exists - exiting
19:20:02 (4016465): timer handler: client dead, exiting
19:30:22 (751467): wrapper (7.7.26015): starting
19:30:22 (751467): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 19:30:22] Arguments: --nthreads 9
[2026-01-08 19:30:22] Threads: 9
[2026-01-08 19:30:22] This job has been restarted, cleaning up previous attempt
[2026-01-08 19:30:23] Checking for CVMFS
[2026-01-08 19:30:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 19:30:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 19:30:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 19:30:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 19:30:25] 2.13.3.0 290515 95450 563288 154925 0 87 30784404 40960000 8196 16776704 0 301215464 99.611 312118642 39332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 19:30:25] CVMFS is ok
[2026-01-08 19:30:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 19:30:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 19:30:25] Further information can be found at the LHC@home message board.
[2026-01-08 19:30:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 19:30:25] Checking for apptainer binary...
[2026-01-08 19:30:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 19:30:25] Running /usr/bin/apptainer --version
[2026-01-08 19:30:25] apptainer version 1.4.5-2.el9
[2026-01-08 19:30:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 19:30:25] c6-5-37-4.aglt2.org
[2026-01-08 19:30:25] apptainer works
[2026-01-08 19:30:25] Set ATHENA_PROC_NUMBER=9
[2026-01-08 19:30:25] Set ATHENA_CORE_NUMBER=9
[2026-01-08 19:30:25] Starting ATLAS job with PandaID=6962922594
[2026-01-08 19:30:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:29:04]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:29:04] 2026-01-09 10:28:04,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,697 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 05:29:04] 2026-01-09 10:28:04,727 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3016.4632500000002
[2026-01-09 05:29:04] 2026-01-09 10:28:04,738 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962922594/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,738 | INFO     | extracted standard info from prmon json
[2026-01-09 05:29:04] 2026-01-09 10:28:04,738 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:29:04] 2026-01-09 10:28:04,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:29:04] 2026-01-09 10:28:04,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:29:04] 2026-01-09 10:28:04,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:29:04] 2026-01-09 10:28:04,750 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:29:04] 2026-01-09 10:28:04,751 | INFO     | sum of square deviations: 62719368909.84676
[2026-01-09 05:29:04] 2026-01-09 10:28:04,758 | INFO     | sum of deviations: -145923431568.23853
[2026-01-09 05:29:04] 2026-01-09 10:28:04,758 | INFO     | mean x: 1767936566.0936968
[2026-01-09 05:29:04] 2026-01-09 10:28:04,758 | INFO     | mean y: 2563334.3679727428
[2026-01-09 05:29:04] 2026-01-09 10:28:04,758 | INFO     | intersect: 4115859992.218392
[2026-01-09 05:29:04] 2026-01-09 10:28:04,759 | INFO     | chi2: 3.5751087459207374
[2026-01-09 05:29:04] 2026-01-09 10:28:04,760 | INFO     | sum of square deviations: 61130430871.72003
[2026-01-09 05:29:04] 2026-01-09 10:28:04,766 | INFO     | sum of deviations: -31531871273.946793
[2026-01-09 05:29:04] 2026-01-09 10:28:04,766 | INFO     | mean x: 1767936413.5996563
[2026-01-09 05:29:04] 2026-01-09 10:28:04,767 | INFO     | mean y: 2574275.266323024
[2026-01-09 05:29:04] 2026-01-09 10:28:04,767 | INFO     | intersect: 914498870.2545242
[2026-01-09 05:29:04] 2026-01-09 10:28:04,767 | INFO     | chi2: 1.4788188406928358
[2026-01-09 05:29:04] 2026-01-09 10:28:04,767 | INFO     | current chi2=1.4788188406928358 (change=58.63569626014329 %)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,768 | INFO     | sum of square deviations: 59568527727.76078
[2026-01-09 05:29:04] 2026-01-09 10:28:04,775 | INFO     | sum of deviations: -31735699104.72441
[2026-01-09 05:29:04] 2026-01-09 10:28:04,775 | INFO     | mean x: 1767936261.103986
[2026-01-09 05:29:04] 2026-01-09 10:28:04,775 | INFO     | mean y: 2574255.445407279
[2026-01-09 05:29:04] 2026-01-09 10:28:04,775 | INFO     | intersect: 944459095.6272159
[2026-01-09 05:29:04] 2026-01-09 10:28:04,776 | INFO     | chi2: 1.47845075657565
[2026-01-09 05:29:04] 2026-01-09 10:28:04,776 | INFO     | current chi2=1.47845075657565 (change=0.024890413014575716 %)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,776 | INFO     | right removable region: 576
[2026-01-09 05:29:04] 2026-01-09 10:28:04,777 | INFO     | sum of square deviations: 61130110741.31423
[2026-01-09 05:29:04] 2026-01-09 10:28:04,783 | INFO     | sum of deviations: -229764571925.067
[2026-01-09 05:29:04] 2026-01-09 10:28:04,783 | INFO     | mean x: 1767936718.6030927
[2026-01-09 05:29:04] 2026-01-09 10:28:04,783 | INFO     | mean y: 2571346.592783505
[2026-01-09 05:29:04] 2026-01-09 10:28:04,784 | INFO     | intersect: 6647565416.036117
[2026-01-09 05:29:04] 2026-01-09 10:28:04,784 | INFO     | chi2: 2.2857291747428663
[2026-01-09 05:29:04] 2026-01-09 10:28:04,784 | INFO     | current chi2=2.2857291747428663 (change=36.06546437640746 %)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,785 | INFO     | sum of square deviations: 59567958472.9012
[2026-01-09 05:29:04] 2026-01-09 10:28:04,791 | INFO     | sum of deviations: -225662614333.3449
[2026-01-09 05:29:04] 2026-01-09 10:28:04,792 | INFO     | mean x: 1767936871.1109185
[2026-01-09 05:29:04] 2026-01-09 10:28:04,792 | INFO     | mean y: 2570941.896013865
[2026-01-09 05:29:04] 2026-01-09 10:28:04,792 | INFO     | intersect: 6700085285.831409
[2026-01-09 05:29:04] 2026-01-09 10:28:04,793 | INFO     | chi2: 2.274480449405222
[2026-01-09 05:29:04] 2026-01-09 10:28:04,793 | INFO     | current chi2=2.274480449405222 (change=0.49212852782131306 %)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,793 | INFO     | left removable region: 20
[2026-01-09 05:29:04] 2026-01-09 10:28:04,793 | INFO     | sum of square deviations: 53298093163.67632
[2026-01-09 05:29:04] 2026-01-09 10:28:04,799 | INFO     | sum of deviations: -83921362270.5287
[2026-01-09 05:29:04] 2026-01-09 10:28:04,800 | INFO     | mean x: 1767936840.6294963
[2026-01-09 05:29:04] 2026-01-09 10:28:04,800 | INFO     | mean y: 2579319.8615107914
[2026-01-09 05:29:04] 2026-01-09 10:28:04,800 | INFO     | intersect: 2786312456.772258
[2026-01-09 05:29:04] 2026-01-09 10:28:04,801 | INFO     | chi2: 0.13375036066459026
[2026-01-09 05:29:04] 2026-01-09 10:28:04,801 | INFO     | current memory leak: -1.57 B/s (using 556 data points, chi2=0.13)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | could have reported an average CPU frequency of 3022 MHz (23 samples)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | ..............................
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . Timing measurements:
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . get job = 0 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . initial setup = 2 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . payload setup = 8 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . stage-in = 0 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . payload execution = 35789 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . stage-out = 2 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | . log creation = 0 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,802 | INFO     | ..............................
[2026-01-09 05:29:04] 2026-01-09 10:28:04,900 | INFO     | 
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | job summary report
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | --------------------------------------------------
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | PanDA job id: 6962922594
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | task id: 47898826
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | errors: (none)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | pilot state: finished 
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | transexitcode: 0
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | exeerrorcode: 0
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | exeerrordiag: 
[2026-01-09 05:29:04] 2026-01-09 10:28:04,901 | INFO     | exitcode: 0
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | exitmsg: OK
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | cpuconsumptiontime: 54242 s
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | nevents: 400
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | neventsw: 0
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | pid: 772240
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | pgrp: 772240
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | corecount: 9
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | event service: False
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | sizes: {0: 2283968, 1: 2283996, 9: 2284258, 11: 2284286, 35801: 2324610, 35804: 2333636, 35806: 2333820, 35812: 2334014}
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | --------------------------------------------------
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | 
[2026-01-09 05:29:04] 2026-01-09 10:28:04,902 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 05:29:04] 2026-01-09 10:28:04,911 | INFO     | time since job start (35833s) is within the limit (174528.0s)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,923 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:29:04] 2026-01-09 10:28:04,924 | INFO     | job 6962922594 has completed (purged errors)
[2026-01-09 05:29:04] 2026-01-09 10:28:04,924 | INFO     | overall cleanup function is called
[2026-01-09 05:29:04] 2026-01-09 10:28:05,932 | INFO     | --- collectZombieJob: --- 10, [772240]
[2026-01-09 05:29:04] 2026-01-09 10:28:05,932 | INFO     | zombie collector waiting for pid 772240
[2026-01-09 05:29:04] 2026-01-09 10:28:05,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:29:04] 2026-01-09 10:28:05,933 | INFO     | collected zombie processes
[2026-01-09 05:29:04] 2026-01-09 10:28:05,933 | INFO     | will attempt to kill all subprocesses of pid=772240
[2026-01-09 05:29:04] 2026-01-09 10:28:06,489 | INFO     | process IDs to be killed: [772240] (in reverse order)
[2026-01-09 05:29:04] 2026-01-09 10:28:06,581 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:29:04] 2026-01-09 10:28:06,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:29:04] 2026-01-09 10:28:06,633 | INFO     | did not find any defunct processes belonging to 772240
[2026-01-09 05:29:04] 2026-01-09 10:28:06,710 | INFO     | did not find any defunct processes belonging to 772240
[2026-01-09 05:29:04] 2026-01-09 10:28:06,710 | INFO     | ready for new job
[2026-01-09 05:29:04] 2026-01-09 10:28:06,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:29:04] 2026-01-09 10:28:06,713 | INFO     | ***************************************
[2026-01-09 05:29:04] 2026-01-09 10:28:06,714 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:29:04] 2026-01-09 10:28:06,714 | INFO     | ***************************************
[2026-01-09 05:29:04] 2026-01-09 10:28:06,714 | INFO     | 
[2026-01-09 05:29:04] 2026-01-09 10:28:06,717 | INFO     | architecture information:
[2026-01-09 05:29:04] 2026-01-09 10:28:06,717 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:29:04] 2026-01-09 10:28:06,733 | INFO     | cat /etc/os-release:
[2026-01-09 05:29:04] NAME="CentOS Linux"
[2026-01-09 05:29:04] VERSION="7 (Core)"
[2026-01-09 05:29:04] ID="centos"
[2026-01-09 05:29:04] ID_LIKE="rhel fedora"
[2026-01-09 05:29:04] VERSION_ID="7"
[2026-01-09 05:29:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:29:04] ANSI_COLOR="0;31"
[2026-01-09 05:29:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:29:04] HOME_URL="https://www.centos.org/"
[2026-01-09 05:29:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:29:04] 
[2026-01-09 05:29:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:29:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:29:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:29:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:29:04] 
[2026-01-09 05:29:04] 2026-01-09 10:28:06,733 | INFO     | ***************************************
[2026-01-09 05:29:04] 2026-01-09 10:28:07,236 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 05:29:04] 2026-01-09 10:28:07,256 | INFO     | sufficient remaining disk space (73636249600 B)
[2026-01-09 05:29:04] 2026-01-09 10:28:07,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:29:04] 2026-01-09 10:28:07,256 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:29:04] 2026-01-09 10:28:07,256 | INFO     | update_server=False
[2026-01-09 05:29:04] 2026-01-09 10:28:07,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:29:04] 2026-01-09 10:28:07,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:29:04] 2026-01-09 10:28:07,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:29:04] 2026-01-09 10:28:07,649 | INFO     | aborting loop
[2026-01-09 05:29:04] 2026-01-09 10:28:07,796 | INFO     | all data control threads have been joined
[2026-01-09 05:29:04] 2026-01-09 10:28:08,096 | INFO     | all payload control threads have been joined
[2026-01-09 05:29:04] 2026-01-09 10:28:08,262 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:08,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:08,627 | INFO     | all job control threads have been joined
[2026-01-09 05:29:04] 2026-01-09 10:28:08,668 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:08,685 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:08,802 | INFO     | [data] control thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:08,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:29:04] 2026-01-09 10:28:09,074 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,106 | INFO     | [payload] control thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,316 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,320 | INFO     | [job] validate thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,369 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,416 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,487 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,633 | INFO     | [job] control thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,652 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:09,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:29:04] 2026-01-09 10:28:10,920 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:12,833 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:29:04] 2026-01-09 10:28:38,333 | INFO     | PID=758837 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 05:29:04] 2026-01-09 10:28:38,333 | INFO     | .. there are 11 such processes running
[2026-01-09 05:29:04] 2026-01-09 10:28:38,334 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:29:04] 2026-01-09 10:28:38,334 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:29:04] 2026-01-09 10:28:38,334 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:29:04] 2026-01-09 10:28:56,492 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:29:04] 2026-01-09 10:28:58,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664228656960)>', '<ExcThread(monitor, started 139663738136320)>']
[2026-01-09 05:29:04] 2026-01-09 10:28:59,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:29:04] 2026-01-09 10:28:59,453 | INFO     | [monitor] control thread has ended
[2026-01-09 05:29:04] 2026-01-09 10:29:03,559 | INFO     | all workflow threads have been joined
[2026-01-09 05:29:04] 2026-01-09 10:29:03,559 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:29:04] 2026-01-09 10:29:03,560 | INFO     | traces error code: 0
[2026-01-09 05:29:04] 2026-01-09 10:29:03,560 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:29:04] 2026-01-09 10:29:03,891 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:29:04] 2026-01-09 10:29:03,926 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:29:04] 2026-01-09 10:29:03,928 [wrapper] pilotpid: 758837
[2026-01-09 05:29:04] 2026-01-09 10:29:03,930 [wrapper] Pilot exit status: 0
[2026-01-09 05:29:04] 2026-01-09 10:29:03,995 [wrapper] pandaids: 6962922594 6962922594
[2026-01-09 05:29:04] 2026-01-09 10:29:04,566 [wrapper] cleanup supervisor_pilot 2084860 758838
[2026-01-09 05:29:04] 2026-01-09 10:29:04,568 [wrapper] Test setup, not cleaning
[2026-01-09 05:29:04] 2026-01-09 10:29:04,570 [wrapper] apfmon messages muted
[2026-01-09 05:29:04] 2026-01-09 10:29:04,573 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:29:04] 2026-01-09 10:29:04,578 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:29:04]  *** Error codes and diagnostics ***
[2026-01-09 05:29:04]     "exeErrorCode": 0,
[2026-01-09 05:29:04]     "exeErrorDiag": "",
[2026-01-09 05:29:04]     "pilotErrorCode": 0,
[2026-01-09 05:29:04]     "pilotErrorDiag": "",
[2026-01-09 05:29:04]  *** Listing of results directory ***
[2026-01-09 05:29:04] total 663188
[2026-01-09 05:29:04] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 05:29:04] -rwx------. 1 boincer umatlas     36322 Jan  8 03:20 runpilot2-wrapper.sh
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:23 queuedata.json
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas       100 Jan  8 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:29:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 11:56 run_atlas
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas       105 Jan  8 11:56 job.xml
[2026-01-09 05:29:04] -rw-r--r--. 3 boincer umatlas 223259674 Jan  8 11:56 EVNT.47898824._000847.pool.root.1
[2026-01-09 05:29:04] -rw-r--r--. 3 boincer umatlas 223259674 Jan  8 11:56 ATLAS.root_0
[2026-01-09 05:29:04] -rw-r--r--. 2 boincer umatlas    592402 Jan  8 11:56 input.tar.gz
[2026-01-09 05:29:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:56 start_atlas.sh
[2026-01-09 05:29:04] drwxrwx--x. 2 boincer umatlas      4096 Jan  8 11:56 shared
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas         0 Jan  8 11:56 boinc_lockfile
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas      2518 Jan  8 19:30 pandaJob.out
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas        57 Jan  8 19:30 setup.sh.local
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas    989837 Jan  8 19:30 agis_schedconf.cvmfs.json
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas 218573494 Jan  9 05:24 HITS.47898826._022029.pool.root.1
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas       532 Jan  9 05:24 boinc_task_state.xml
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas      6842 Jan  9 05:27 init_data.xml
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas      1050 Jan  9 05:27 memory_monitor_summary.json
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas   1516240 Jan  9 05:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas    719123 Jan  9 05:27 log.47898826._022029.job.log.tgz.1
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas      7818 Jan  9 05:28 heartbeat.json
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas        96 Jan  9 05:28 pilot_heartbeat.json
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas        29 Jan  9 05:29 wrapper_checkpoint.txt
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 05:29 boinc_mmap_file
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas      4823 Jan  9 05:29 pilotlog.txt
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas   4327934 Jan  9 05:29 log.47898826._022029.job.log.1
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas       357 Jan  9 05:29 output.list
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas       620 Jan  9 05:29 runtime_log
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas   5068800 Jan  9 05:29 result.tar.gz
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas      9433 Jan  9 05:29 runtime_log.err
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas       784 Jan  9 05:29 hnqLDmIR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfreKDmCt7lsn.diag
[2026-01-09 05:29:04] -rw-r--r--. 1 boincer umatlas     23469 Jan  9 05:29 stderr.txt
[2026-01-09 05:29:04] HITS file was successfully produced:
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas 218573494 Jan  9 05:24 shared/HITS.pool.root.1
[2026-01-09 05:29:04]  *** Contents of shared directory: ***
[2026-01-09 05:29:04] total 437032
[2026-01-09 05:29:04] -rw-r--r--. 3 boincer umatlas 223259674 Jan  8 11:56 ATLAS.root_0
[2026-01-09 05:29:04] -rw-r--r--. 2 boincer umatlas    592402 Jan  8 11:56 input.tar.gz
[2026-01-09 05:29:04] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 11:56 start_atlas.sh
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas 218573494 Jan  9 05:24 HITS.pool.root.1
[2026-01-09 05:29:04] -rw-------. 1 boincer umatlas   5068800 Jan  9 05:29 result.tar.gz
05:29:06 (751467): run_atlas exited; CPU time 55117.900657
05:29:06 (751467): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN