Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:31:45 (13536): wrapper (7.7.26015): starting
02:31:45 (13536): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:31:45] Arguments: --nthreads 8
[2026-01-09 02:31:45] Threads: 8
[2026-01-09 02:31:45] Checking for CVMFS
[2026-01-09 02:31:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:31:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:31:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:31:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:31:47] 2.11.2.0 28634 34758 100304 154926 2 100 16045249 25165825 1096 130560 0 7161164 99.640 10304898 2606 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 02:31:47] CVMFS is ok
[2026-01-09 02:31:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:31:47] Checking for apptainer binary...
[2026-01-09 02:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:31:48] Running /usr/bin/apptainer --version
[2026-01-09 02:31:48] apptainer version 1.3.2-1.el7
[2026-01-09 02:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:32:12] cg-vwn465.simple-grid.lan
[2026-01-09 02:32:12] apptainer works
[2026-01-09 02:32:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:32:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:32:12] Starting ATLAS job with PandaID=6962920350
[2026-01-09 02:32:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:54:10]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:54:10] 2026-01-09 05:53:13,387 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,389 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962920350/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,390 | INFO     | extracted standard info from prmon json
[2026-01-09 06:54:10] 2026-01-09 05:53:13,390 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:54:10] 2026-01-09 05:53:13,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:54:10] 2026-01-09 05:53:13,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:54:10] 2026-01-09 05:53:13,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:54:10] 2026-01-09 05:53:13,395 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:54:10] 2026-01-09 05:53:13,396 | INFO     | sum of square deviations: 4504437945.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,398 | INFO     | sum of deviations: 98932351294.5
[2026-01-09 06:54:10] 2026-01-09 05:53:13,398 | INFO     | mean x: 1767930538.5
[2026-01-09 06:54:10] 2026-01-09 05:53:13,398 | INFO     | mean y: 2438306.2090163934
[2026-01-09 06:54:10] 2026-01-09 05:53:13,398 | INFO     | intersect: -38827162020.13238
[2026-01-09 06:54:10] 2026-01-09 05:53:13,399 | INFO     | chi2: 6.923598246375795
[2026-01-09 06:54:10] 2026-01-09 05:53:13,399 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,401 | INFO     | sum of deviations: 112590027515.99997
[2026-01-09 06:54:10] 2026-01-09 05:53:13,401 | INFO     | mean x: 1767930386.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,401 | INFO     | mean y: 2445831.9832635983
[2026-01-09 06:54:10] 2026-01-09 05:53:13,401 | INFO     | intersect: -47019496206.66919
[2026-01-09 06:54:10] 2026-01-09 05:53:13,402 | INFO     | chi2: 6.210263710489812
[2026-01-09 06:54:10] 2026-01-09 05:53:13,402 | INFO     | current chi2=6.210263710489812 (change=10.302945238906407 %)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,402 | INFO     | right removable region: 238
[2026-01-09 06:54:10] 2026-01-09 05:53:13,402 | INFO     | sum of square deviations: 4233158440.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,404 | INFO     | sum of deviations: 16617191230.999998
[2026-01-09 06:54:10] 2026-01-09 05:53:13,405 | INFO     | mean x: 1767930691.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,405 | INFO     | mean y: 2484540.8033472802
[2026-01-09 06:54:10] 2026-01-09 05:53:13,405 | INFO     | intersect: -6937497222.671814
[2026-01-09 06:54:10] 2026-01-09 05:53:13,405 | INFO     | chi2: 2.346264852667208
[2026-01-09 06:54:10] 2026-01-09 05:53:13,405 | INFO     | current chi2=2.346264852667208 (change=66.11205952200685 %)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,406 | INFO     | sum of square deviations: 3972995422.5
[2026-01-09 06:54:10] 2026-01-09 05:53:13,407 | INFO     | sum of deviations: -25564140897.000004
[2026-01-09 06:54:10] 2026-01-09 05:53:13,408 | INFO     | mean x: 1767930843.5
[2026-01-09 06:54:10] 2026-01-09 05:53:13,408 | INFO     | mean y: 2509117.9914529915
[2026-01-09 06:54:10] 2026-01-09 05:53:13,408 | INFO     | intersect: 11378216455.440836
[2026-01-09 06:54:10] 2026-01-09 05:53:13,408 | INFO     | chi2: 0.912785844381015
[2026-01-09 06:54:10] 2026-01-09 05:53:13,408 | INFO     | current chi2=0.912785844381015 (change=61.09621454954798 %)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,409 | INFO     | sum of square deviations: 3723716330.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,410 | INFO     | sum of deviations: -27032755730.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | mean x: 1767930996.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | mean y: 2509994.593886463
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | intersect: 12837012552.51661
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | chi2: 0.8992417732863356
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | current chi2=0.8992417732863356 (change=1.4838169520325954 %)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,411 | INFO     | left removable region: 30
[2026-01-09 06:54:10] 2026-01-09 05:53:13,412 | INFO     | sum of square deviations: 2790348132.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,413 | INFO     | sum of deviations: 8677479970.0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,413 | INFO     | mean x: 1767931270.5
[2026-01-09 06:54:10] 2026-01-09 05:53:13,413 | INFO     | mean y: 2505228.846153846
[2026-01-09 06:54:10] 2026-01-09 05:53:13,414 | INFO     | intersect: -5495442504.687907
[2026-01-09 06:54:10] 2026-01-09 05:53:13,414 | INFO     | chi2: 0.00043819150240951676
[2026-01-09 06:54:10] 2026-01-09 05:53:13,414 | INFO     | current memory leak: 3.11 B/s (using 208 data points, chi2=0.00)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | ..............................
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . Timing measurements:
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . get job = 0 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . initial setup = 9 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . payload setup = 146 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . stage-in = 0 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . payload execution = 15024 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . stage-out = 1 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,415 | INFO     | . log creation = 0 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,416 | INFO     | ..............................
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | 
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | job summary report
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | --------------------------------------------------
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | PanDA job id: 6962920350
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | task id: 47898826
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | errors: (none)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | pilot state: finished 
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | transexitcode: 0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | exeerrorcode: 0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | exeerrordiag: 
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | exitcode: 0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | exitmsg: OK
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | cpuconsumptiontime: 73585 s
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | nevents: 400
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | neventsw: 0
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | pid: 23808
[2026-01-09 06:54:10] 2026-01-09 05:53:13,521 | INFO     | pgrp: 23808
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | corecount: 8
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | event service: False
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 98: 2284713, 10
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | --------------------------------------------------
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | 
[2026-01-09 06:54:10] 2026-01-09 05:53:13,522 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 06:54:10] 2026-01-09 05:53:13,561 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,561 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,561 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,562 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | job 6962920350 has completed (purged errors)
[2026-01-09 06:54:10] 2026-01-09 05:53:13,563 | INFO     | overall cleanup function is called
[2026-01-09 06:54:10] 2026-01-09 05:53:14,571 | INFO     | --- collectZombieJob: --- 10, [23808]
[2026-01-09 06:54:10] 2026-01-09 05:53:14,572 | INFO     | zombie collector waiting for pid 23808
[2026-01-09 06:54:10] 2026-01-09 05:53:14,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:54:10] 2026-01-09 05:53:14,572 | INFO     | collected zombie processes
[2026-01-09 06:54:10] 2026-01-09 05:53:14,572 | INFO     | will attempt to kill all subprocesses of pid=23808
[2026-01-09 06:54:10] 2026-01-09 05:53:14,635 | INFO     | process IDs to be killed: [23808] (in reverse order)
[2026-01-09 06:54:10] 2026-01-09 05:53:14,699 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:54:10] 2026-01-09 05:53:14,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:54:10] 2026-01-09 05:53:14,702 | INFO     | did not find any defunct processes belonging to 23808
[2026-01-09 06:54:10] 2026-01-09 05:53:14,703 | INFO     | did not find any defunct processes belonging to 23808
[2026-01-09 06:54:10] 2026-01-09 05:53:14,704 | INFO     | ready for new job
[2026-01-09 06:54:10] 2026-01-09 05:53:14,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:54:10] 2026-01-09 05:53:14,706 | INFO     | ***************************************
[2026-01-09 06:54:10] 2026-01-09 05:53:14,706 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:54:10] 2026-01-09 05:53:14,706 | INFO     | ***************************************
[2026-01-09 06:54:10] 2026-01-09 05:53:14,706 | INFO     | 
[2026-01-09 06:54:10] 2026-01-09 05:53:14,706 | INFO     | pilot is running in a VM
[2026-01-09 06:54:10] 2026-01-09 05:53:14,707 | INFO     | architecture information:
[2026-01-09 06:54:10] 2026-01-09 05:53:14,708 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:54:10] 2026-01-09 05:53:14,726 | INFO     | cat /etc/os-release:
[2026-01-09 06:54:10] NAME="CentOS Linux"
[2026-01-09 06:54:10] VERSION="7 (Core)"
[2026-01-09 06:54:10] ID="centos"
[2026-01-09 06:54:10] ID_LIKE="rhel fedora"
[2026-01-09 06:54:10] VERSION_ID="7"
[2026-01-09 06:54:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:54:10] ANSI_COLOR="0;31"
[2026-01-09 06:54:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:54:10] HOME_URL="https://www.centos.org/"
[2026-01-09 06:54:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:54:10] 
[2026-01-09 06:54:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:54:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:54:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:54:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:54:10] 
[2026-01-09 06:54:10] 2026-01-09 05:53:14,726 | INFO     | ***************************************
[2026-01-09 06:54:10] 2026-01-09 05:53:15,230 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 06:54:10] 2026-01-09 05:53:15,250 | INFO     | sufficient remaining disk space (497898487808 B)
[2026-01-09 06:54:10] 2026-01-09 05:53:15,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:54:10] 2026-01-09 05:53:15,250 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:54:10] 2026-01-09 05:53:15,250 | INFO     | update_server=False
[2026-01-09 06:54:10] 2026-01-09 05:53:15,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:54:10] 2026-01-09 05:53:15,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:54:10] 2026-01-09 05:53:15,467 | INFO     | all data control threads have been joined
[2026-01-09 06:54:10] 2026-01-09 05:53:15,599 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 06:54:10] 2026-01-09 05:53:15,600 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 06:54:10] 2026-01-09 05:53:15,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:54:10] 2026-01-09 05:53:15,600 | INFO     | will abort loop
[2026-01-09 06:54:10] 2026-01-09 05:53:15,798 | INFO     | all payload control threads have been joined
[2026-01-09 06:54:10] 2026-01-09 05:53:16,100 | INFO     | all job control threads have been joined
[2026-01-09 06:54:10] 2026-01-09 05:53:16,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:54:10] 2026-01-09 05:53:16,256 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,257 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,314 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,344 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,473 | INFO     | [data] control thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,606 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:54:10] 2026-01-09 05:53:16,804 | INFO     | [payload] control thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:16,847 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:17,018 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:17,019 | INFO     | [job] validate thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:17,106 | INFO     | [job] control thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:17,435 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:17,531 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:18,110 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:20,684 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:26,026 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:54:10] 2026-01-09 05:53:27,032 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:54:10] 2026-01-09 05:53:45,887 | INFO     | PID=17276 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:54:10] 2026-01-09 05:53:45,887 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:54:10] 2026-01-09 05:53:45,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:54:10] 2026-01-09 05:53:45,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:54:10] 2026-01-09 05:54:03,796 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:54:10] 2026-01-09 05:54:05,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915373664064)>', '<ExcThread(monitor, started 139914792396544)>']
[2026-01-09 06:54:10] 2026-01-09 05:54:05,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:54:10] 2026-01-09 05:54:05,985 | INFO     | [monitor] control thread has ended
[2026-01-09 06:54:10] 2026-01-09 05:54:10,281 | INFO     | all workflow threads have been joined
[2026-01-09 06:54:10] 2026-01-09 05:54:10,282 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:54:10] 2026-01-09 05:54:10,282 | INFO     | traces error code: 0
[2026-01-09 06:54:10] 2026-01-09 05:54:10,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:54:10] 2026-01-09 05:54:10,419 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:54:10] 2026-01-09 05:54:10,422 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:54:10] 2026-01-09 05:54:10,426 [wrapper] pilotpid: 17276
[2026-01-09 06:54:10] 2026-01-09 05:54:10,430 [wrapper] Pilot exit status: 0
[2026-01-09 06:54:10] 2026-01-09 05:54:10,447 [wrapper] pandaids: 6962920350
[2026-01-09 06:54:10] 2026-01-09 05:54:10,484 [wrapper] cleanup supervisor_pilot 16093 17277
[2026-01-09 06:54:10] 2026-01-09 05:54:10,487 [wrapper] Test setup, not cleaning
[2026-01-09 06:54:10] 2026-01-09 05:54:10,498 [wrapper] apfmon messages muted
[2026-01-09 06:54:10] 2026-01-09 05:54:10,502 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:54:10] 2026-01-09 05:54:10,505 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:54:10]  *** Error codes and diagnostics ***
[2026-01-09 06:54:10]     "exeErrorCode": 0,
[2026-01-09 06:54:10]     "exeErrorDiag": "",
[2026-01-09 06:54:10]     "pilotErrorCode": 0,
[2026-01-09 06:54:10]     "pilotErrorDiag": "",
[2026-01-09 06:54:10]  *** Listing of results directory ***
[2026-01-09 06:54:10] total 447836
[2026-01-09 06:54:10] -rwx------. 1 boinc boinc     36322 Jan  8 09:08 runpilot2-wrapper.sh
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:16 queuedata.json
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc       100 Jan  9 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:54:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 02:31 run_atlas
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc       105 Jan  9 02:31 job.xml
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc      6390 Jan  9 02:31 init_data.xml
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc 225245356 Jan  9 02:31 EVNT.47898824._000844.pool.root.1
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:31 start_atlas.sh
[2026-01-09 06:54:10] drwxrwx--x. 2 boinc boinc        68 Jan  9 02:31 shared
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc    592399 Jan  9 02:31 input.tar.gz
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc         0 Jan  9 02:31 boinc_lockfile
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc      2519 Jan  9 02:32 pandaJob.out
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc    989821 Jan  9 02:36 agis_schedconf.cvmfs.json
[2026-01-09 06:54:10] drwx------. 5 boinc boinc      4096 Jan  9 02:36 pilot3
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc 224417240 Jan  9 06:52 HITS.47898826._021955.pool.root.1
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:52 boinc_task_state.xml
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc        95 Jan  9 06:52 pilot_heartbeat.json
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc      1017 Jan  9 06:52 memory_monitor_summary.json
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc   1516240 Jan  9 06:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc    459972 Jan  9 06:53 log.47898826._021955.job.log.tgz.1
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc      7775 Jan  9 06:53 heartbeat.json
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:54 boinc_mmap_file
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:54 wrapper_checkpoint.txt
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc      5067 Jan  9 06:54 pilotlog.txt
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc   2049292 Jan  9 06:54 log.47898826._021955.job.log.1
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc       357 Jan  9 06:54 output.list
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:54 runtime_log
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc   2529280 Jan  9 06:54 result.tar.gz
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:54 runtime_log.err
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc       657 Jan  9 06:54 K8EODmwE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFzjKDmtLG4En.diag
[2026-01-09 06:54:10] -rw-r--r--. 1 boinc boinc     20779 Jan  9 06:54 stderr.txt
[2026-01-09 06:54:10] HITS file was successfully produced:
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc 224417240 Jan  9 06:52 shared/HITS.pool.root.1
[2026-01-09 06:54:10]  *** Contents of shared directory: ***
[2026-01-09 06:54:10] total 442196
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc 225245356 Jan  9 02:31 ATLAS.root_0
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:31 start_atlas.sh
[2026-01-09 06:54:10] -rw-r--r--. 2 boinc boinc    592399 Jan  9 02:31 input.tar.gz
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc 224417240 Jan  9 06:52 HITS.pool.root.1
[2026-01-09 06:54:10] -rw-------. 1 boinc boinc   2529280 Jan  9 06:54 result.tar.gz
06:54:12 (13536): run_atlas exited; CPU time 73731.037395
06:54:12 (13536): called boinc_finish(0)

</stderr_txt>
]]>

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