Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:46:18 (377): wrapper (7.7.26015): starting
23:46:18 (377): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:46:18] Arguments: --nthreads 8
[2026-01-08 23:46:18] Threads: 8
[2026-01-08 23:46:18] Checking for CVMFS
[2026-01-08 23:46:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:46:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:46:21] 2.11.2.0 9669 34594 99480 154922 1 85 15661027 25165825 96 130560 0 14420200 99.846 7340081 3513 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 23:46:21] CVMFS is ok
[2026-01-08 23:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:46:21] Checking for apptainer binary...
[2026-01-08 23:46:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:46:21] Running /usr/bin/apptainer --version
[2026-01-08 23:46:22] apptainer version 1.3.2-1.el7
[2026-01-08 23:46:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:46:42] cg-vwn394.simple-grid.lan
[2026-01-08 23:46:42] apptainer works
[2026-01-08 23:46:42] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:46:42] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:46:42] Starting ATLAS job with PandaID=6962922874
[2026-01-08 23:46:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:46:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:46:46] 2026-01-09 04:46:13,776 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 05:46:46] 2026-01-09 04:46:13,777 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 05:46:46] 2026-01-09 04:46:13,779 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6962922874/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,780 | INFO     | extracted standard info from prmon json
[2026-01-09 05:46:46] 2026-01-09 04:46:13,780 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:46:46] 2026-01-09 04:46:13,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:46:46] 2026-01-09 04:46:13,780 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:46:46] 2026-01-09 04:46:13,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:46:46] 2026-01-09 04:46:13,787 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:46:46] 2026-01-09 04:46:13,788 | INFO     | sum of square deviations: 12187409905.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,792 | INFO     | sum of deviations: 189949403253.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,792 | INFO     | mean x: 1767923583.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,792 | INFO     | mean y: 2428571.8911764706
[2026-01-09 05:46:46] 2026-01-09 04:46:13,792 | INFO     | intersect: -27551910890.00241
[2026-01-09 05:46:46] 2026-01-09 04:46:13,793 | INFO     | chi2: 7.400287996638212
[2026-01-09 05:46:46] 2026-01-09 04:46:13,794 | INFO     | sum of square deviations: 11657595320.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,797 | INFO     | sum of deviations: 210473418814.99997
[2026-01-09 05:46:46] 2026-01-09 04:46:13,797 | INFO     | mean x: 1767923431.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,798 | INFO     | mean y: 2434398.370149254
[2026-01-09 05:46:46] 2026-01-09 04:46:13,798 | INFO     | intersect: -31916746059.655453
[2026-01-09 05:46:46] 2026-01-09 04:46:13,798 | INFO     | chi2: 6.590047473282433
[2026-01-09 05:46:46] 2026-01-09 04:46:13,798 | INFO     | current chi2=6.590047473282433 (change=10.948770152240737 %)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,799 | INFO     | right removable region: 334
[2026-01-09 05:46:46] 2026-01-09 04:46:13,799 | INFO     | sum of square deviations: 11657595320.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,803 | INFO     | sum of deviations: 74405745031.99997
[2026-01-09 05:46:46] 2026-01-09 04:46:13,803 | INFO     | mean x: 1767923736.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,803 | INFO     | mean y: 2461814.7552238805
[2026-01-09 05:46:46] 2026-01-09 04:46:13,803 | INFO     | intersect: -11281484756.211937
[2026-01-09 05:46:46] 2026-01-09 04:46:13,804 | INFO     | chi2: 2.840826043484284
[2026-01-09 05:46:46] 2026-01-09 04:46:13,804 | INFO     | current chi2=2.840826043484284 (change=61.61195287568797 %)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,805 | INFO     | sum of square deviations: 11143362422.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,808 | INFO     | sum of deviations: 1066694342.4999962
[2026-01-09 05:46:46] 2026-01-09 04:46:13,808 | INFO     | mean x: 1767923888.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,808 | INFO     | mean y: 2483505.1666666665
[2026-01-09 05:46:46] 2026-01-09 04:46:13,809 | INFO     | intersect: -166750370.420632
[2026-01-09 05:46:46] 2026-01-09 04:46:13,809 | INFO     | chi2: 0.9176446496630076
[2026-01-09 05:46:46] 2026-01-09 04:46:13,809 | INFO     | current chi2=0.9176446496630076 (change=67.69796405634494 %)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,810 | INFO     | sum of square deviations: 10644478650.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,813 | INFO     | sum of deviations: -1111002028.0000153
[2026-01-09 05:46:46] 2026-01-09 04:46:13,814 | INFO     | mean x: 1767924041.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,814 | INFO     | mean y: 2484144.587692308
[2026-01-09 05:46:46] 2026-01-09 04:46:13,814 | INFO     | intersect: 187008653.4419594
[2026-01-09 05:46:46] 2026-01-09 04:46:13,814 | INFO     | chi2: 0.8831756930088464
[2026-01-09 05:46:46] 2026-01-09 04:46:13,815 | INFO     | current chi2=0.8831756930088464 (change=3.756242317417698 %)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,815 | INFO     | left removable region: 30
[2026-01-09 05:46:46] 2026-01-09 04:46:13,815 | INFO     | sum of square deviations: 8711530780.0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,818 | INFO     | sum of deviations: 15186463284.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,819 | INFO     | mean x: 1767924315.5
[2026-01-09 05:46:46] 2026-01-09 04:46:13,819 | INFO     | mean y: 2493120.4967105263
[2026-01-09 05:46:46] 2026-01-09 04:46:13,819 | INFO     | intersect: -3079458649.5360126
[2026-01-09 05:46:46] 2026-01-09 04:46:13,819 | INFO     | chi2: 0.0018230467782117943
[2026-01-09 05:46:46] 2026-01-09 04:46:13,820 | INFO     | current memory leak: 1.74 B/s (using 304 data points, chi2=0.00)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | ..............................
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | . Timing measurements:
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | . get job = 0 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | . initial setup = 11 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | . payload setup = 172 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,821 | INFO     | . stage-in = 0 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,822 | INFO     | . payload execution = 20896 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,822 | INFO     | . stage-out = 1 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,822 | INFO     | . log creation = 0 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,822 | INFO     | ..............................
[2026-01-09 05:46:46] 2026-01-09 04:46:13,937 | INFO     | 
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | job summary report
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | --------------------------------------------------
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | PanDA job id: 6962922874
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | task id: 47898826
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | errors: (none)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | pilot state: finished 
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | transexitcode: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,938 | INFO     | exeerrorcode: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | exeerrordiag: 
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | exitcode: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | exitmsg: OK
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | cpuconsumptiontime: 79228 s
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | nevents: 400
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | neventsw: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | pid: 10680
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | pgrp: 10680
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | corecount: 8
[2026-01-09 05:46:46] 2026-01-09 04:46:13,939 | INFO     | event service: False
[2026-01-09 05:46:46] 2026-01-09 04:46:13,940 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 67: 2284321, 77: 2284349, 88: 2284405, 99: 2284713, 11
[2026-01-09 05:46:46] 2026-01-09 04:46:13,940 | INFO     | --------------------------------------------------
[2026-01-09 05:46:46] 2026-01-09 04:46:13,940 | INFO     | 
[2026-01-09 05:46:46] 2026-01-09 04:46:13,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 05:46:46] 2026-01-09 04:46:13,963 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,964 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,965 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | job 6962922874 has completed (purged errors)
[2026-01-09 05:46:46] 2026-01-09 04:46:13,966 | INFO     | overall cleanup function is called
[2026-01-09 05:46:46] 2026-01-09 04:46:14,975 | INFO     | --- collectZombieJob: --- 10, [10680]
[2026-01-09 05:46:46] 2026-01-09 04:46:14,975 | INFO     | zombie collector waiting for pid 10680
[2026-01-09 05:46:46] 2026-01-09 04:46:14,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:46:46] 2026-01-09 04:46:14,975 | INFO     | collected zombie processes
[2026-01-09 05:46:46] 2026-01-09 04:46:14,975 | INFO     | will attempt to kill all subprocesses of pid=10680
[2026-01-09 05:46:46] 2026-01-09 04:46:15,045 | INFO     | process IDs to be killed: [10680] (in reverse order)
[2026-01-09 05:46:46] 2026-01-09 04:46:15,088 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:46:46] 2026-01-09 04:46:15,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:46:46] 2026-01-09 04:46:15,091 | INFO     | did not find any defunct processes belonging to 10680
[2026-01-09 05:46:46] 2026-01-09 04:46:15,092 | INFO     | did not find any defunct processes belonging to 10680
[2026-01-09 05:46:46] 2026-01-09 04:46:15,093 | INFO     | ready for new job
[2026-01-09 05:46:46] 2026-01-09 04:46:15,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:46:46] 2026-01-09 04:46:15,095 | INFO     | ***************************************
[2026-01-09 05:46:46] 2026-01-09 04:46:15,095 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:46:46] 2026-01-09 04:46:15,095 | INFO     | ***************************************
[2026-01-09 05:46:46] 2026-01-09 04:46:15,095 | INFO     | 
[2026-01-09 05:46:46] 2026-01-09 04:46:15,096 | INFO     | pilot is running in a VM
[2026-01-09 05:46:46] 2026-01-09 04:46:15,096 | INFO     | architecture information:
[2026-01-09 05:46:46] 2026-01-09 04:46:15,097 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:46:46] 2026-01-09 04:46:15,114 | INFO     | cat /etc/os-release:
[2026-01-09 05:46:46] NAME="CentOS Linux"
[2026-01-09 05:46:46] VERSION="7 (Core)"
[2026-01-09 05:46:46] ID="centos"
[2026-01-09 05:46:46] ID_LIKE="rhel fedora"
[2026-01-09 05:46:46] VERSION_ID="7"
[2026-01-09 05:46:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:46:46] ANSI_COLOR="0;31"
[2026-01-09 05:46:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:46:46] HOME_URL="https://www.centos.org/"
[2026-01-09 05:46:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:46:46] 
[2026-01-09 05:46:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:46:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:46:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:46:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:46:46] 
[2026-01-09 05:46:46] 2026-01-09 04:46:15,114 | INFO     | ***************************************
[2026-01-09 05:46:46] 2026-01-09 04:46:15,618 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 05:46:46] 2026-01-09 04:46:15,637 | INFO     | sufficient remaining disk space (498021171200 B)
[2026-01-09 05:46:46] 2026-01-09 04:46:15,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:46:46] 2026-01-09 04:46:15,638 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:46:46] 2026-01-09 04:46:15,638 | INFO     | update_server=False
[2026-01-09 05:46:46] 2026-01-09 04:46:15,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:46:46] 2026-01-09 04:46:15,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:46:46] 2026-01-09 04:46:15,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:46:46] 2026-01-09 04:46:15,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:46:46] 2026-01-09 04:46:15,639 | INFO     | aborting loop
[2026-01-09 05:46:46] 2026-01-09 04:46:16,298 | INFO     | all job control threads have been joined
[2026-01-09 05:46:46] 2026-01-09 04:46:16,497 | INFO     | all payload control threads have been joined
[2026-01-09 05:46:46] 2026-01-09 04:46:16,643 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:16,644 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:16,645 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:16,696 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:16,737 | INFO     | all data control threads have been joined
[2026-01-09 05:46:46] 2026-01-09 04:46:17,200 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,303 | INFO     | [job] control thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,388 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,407 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,497 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,502 | INFO     | [payload] control thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,558 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,644 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:17,743 | INFO     | [data] control thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:18,145 | INFO     | [job] validate thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:19,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:46:46] 2026-01-09 04:46:23,090 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:26,104 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:46:46] 2026-01-09 04:46:27,110 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:46:46] 2026-01-09 04:46:37,059 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:46:46] 2026-01-09 04:46:38,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884186380096)>', '<ExcThread(monitor, started 139883595167488)>']
[2026-01-09 05:46:46] 2026-01-09 04:46:43,218 | INFO     | all workflow threads have been joined
[2026-01-09 05:46:46] 2026-01-09 04:46:43,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:46:46] 2026-01-09 04:46:43,219 | INFO     | traces error code: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:43,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:46:46] 2026-01-09 04:46:45,671 | INFO     | PID=4178 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 05:46:46] 2026-01-09 04:46:45,671 | INFO     | .. there are 2 such processes running
[2026-01-09 05:46:46] 2026-01-09 04:46:45,672 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:46:46] 2026-01-09 04:46:45,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:46:46] 2026-01-09 04:46:45,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:46:46] 2026-01-09 04:46:45,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:46:46] 2026-01-09 04:46:45,672 | INFO     | [monitor] control thread has ended
[2026-01-09 05:46:46] 2026-01-09 04:46:45,798 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:46:46] 2026-01-09 04:46:45,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:46:46] 2026-01-09 04:46:45,805 [wrapper] pilotpid: 4178
[2026-01-09 05:46:46] 2026-01-09 04:46:45,809 [wrapper] Pilot exit status: 0
[2026-01-09 05:46:46] 2026-01-09 04:46:45,825 [wrapper] pandaids: 6962922874
[2026-01-09 05:46:46] 2026-01-09 04:46:45,859 [wrapper] cleanup supervisor_pilot  9894 4179
[2026-01-09 05:46:46] 2026-01-09 04:46:45,863 [wrapper] Test setup, not cleaning
[2026-01-09 05:46:46] 2026-01-09 04:46:45,867 [wrapper] apfmon messages muted
[2026-01-09 05:46:46] 2026-01-09 04:46:45,870 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:46:46] 2026-01-09 04:46:45,874 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:46:46]  *** Error codes and diagnostics ***
[2026-01-09 05:46:46]     "exeErrorCode": 0,
[2026-01-09 05:46:46]     "exeErrorDiag": "",
[2026-01-09 05:46:46]     "pilotErrorCode": 0,
[2026-01-09 05:46:46]     "pilotErrorDiag": "",
[2026-01-09 05:46:46]  *** Listing of results directory ***
[2026-01-09 05:46:46] total 435404
[2026-01-09 05:46:46] -rwx------. 1 boinc boinc     36322 Jan  8 09:20 runpilot2-wrapper.sh
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:46:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:46 run_atlas
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:46 job.xml
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc      6390 Jan  8 23:46 init_data.xml
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc 221704210 Jan  8 23:46 EVNT.47898824._000857.pool.root.1
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:46 start_atlas.sh
[2026-01-09 05:46:46] drwxrwx--x. 2 boinc boinc        68 Jan  8 23:46 shared
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc    592402 Jan  8 23:46 input.tar.gz
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:46 boinc_lockfile
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc      2518 Jan  8 23:46 pandaJob.out
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc    989837 Jan  8 23:50 agis_schedconf.cvmfs.json
[2026-01-09 05:46:46] drwx------. 5 boinc boinc      4096 Jan  8 23:51 pilot3
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc 213467577 Jan  9 05:45 HITS.47898826._022234.pool.root.1
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc       531 Jan  9 05:45 boinc_task_state.xml
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc      1013 Jan  9 05:45 memory_monitor_summary.json
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc   1516240 Jan  9 05:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc    545707 Jan  9 05:46 log.47898826._022234.job.log.tgz.1
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc      7776 Jan  9 05:46 heartbeat.json
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:46 boinc_mmap_file
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:46 wrapper_checkpoint.txt
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc        95 Jan  9 05:46 pilot_heartbeat.json
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc       819 Jan  9 05:46 pilotlog.txt
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc   2843078 Jan  9 05:46 log.47898826._022234.job.log.1
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc       357 Jan  9 05:46 output.list
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:46 runtime_log
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc   3409920 Jan  9 05:46 result.tar.gz
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc      8833 Jan  9 05:46 runtime_log.err
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc       657 Jan  9 05:46 iZ6NDmUR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDteKDma5h4Ln.diag
[2026-01-09 05:46:46] -rw-r--r--. 1 boinc boinc     20749 Jan  9 05:46 stderr.txt
[2026-01-09 05:46:46] HITS file was successfully produced:
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc 213467577 Jan  9 05:45 shared/HITS.pool.root.1
[2026-01-09 05:46:46]  *** Contents of shared directory: ***
[2026-01-09 05:46:46] total 428908
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc 221704210 Jan  8 23:46 ATLAS.root_0
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:46 start_atlas.sh
[2026-01-09 05:46:46] -rw-r--r--. 2 boinc boinc    592402 Jan  8 23:46 input.tar.gz
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc 213467577 Jan  9 05:45 HITS.pool.root.1
[2026-01-09 05:46:46] -rw-------. 1 boinc boinc   3409920 Jan  9 05:46 result.tar.gz
05:46:47 (377): run_atlas exited; CPU time 79441.719071
05:46:47 (377): called boinc_finish(0)

</stderr_txt>
]]>

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