Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:00:59 (810455): wrapper (7.7.26015): starting
20:00:59 (810455): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 20:00:59] Arguments: --nthreads 4
[2026-01-08 20:00:59] Threads: 4
[2026-01-08 20:00:59] Checking for CVMFS
[2026-01-08 20:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 20:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 20:00:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 20:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 20:00:59] 2.12.7.0 702796 560 62320 154916 1 57 3669507 4097025 0 130560 0 331101 99.983 24639 29901 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-08 20:00:59] CVMFS is ok
[2026-01-08 20:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 20:00:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 20:00:59] Further information can be found at the LHC@home message board.
[2026-01-08 20:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 20:00:59] Checking for apptainer binary...
[2026-01-08 20:00:59] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-08 20:00:59] apptainer is not installed, using version from CVMFS
[2026-01-08 20:00:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 20:00:59] pckeatlas05
[2026-01-08 20:00:59] apptainer works
[2026-01-08 20:00:59] Set ATHENA_PROC_NUMBER=4
[2026-01-08 20:00:59] Set ATHENA_CORE_NUMBER=4
[2026-01-08 20:00:59] Starting ATLAS job with PandaID=6962922779
[2026-01-08 20:00:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:15:30]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:15:30] 2026-01-08 22:14:25,229 | INFO     | total number of processed events: 400 (read)
[2026-01-08 23:15:30] 2026-01-08 22:14:25,230 | INFO     | executing command: lscpu
[2026-01-08 23:15:30] 2026-01-08 22:14:25,238 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 23:15:30] 2026-01-08 22:14:25,740 | INFO     | time since job start (11601s) is within the limit (174528.0s)
[2026-01-08 23:15:30] 2026-01-08 22:14:27,577 | INFO     | monitor loop #882: job 0:6962922779 is in state 'finished'
[2026-01-08 23:15:30] 2026-01-08 22:14:27,578 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 23:15:30] 2026-01-08 22:14:27,743 | INFO     | time since job start (11603s) is within the limit (174528.0s)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,187 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 23:15:30] 2026-01-08 22:14:28,188 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3799.45925
[2026-01-08 23:15:30] 2026-01-08 22:14:28,189 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6962922779/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,189 | INFO     | extracted standard info from prmon json
[2026-01-08 23:15:30] 2026-01-08 22:14:28,189 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:15:30] 2026-01-08 22:14:28,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:15:30] 2026-01-08 22:14:28,189 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:15:30] 2026-01-08 22:14:28,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:15:30] 2026-01-08 22:14:28,191 | INFO     | fitting pss+swap vs Time
[2026-01-08 23:15:30] 2026-01-08 22:14:28,192 | INFO     | sum of square deviations: 2126802667.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,192 | INFO     | sum of deviations: 18027668123.000008
[2026-01-08 23:15:30] 2026-01-08 22:14:28,193 | INFO     | mean x: 1767904647.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,193 | INFO     | mean y: 2377857.747368421
[2026-01-08 23:15:30] 2026-01-08 22:14:28,193 | INFO     | intersect: -14983120677.339134
[2026-01-08 23:15:30] 2026-01-08 22:14:28,193 | INFO     | chi2: 1.0732463208503422
[2026-01-08 23:15:30] 2026-01-08 22:14:28,193 | INFO     | sum of square deviations: 1963274020.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | sum of deviations: 17156730253.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | mean x: 1767904495.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | mean y: 2377045.362162162
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | intersect: -15447050912.626701
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | chi2: 1.0738197131052352
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | current chi2=1.0738197131052352 (change=-0.05342596976606847 %)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | right removable region: 184
[2026-01-08 23:15:30] 2026-01-08 22:14:28,194 | INFO     | sum of square deviations: 1963274020.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | sum of deviations: 7277354045.999999
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | mean x: 1767904800.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | mean y: 2387549.2594594597
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | intersect: -6550782827.447721
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | chi2: 0.0020905147392631224
[2026-01-08 23:15:30] 2026-01-08 22:14:28,195 | INFO     | current chi2=0.0020905147392631224 (change=99.80521575535364 %)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,196 | INFO     | sum of square deviations: 1808350185.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,196 | INFO     | sum of deviations: 6164231841.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,196 | INFO     | mean x: 1767904952.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,196 | INFO     | mean y: 2388642.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,196 | INFO     | intersect: -6023975106.323402
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | chi2: 0.0016924534862333047
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | current chi2=0.0016924534862333047 (change=19.04130334762092 %)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | left removable region: 20
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | sum of square deviations: 1367709365.0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | sum of deviations: 4195645910.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | mean x: 1767905074.5
[2026-01-08 23:15:30] 2026-01-08 22:14:28,197 | INFO     | mean y: 2389514.8963414636
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | intersect: -5420914504.066871
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | chi2: 0.0014980064587317094
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | current memory leak: 3.07 B/s (using 164 data points, chi2=0.00)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | could have reported an average CPU frequency of 3733 MHz (10 samples)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | ..............................
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . Timing measurements:
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . get job = 0 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . initial setup = 0 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . payload setup = 3 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . stage-in = 0 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . payload execution = 11576 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,198 | INFO     | . stage-out = 0 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,199 | INFO     | . log creation = 0 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,199 | INFO     | ..............................
[2026-01-08 23:15:30] 2026-01-08 22:14:28,247 | INFO     | 
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | job summary report
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | --------------------------------------------------
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | PanDA job id: 6962922779
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | task id: 47898826
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | errors: (none)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | pilot state: finished 
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | transexitcode: 0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | exeerrorcode: 0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | exeerrordiag: 
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | exitcode: 0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | exitmsg: OK
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | cpuconsumptiontime: 44993 s
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | nevents: 400
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | neventsw: 0
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | pid: 821299
[2026-01-08 23:15:30] 2026-01-08 22:14:28,248 | INFO     | pgrp: 821299
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | corecount: 4
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | event service: False
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | sizes: {0: 2283968, 2: 2284230, 11: 2284258, 11583: 2313800, 11584: 2322798, 11586: 2322854, 11591: 2323176}
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | --------------------------------------------------
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | 
[2026-01-08 23:15:30] 2026-01-08 22:14:28,249 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | job 6962922779 has completed (purged errors)
[2026-01-08 23:15:30] 2026-01-08 22:14:28,260 | INFO     | overall cleanup function is called
[2026-01-08 23:15:30] 2026-01-08 22:14:29,266 | INFO     | --- collectZombieJob: --- 10, [821299]
[2026-01-08 23:15:30] 2026-01-08 22:14:29,266 | INFO     | zombie collector waiting for pid 821299
[2026-01-08 23:15:30] 2026-01-08 22:14:29,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:15:30] 2026-01-08 22:14:29,266 | INFO     | collected zombie processes
[2026-01-08 23:15:30] 2026-01-08 22:14:29,266 | INFO     | will attempt to kill all subprocesses of pid=821299
[2026-01-08 23:15:30] 2026-01-08 22:14:29,308 | INFO     | process IDs to be killed: [821299] (in reverse order)
[2026-01-08 23:15:30] 2026-01-08 22:14:29,327 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:15:30] 2026-01-08 22:14:29,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:15:30] 2026-01-08 22:14:29,329 | INFO     | did not find any defunct processes belonging to 821299
[2026-01-08 23:15:30] 2026-01-08 22:14:29,330 | INFO     | did not find any defunct processes belonging to 821299
[2026-01-08 23:15:30] 2026-01-08 22:14:29,330 | INFO     | ready for new job
[2026-01-08 23:15:30] 2026-01-08 22:14:29,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | ***************************************
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | ***************************************
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | 
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | architecture information:
[2026-01-08 23:15:30] 2026-01-08 22:14:29,331 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:15:30] 2026-01-08 22:14:29,337 | INFO     | cat /etc/os-release:
[2026-01-08 23:15:30] NAME="CentOS Linux"
[2026-01-08 23:15:30] VERSION="7 (Core)"
[2026-01-08 23:15:30] ID="centos"
[2026-01-08 23:15:30] ID_LIKE="rhel fedora"
[2026-01-08 23:15:30] VERSION_ID="7"
[2026-01-08 23:15:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:15:30] ANSI_COLOR="0;31"
[2026-01-08 23:15:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:15:30] HOME_URL="https://www.centos.org/"
[2026-01-08 23:15:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:15:30] 
[2026-01-08 23:15:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:15:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:15:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:15:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:15:30] 
[2026-01-08 23:15:30] 2026-01-08 22:14:29,337 | INFO     | ***************************************
[2026-01-08 23:15:30] 2026-01-08 22:14:29,840 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | INFO     | sufficient remaining disk space (43892342784 B)
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | INFO     | update_server=False
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:15:30] 2026-01-08 22:14:29,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:15:30] 2026-01-08 22:14:29,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:15:30] 2026-01-08 22:14:29,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:15:30] 2026-01-08 22:14:29,939 | INFO     | all payload control threads have been joined
[2026-01-08 23:15:30] 2026-01-08 22:14:30,078 | INFO     | all data control threads have been joined
[2026-01-08 23:15:30] 2026-01-08 22:14:30,081 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 23:15:30] 2026-01-08 22:14:30,081 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 23:15:30] 2026-01-08 22:14:30,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:15:30] 2026-01-08 22:14:30,081 | INFO     | will abort loop
[2026-01-08 23:15:30] 2026-01-08 22:14:30,669 | INFO     | all job control threads have been joined
[2026-01-08 23:15:30] 2026-01-08 22:14:30,852 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:30,853 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:30,945 | INFO     | [payload] control thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,023 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,083 | INFO     | [data] control thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,086 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,341 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,673 | INFO     | [job] control thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,759 | INFO     | [job] validate thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,827 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,851 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:31,989 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:32,203 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:32,322 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:33,853 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:14:40,721 | INFO     | job.realtimelogging is not enabled
[2026-01-08 23:15:30] 2026-01-08 22:14:41,722 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:15:30] 2026-01-08 22:15:00,889 | INFO     | PID=814121 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 23:15:30] 2026-01-08 22:15:00,889 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:15:30] 2026-01-08 22:15:00,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:15:30] 2026-01-08 22:15:00,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:15:30] 2026-01-08 22:15:22,987 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:15:30] 2026-01-08 22:15:24,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310544037696)>', '<ExcThread(monitor, started 140309719668480)>']
[2026-01-08 23:15:30] 2026-01-08 22:15:24,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:15:30] 2026-01-08 22:15:24,997 | INFO     | [monitor] control thread has ended
[2026-01-08 23:15:30] 2026-01-08 22:15:29,892 | INFO     | all workflow threads have been joined
[2026-01-08 23:15:30] 2026-01-08 22:15:29,892 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:15:30] 2026-01-08 22:15:29,892 | INFO     | traces error code: 0
[2026-01-08 23:15:30] 2026-01-08 22:15:29,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:15:30] 2026-01-08 22:15:29,981 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:15:30] 2026-01-08 22:15:29,983 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:15:30] 2026-01-08 22:15:29,984 [wrapper] pilotpid: 814121
[2026-01-08 23:15:30] 2026-01-08 22:15:29,985 [wrapper] Pilot exit status: 0
[2026-01-08 23:15:30] 2026-01-08 22:15:29,989 [wrapper] pandaids: 6962922779
[2026-01-08 23:15:30] 2026-01-08 22:15:30,005 [wrapper] cleanup supervisor_pilot  841506 814122
[2026-01-08 23:15:30] 2026-01-08 22:15:30,006 [wrapper] Test setup, not cleaning
[2026-01-08 23:15:30] 2026-01-08 22:15:30,007 [wrapper] apfmon messages muted
[2026-01-08 23:15:30] 2026-01-08 22:15:30,008 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:15:30] 2026-01-08 22:15:30,009 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:15:30]  *** Error codes and diagnostics ***
[2026-01-08 23:15:30]     "exeErrorCode": 0,
[2026-01-08 23:15:30]     "exeErrorDiag": "",
[2026-01-08 23:15:30]     "pilotErrorCode": 0,
[2026-01-08 23:15:30]     "pilotErrorDiag": "",
[2026-01-08 23:15:30]  *** Listing of results directory ***
[2026-01-08 23:15:30] total 444284
[2026-01-08 23:15:30] -rwx------ 1 boinc boinc     36322 Jan  8 09:20 runpilot2-wrapper.sh
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc       100 Jan  8 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:15:30] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 20:00 run_atlas
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc       105 Jan  8 20:00 job.xml
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc 223825144 Jan  8 20:00 EVNT.47898824._000856.pool.root.1
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc     15847 Jan  8 20:00 start_atlas.sh
[2026-01-08 23:15:30] drwxrwx--x 2 boinc boinc        68 Jan  8 20:00 shared
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc    592401 Jan  8 20:00 input.tar.gz
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc      6311 Jan  8 20:00 init_data.xml
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc         0 Jan  8 20:00 boinc_lockfile
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc      2518 Jan  8 20:00 pandaJob.out
[2026-01-08 23:15:30] -rw------- 1 boinc boinc    989829 Jan  8 20:01 agis_schedconf.cvmfs.json
[2026-01-08 23:15:30] drwx------ 5 boinc boinc      4096 Jan  8 20:01 pilot3
[2026-01-08 23:15:30] -rw------- 1 boinc boinc 223222362 Jan  8 23:13 HITS.47898826._022214.pool.root.1
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc       530 Jan  8 23:13 boinc_task_state.xml
[2026-01-08 23:15:30] -rw------- 1 boinc boinc        95 Jan  8 23:14 pilot_heartbeat.json
[2026-01-08 23:15:30] -rw------- 1 boinc boinc      1016 Jan  8 23:14 memory_monitor_summary.json
[2026-01-08 23:15:30] -rw------- 1 boinc boinc   1516240 Jan  8 23:14 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:15:30] -rw------- 1 boinc boinc    362385 Jan  8 23:14 log.47898826._022214.job.log.tgz.1
[2026-01-08 23:15:30] -rw------- 1 boinc boinc      7764 Jan  8 23:14 heartbeat.json
[2026-01-08 23:15:30] -rw------- 1 boinc boinc      5005 Jan  8 23:15 pilotlog.txt
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc      8192 Jan  8 23:15 boinc_mmap_file
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc        28 Jan  8 23:15 wrapper_checkpoint.txt
[2026-01-08 23:15:30] -rw------- 1 boinc boinc   1639923 Jan  8 23:15 log.47898826._022214.job.log.1
[2026-01-08 23:15:30] -rw------- 1 boinc boinc       357 Jan  8 23:15 output.list
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc       620 Jan  8 23:15 runtime_log
[2026-01-08 23:15:30] -rw------- 1 boinc boinc   2017280 Jan  8 23:15 result.tar.gz
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc      8831 Jan  8 23:15 runtime_log.err
[2026-01-08 23:15:30] -rw------- 1 boinc boinc       653 Jan  8 23:15 rCgNDmUR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvseKDmsEASsn.diag
[2026-01-08 23:15:30] -rw-r--r-- 1 boinc boinc     21395 Jan  8 23:15 stderr.txt
[2026-01-08 23:15:30] HITS file was successfully produced:
[2026-01-08 23:15:30] -rw------- 1 boinc boinc 223222362 Jan  8 23:13 shared/HITS.pool.root.1
[2026-01-08 23:15:30]  *** Contents of shared directory: ***
[2026-01-08 23:15:30] total 439140
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc 223825144 Jan  8 20:00 ATLAS.root_0
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc     15847 Jan  8 20:00 start_atlas.sh
[2026-01-08 23:15:30] -rw-r--r-- 2 boinc boinc    592401 Jan  8 20:00 input.tar.gz
[2026-01-08 23:15:30] -rw------- 1 boinc boinc 223222362 Jan  8 23:13 HITS.pool.root.1
[2026-01-08 23:15:30] -rw------- 1 boinc boinc   2017280 Jan  8 23:15 result.tar.gz
23:15:31 (810455): run_atlas exited; CPU time 45067.264000
23:15:31 (810455): called boinc_finish(0)

</stderr_txt>
]]>

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