Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:32 (2859620): wrapper (7.7.26015): starting
12:29:32 (2859620): wrapper: running run_atlas (--nthreads 9)
[2026-01-08 12:29:32] Arguments: --nthreads 9
[2026-01-08 12:29:32] Threads: 9
[2026-01-08 12:29:32] Checking for CVMFS
[2026-01-08 12:29:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:29:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:29:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:29:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:29:35] 2.13.3.0 5206 69359 749580 154915 1 474 37683204 40960001 50455 16776704 0 619898934 99.810 302778254 29852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-08 12:29:35] CVMFS is ok
[2026-01-08 12:29:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:29:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:29:35] Further information can be found at the LHC@home message board.
[2026-01-08 12:29:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:29:35] Checking for apptainer binary...
[2026-01-08 12:29:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:29:35] Running /usr/bin/apptainer --version
[2026-01-08 12:29:35] apptainer version 1.4.5-2.el9
[2026-01-08 12:29:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:29:36] lc-12-9.aglt2.org
[2026-01-08 12:29:36] apptainer works
[2026-01-08 12:29:36] Set ATHENA_PROC_NUMBER=9
[2026-01-08 12:29:36] Set ATHENA_CORE_NUMBER=9
[2026-01-08 12:29:36] Starting ATLAS job with PandaID=6962930965
[2026-01-08 12:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:11:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:11:07] 2026-01-08 21:09:57,729 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:11:07] 2026-01-08 21:09:57,729 | INFO     | sum of square deviations: 2996206934.6291046
[2026-01-08 16:11:07] 2026-01-08 21:09:57,731 | INFO     | sum of deviations: 80572954949.66206
[2026-01-08 16:11:07] 2026-01-08 21:09:57,731 | INFO     | mean x: 1767900049.2206573
[2026-01-08 16:11:07] 2026-01-08 21:09:57,731 | INFO     | mean y: 2620520.9859154928
[2026-01-08 16:11:07] 2026-01-08 21:09:57,731 | INFO     | intersect: -47539132812.21448
[2026-01-08 16:11:07] 2026-01-08 21:09:57,738 | INFO     | chi2: 13.499368772999771
[2026-01-08 16:11:07] 2026-01-08 21:09:57,738 | INFO     | sum of square deviations: 2790180037.0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,740 | INFO     | sum of deviations: 146760119322.25
[2026-01-08 16:11:07] 2026-01-08 21:09:57,740 | INFO     | mean x: 1767899896.75
[2026-01-08 16:11:07] 2026-01-08 21:09:57,740 | INFO     | mean y: 2669535.889423077
[2026-01-08 16:11:07] 2026-01-08 21:09:57,740 | INFO     | intersect: -92986742027.5994
[2026-01-08 16:11:07] 2026-01-08 21:09:57,741 | INFO     | chi2: 10.056334833576033
[2026-01-08 16:11:07] 2026-01-08 21:09:57,741 | INFO     | current chi2=10.056334833576033 (change=25.50514766520185 %)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,741 | INFO     | sum of square deviations: 2593827738.9950657
[2026-01-08 16:11:07] 2026-01-08 21:09:57,746 | INFO     | sum of deviations: 184478585584.45807
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | mean x: 1767899744.2807882
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | mean y: 2698674.8866995075
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | intersect: -125734118530.40779
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | chi2: 8.635905494141484
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | current chi2=8.635905494141484 (change=14.12472200798274 %)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,747 | INFO     | right removable region: 202
[2026-01-08 16:11:07] 2026-01-08 21:09:57,748 | INFO     | sum of square deviations: 2790021437.0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,755 | INFO     | sum of deviations: 4930922623.250046
[2026-01-08 16:11:07] 2026-01-08 21:09:57,755 | INFO     | mean x: 1767900201.75
[2026-01-08 16:11:07] 2026-01-08 21:09:57,756 | INFO     | mean y: 2676424.043269231
[2026-01-08 16:11:07] 2026-01-08 21:09:57,756 | INFO     | intersect: -3121808207.096644
[2026-01-08 16:11:07] 2026-01-08 21:09:57,756 | INFO     | chi2: 9.134168779115162
[2026-01-08 16:11:07] 2026-01-08 21:09:57,756 | INFO     | current chi2=9.134168779115162 (change=32.33632673711004 %)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,757 | INFO     | sum of square deviations: 2593510538.9950657
[2026-01-08 16:11:07] 2026-01-08 21:09:57,758 | INFO     | sum of deviations: -57048958685.33988
[2026-01-08 16:11:07] 2026-01-08 21:09:57,758 | INFO     | mean x: 1767900354.2807882
[2026-01-08 16:11:07] 2026-01-08 21:09:57,758 | INFO     | mean y: 2724500.3743842365
[2026-01-08 16:11:07] 2026-01-08 21:09:57,758 | INFO     | intersect: 38890892778.35735
[2026-01-08 16:11:07] 2026-01-08 21:09:57,759 | INFO     | chi2: 6.372692077363085
[2026-01-08 16:11:07] 2026-01-08 21:09:57,759 | INFO     | current chi2=6.372692077363085 (change=30.23238094818284 %)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,759 | INFO     | sum of square deviations: 2406478341.919205
[2026-01-08 16:11:07] 2026-01-08 21:09:57,761 | INFO     | sum of deviations: -82350477856.35352
[2026-01-08 16:11:07] 2026-01-08 21:09:57,761 | INFO     | mean x: 1767900506.7979798
[2026-01-08 16:11:07] 2026-01-08 21:09:57,761 | INFO     | mean y: 2744964.616161616
[2026-01-08 16:11:07] 2026-01-08 21:09:57,761 | INFO     | intersect: 60500879936.89889
[2026-01-08 16:11:07] 2026-01-08 21:09:57,762 | INFO     | chi2: 5.72034720108953
[2026-01-08 16:11:07] 2026-01-08 21:09:57,762 | INFO     | current chi2=5.72034720108953 (change=10.236566718652504 %)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,762 | INFO     | left removable region: 30
[2026-01-08 16:11:07] 2026-01-08 21:09:57,762 | INFO     | sum of square deviations: 1577449310.5116236
[2026-01-08 16:11:07] 2026-01-08 21:09:57,764 | INFO     | sum of deviations: 10168457491.534885
[2026-01-08 16:11:07] 2026-01-08 21:09:57,764 | INFO     | mean x: 1767900628.9069767
[2026-01-08 16:11:07] 2026-01-08 21:09:57,764 | INFO     | mean y: 2857863.4709302327
[2026-01-08 16:11:07] 2026-01-08 21:09:57,764 | INFO     | intersect: -11393275295.614767
[2026-01-08 16:11:07] 2026-01-08 21:09:57,764 | INFO     | chi2: 0.5503802873781592
[2026-01-08 16:11:07] 2026-01-08 21:09:57,765 | INFO     | current memory leak: 6.45 B/s (using 172 data points, chi2=0.55)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,765 | INFO     | could have reported an average CPU frequency of 2708 MHz (11 samples)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,765 | INFO     | ..............................
[2026-01-08 16:11:07] 2026-01-08 21:09:57,765 | INFO     | . Timing measurements:
[2026-01-08 16:11:07] 2026-01-08 21:09:57,765 | INFO     | . get job = 0 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . initial setup = 5 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . payload setup = 45 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . stage-in = 0 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . payload execution = 13001 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . stage-out = 5 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | . log creation = 1 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,766 | INFO     | ..............................
[2026-01-08 16:11:07] 2026-01-08 21:09:57,871 | INFO     | time since job start (13159s) is within the limit (174528.0s)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | job summary report
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | --------------------------------------------------
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | PanDA job id: 6962930965
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | task id: 47961985
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | errors: (none)
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | pilot state: finished 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | transexitcode: 0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | exeerrorcode: 0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | exeerrordiag: 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | exitcode: 0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | exitmsg: OK
[2026-01-08 16:11:07] 2026-01-08 21:09:57,942 | INFO     | cpuconsumptiontime: 54051 s
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | nevents: 150
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | neventsw: 0
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | pid: 2933047
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | pgrp: 2933047
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | corecount: 9
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | event service: False
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | sizes: {0: 2283720, 1: 2284405, 2: 2284433, 3: 2284604, 15: 2284632, 26: 2284660, 34: 2285078, 37: 2285106, 13051: 2315738, 13058: 2324732, 13059: 2324788, 13093: 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | --------------------------------------------------
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | 
[2026-01-08 16:11:07] 2026-01-08 21:09:57,943 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-08 16:11:07] 2026-01-08 21:09:58,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,030 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:11:07] 2026-01-08 21:09:58,031 | INFO     | job 6962930965 has completed (purged errors)
[2026-01-08 16:11:07] 2026-01-08 21:09:58,031 | INFO     | overall cleanup function is called
[2026-01-08 16:11:07] 2026-01-08 21:09:59,084 | INFO     | --- collectZombieJob: --- 10, [2933047]
[2026-01-08 16:11:07] 2026-01-08 21:09:59,084 | INFO     | zombie collector waiting for pid 2933047
[2026-01-08 16:11:07] 2026-01-08 21:09:59,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:11:07] 2026-01-08 21:09:59,084 | INFO     | collected zombie processes
[2026-01-08 16:11:07] 2026-01-08 21:09:59,084 | INFO     | will attempt to kill all subprocesses of pid=2933047
[2026-01-08 16:11:07] 2026-01-08 21:10:02,560 | INFO     | PID=2886044 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:11:07] 2026-01-08 21:10:02,560 | INFO     | .. there are 82 such processes running
[2026-01-08 16:11:07] 2026-01-08 21:10:02,601 | INFO     | process IDs to be killed: [2933047] (in reverse order)
[2026-01-08 16:11:07] 2026-01-08 21:10:03,250 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:11:07] 2026-01-08 21:10:03,251 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:11:07] 2026-01-08 21:10:03,354 | INFO     | did not find any defunct processes belonging to 2933047
[2026-01-08 16:11:07] 2026-01-08 21:10:03,380 | INFO     | did not find any defunct processes belonging to 2933047
[2026-01-08 16:11:07] 2026-01-08 21:10:03,381 | INFO     | ready for new job
[2026-01-08 16:11:07] 2026-01-08 21:10:03,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:11:07] 2026-01-08 21:10:03,382 | INFO     | ***************************************
[2026-01-08 16:11:07] 2026-01-08 21:10:03,383 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:11:07] 2026-01-08 21:10:03,383 | INFO     | ***************************************
[2026-01-08 16:11:07] 2026-01-08 21:10:03,383 | INFO     | 
[2026-01-08 16:11:07] 2026-01-08 21:10:03,388 | INFO     | architecture information:
[2026-01-08 16:11:07] 2026-01-08 21:10:03,391 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:11:07] 2026-01-08 21:10:03,561 | INFO     | cat /etc/os-release:
[2026-01-08 16:11:07] NAME="CentOS Linux"
[2026-01-08 16:11:07] VERSION="7 (Core)"
[2026-01-08 16:11:07] ID="centos"
[2026-01-08 16:11:07] ID_LIKE="rhel fedora"
[2026-01-08 16:11:07] VERSION_ID="7"
[2026-01-08 16:11:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:11:07] ANSI_COLOR="0;31"
[2026-01-08 16:11:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:11:07] HOME_URL="https://www.centos.org/"
[2026-01-08 16:11:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:11:07] 
[2026-01-08 16:11:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:11:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:11:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:11:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:11:07] 
[2026-01-08 16:11:07] 2026-01-08 21:10:03,561 | INFO     | ***************************************
[2026-01-08 16:11:07] 2026-01-08 21:10:04,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-08 16:11:07] 2026-01-08 21:10:04,227 | INFO     | sufficient remaining disk space (403430178816 B)
[2026-01-08 16:11:07] 2026-01-08 21:10:04,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:11:07] 2026-01-08 21:10:04,228 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:11:07] 2026-01-08 21:10:04,228 | INFO     | update_server=False
[2026-01-08 16:11:07] 2026-01-08 21:10:04,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:11:07] 2026-01-08 21:10:04,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:11:07] 2026-01-08 21:10:04,234 | INFO     | aborting loop
[2026-01-08 16:11:07] 2026-01-08 21:10:04,235 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:11:07] 2026-01-08 21:10:04,246 | INFO     | all payload control threads have been joined
[2026-01-08 16:11:07] 2026-01-08 21:10:05,234 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,242 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,251 | INFO     | [payload] control thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,294 | INFO     | all data control threads have been joined
[2026-01-08 16:11:07] 2026-01-08 21:10:05,482 | INFO     | all job control threads have been joined
[2026-01-08 16:11:07] 2026-01-08 21:10:05,570 | INFO     | [job] validate thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,570 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,624 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,668 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:05,738 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,000 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:11:07] 2026-01-08 21:10:06,244 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,300 | INFO     | [data] control thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,488 | INFO     | [job] control thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,692 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:06,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:11:07] 2026-01-08 21:10:07,992 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:10,020 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:11:07] 2026-01-08 21:10:37,231 | INFO     | PID=2886044 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 16:11:07] 2026-01-08 21:10:37,231 | INFO     | .. there are 82 such processes running
[2026-01-08 16:11:07] 2026-01-08 21:10:37,245 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:11:07] 2026-01-08 21:10:37,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:11:07] 2026-01-08 21:10:37,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:11:07] 2026-01-08 21:11:01,321 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:11:07] 2026-01-08 21:11:01,575 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950221760320)>', '<ExcThread(monitor, started 139949856761600)>']
[2026-01-08 16:11:07] 2026-01-08 21:11:02,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:11:07] 2026-01-08 21:11:02,398 | INFO     | [monitor] control thread has ended
[2026-01-08 16:11:07] 2026-01-08 21:11:06,600 | INFO     | all workflow threads have been joined
[2026-01-08 16:11:07] 2026-01-08 21:11:06,600 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:11:07] 2026-01-08 21:11:06,600 | INFO     | traces error code: 0
[2026-01-08 16:11:07] 2026-01-08 21:11:06,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:11:07] 2026-01-08 21:11:06,886 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:11:07] 2026-01-08 21:11:06,900 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:11:07] 2026-01-08 21:11:06,903 [wrapper] pilotpid: 2886044
[2026-01-08 16:11:07] 2026-01-08 21:11:06,906 [wrapper] Pilot exit status: 0
[2026-01-08 16:11:07] 2026-01-08 21:11:06,987 [wrapper] pandaids: 6962930965
[2026-01-08 16:11:07] 2026-01-08 21:11:07,252 [wrapper] cleanup supervisor_pilot  865896 2886045
[2026-01-08 16:11:07] 2026-01-08 21:11:07,263 [wrapper] Test setup, not cleaning
[2026-01-08 16:11:07] 2026-01-08 21:11:07,295 [wrapper] apfmon messages muted
[2026-01-08 16:11:07] 2026-01-08 21:11:07,308 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:11:07] 2026-01-08 21:11:07,345 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:11:07]  *** Error codes and diagnostics ***
[2026-01-08 16:11:07]     "exeErrorCode": 0,
[2026-01-08 16:11:07]     "exeErrorDiag": "",
[2026-01-08 16:11:07]     "pilotErrorCode": 0,
[2026-01-08 16:11:07]     "pilotErrorDiag": "",
[2026-01-08 16:11:07]  *** Listing of results directory ***
[2026-01-08 16:11:07] total 562040
[2026-01-08 16:11:07] -rwx------. 1 boincer umatlas     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:23 queuedata.json
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas       100 Jan  8 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:11:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  8 12:29 run_atlas
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas       105 Jan  8 12:29 job.xml
[2026-01-08 16:11:07] -rw-r--r--. 2 boincer umatlas 413081581 Jan  8 12:29 EVNT.47961981._000020.pool.root.1
[2026-01-08 16:11:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:29 start_atlas.sh
[2026-01-08 16:11:07] drwxrwx--x. 2 boincer umatlas        68 Jan  8 12:29 shared
[2026-01-08 16:11:07] -rw-r--r--. 2 boincer umatlas    592606 Jan  8 12:29 input.tar.gz
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas         0 Jan  8 12:29 boinc_lockfile
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas      2875 Jan  8 12:29 pandaJob.out
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas    989837 Jan  8 12:30 agis_schedconf.cvmfs.json
[2026-01-08 16:11:07] drwx------. 5 boincer umatlas      4096 Jan  8 12:30 pilot3
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas       531 Jan  8 15:49 boinc_task_state.xml
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas      6798 Jan  8 16:01 init_data.xml
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas 152555526 Jan  8 16:08 HITS.47961985._000337.pool.root.1
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas      1050 Jan  8 16:09 memory_monitor_summary.json
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas   1516240 Jan  8 16:09 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas   1426203 Jan  8 16:09 log.47961985._000337.job.log.tgz.1
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas      8596 Jan  8 16:09 heartbeat.json
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas        95 Jan  8 16:10 pilot_heartbeat.json
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 16:10 boinc_mmap_file
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas        28 Jan  8 16:10 wrapper_checkpoint.txt
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas      4825 Jan  8 16:11 pilotlog.txt
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas   1569405 Jan  8 16:11 log.47961985._000337.job.log.1
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas       353 Jan  8 16:11 output.list
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas       620 Jan  8 16:11 runtime_log
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas   3010560 Jan  8 16:11 result.tar.gz
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas      8813 Jan  8 16:11 runtime_log.err
[2026-01-08 16:11:07] -rw-------. 1 boincer umatlas       657 Jan  8 16:11 IF1NDmhR0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9ueKDmXyq2vn.diag
[2026-01-08 16:11:07] -rw-r--r--. 1 boincer umatlas     21159 Jan  8 16:11 stderr.txt
[2026-01-08 16:11:08] HITS file was successfully produced:
[2026-01-08 16:11:08] -rw-------. 1 boincer umatlas 152555526 Jan  8 16:08 shared/HITS.pool.root.1
[2026-01-08 16:11:08]  *** Contents of shared directory: ***
[2026-01-08 16:11:08] total 555920
[2026-01-08 16:11:08] -rw-r--r--. 2 boincer umatlas 413081581 Jan  8 12:29 ATLAS.root_0
[2026-01-08 16:11:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  8 12:29 start_atlas.sh
[2026-01-08 16:11:08] -rw-r--r--. 2 boincer umatlas    592606 Jan  8 12:29 input.tar.gz
[2026-01-08 16:11:08] -rw-------. 1 boincer umatlas 152555526 Jan  8 16:08 HITS.pool.root.1
[2026-01-08 16:11:08] -rw-------. 1 boincer umatlas   3010560 Jan  8 16:11 result.tar.gz
16:11:09 (2859620): run_atlas exited; CPU time 54612.278111
16:11:09 (2859620): called boinc_finish(0)

</stderr_txt>
]]>

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