Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:52:48 (25750): wrapper (7.7.26015): starting
11:52:48 (25750): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:52:48] Arguments: --nthreads 8
[2026-01-08 11:52:48] Threads: 8
[2026-01-08 11:52:48] Checking for CVMFS
[2026-01-08 11:52:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:52:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:52:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:52:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:52:48] 2.11.2.0 2888 111049 108192 154914 1 57 18147458 20275200 1 130560 0 22867506 99.766 7610937 32358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 11:52:48] CVMFS is ok
[2026-01-08 11:52:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:52:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:52:48] Further information can be found at the LHC@home message board.
[2026-01-08 11:52:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:52:48] Checking for apptainer binary...
[2026-01-08 11:52:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:52:48] Running /usr/bin/apptainer --version
[2026-01-08 11:52:48] apptainer version 1.3.2-1.el7
[2026-01-08 11:52:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:52:50] c-204-6.aglt2.org
[2026-01-08 11:52:50] apptainer works
[2026-01-08 11:52:50] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:52:50] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:52:50] Starting ATLAS job with PandaID=6962920251
[2026-01-08 11:52:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:55:49]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:55:49] 2026-01-08 19:55:14,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,670 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 14:55:49] 2026-01-08 19:55:15,671 | INFO     | time since job start (10926s) is within the limit (174528.0s)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,675 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-08 14:55:49] 2026-01-08 19:55:15,678 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962920251/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,679 | INFO     | extracted standard info from prmon json
[2026-01-08 14:55:49] 2026-01-08 19:55:15,680 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:55:49] 2026-01-08 19:55:15,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:55:49] 2026-01-08 19:55:15,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:55:49] 2026-01-08 19:55:15,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:55:49] 2026-01-08 19:55:15,685 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:55:49] 2026-01-08 19:55:15,685 | INFO     | sum of square deviations: 1778377530.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,686 | INFO     | sum of deviations: 262504959.9999962
[2026-01-08 14:55:49] 2026-01-08 19:55:15,686 | INFO     | mean x: 1767896650.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,687 | INFO     | mean y: 2500457.156424581
[2026-01-08 14:55:49] 2026-01-08 19:55:15,687 | INFO     | intersect: -258457428.0865234
[2026-01-08 14:55:49] 2026-01-08 19:55:15,687 | INFO     | chi2: 2.2891305027912727
[2026-01-08 14:55:49] 2026-01-08 19:55:15,687 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 14:55:49] 2026-01-08 19:55:15,688 | INFO     | sum of deviations: 11922318788.999996
[2026-01-08 14:55:49] 2026-01-08 19:55:15,689 | INFO     | mean x: 1767896497.5
[2026-01-08 14:55:49] 2026-01-08 19:55:15,689 | INFO     | mean y: 2512444.7586206896
[2026-01-08 14:55:49] 2026-01-08 19:55:15,689 | INFO     | intersect: -12900934531.20493
[2026-01-08 14:55:49] 2026-01-08 19:55:15,689 | INFO     | chi2: 1.5255182777584306
[2026-01-08 14:55:49] 2026-01-08 19:55:15,689 | INFO     | current chi2=1.5255182777584306 (change=33.358177880279186 %)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,690 | INFO     | sum of square deviations: 1496660620.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,691 | INFO     | sum of deviations: 11490159836.000002
[2026-01-08 14:55:49] 2026-01-08 19:55:15,691 | INFO     | mean x: 1767896345.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,691 | INFO     | mean y: 2511962.917159763
[2026-01-08 14:55:49] 2026-01-08 19:55:15,691 | INFO     | intersect: -13569978223.622393
[2026-01-08 14:55:49] 2026-01-08 19:55:15,692 | INFO     | chi2: 1.5266230817591955
[2026-01-08 14:55:49] 2026-01-08 19:55:15,692 | INFO     | current chi2=1.5266230817591955 (change=-0.0724215512113186 %)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,692 | INFO     | right removable region: 168
[2026-01-08 14:55:49] 2026-01-08 19:55:15,692 | INFO     | sum of square deviations: 1633472487.5
[2026-01-08 14:55:49] 2026-01-08 19:55:15,693 | INFO     | sum of deviations: -25352712030.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,693 | INFO     | mean x: 1767896802.5
[2026-01-08 14:55:49] 2026-01-08 19:55:15,693 | INFO     | mean y: 2527044.9310344825
[2026-01-08 14:55:49] 2026-01-08 19:55:15,693 | INFO     | intersect: 27441604761.592167
[2026-01-08 14:55:49] 2026-01-08 19:55:15,694 | INFO     | chi2: 0.9171765825421944
[2026-01-08 14:55:49] 2026-01-08 19:55:15,694 | INFO     | current chi2=0.9171765825421944 (change=59.93340784093233 %)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,694 | INFO     | sum of square deviations: 1496660620.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,695 | INFO     | sum of deviations: -25048349175.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,695 | INFO     | mean x: 1767896955.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,695 | INFO     | mean y: 2526649.479289941
[2026-01-08 14:55:49] 2026-01-08 19:55:15,695 | INFO     | intersect: 29590330085.009823
[2026-01-08 14:55:49] 2026-01-08 19:55:15,696 | INFO     | chi2: 0.9026154160381885
[2026-01-08 14:55:49] 2026-01-08 19:55:15,696 | INFO     | current chi2=0.9026154160381885 (change=1.5876077498234613 %)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,696 | INFO     | left removable region: 20
[2026-01-08 14:55:49] 2026-01-08 19:55:15,696 | INFO     | sum of square deviations: 1005179777.0
[2026-01-08 14:55:49] 2026-01-08 19:55:15,697 | INFO     | sum of deviations: -2519607714.4999995
[2026-01-08 14:55:49] 2026-01-08 19:55:15,697 | INFO     | mean x: 1767896924.5
[2026-01-08 14:55:49] 2026-01-08 19:55:15,697 | INFO     | mean y: 2525848.4797297297
[2026-01-08 14:55:49] 2026-01-08 19:55:15,697 | INFO     | intersect: 4433978640.641329
[2026-01-08 14:55:49] 2026-01-08 19:55:15,698 | INFO     | chi2: 0.05637118104540207
[2026-01-08 14:55:49] 2026-01-08 19:55:15,698 | INFO     | current memory leak: -2.51 B/s (using 148 data points, chi2=0.06)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,698 | INFO     | could have reported an average CPU frequency of 2019 MHz (9 samples)
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | ..............................
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . Timing measurements:
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . get job = 0 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . initial setup = 2 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . payload setup = 8 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . stage-in = 0 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . payload execution = 10881 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . stage-out = 2 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,699 | INFO     | . log creation = 0 s
[2026-01-08 14:55:49] 2026-01-08 19:55:15,700 | INFO     | ..............................
[2026-01-08 14:55:49] 2026-01-08 19:55:16,285 | INFO     | 
[2026-01-08 14:55:49] 2026-01-08 19:55:16,285 | INFO     | job summary report
[2026-01-08 14:55:49] 2026-01-08 19:55:16,285 | INFO     | --------------------------------------------------
[2026-01-08 14:55:49] 2026-01-08 19:55:16,285 | INFO     | PanDA job id: 6962920251
[2026-01-08 14:55:49] 2026-01-08 19:55:16,285 | INFO     | task id: 47898826
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | errors: (none)
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | pilot state: finished 
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | transexitcode: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | exeerrorcode: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:16,286 | INFO     | exeerrordiag: 
[2026-01-08 14:55:49] 2026-01-08 19:55:16,287 | INFO     | exitcode: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:16,287 | INFO     | exitmsg: OK
[2026-01-08 14:55:49] 2026-01-08 19:55:16,287 | INFO     | cpuconsumptiontime: 81763 s
[2026-01-08 14:55:49] 2026-01-08 19:55:16,287 | INFO     | nevents: 400
[2026-01-08 14:55:49] 2026-01-08 19:55:16,287 | INFO     | neventsw: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | pid: 3508
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | pgrp: 3508
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | corecount: 8
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | event service: False
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 10894: 2313313, 10897: 2322311, 10900: 2322495, 10909: 2322753}
[2026-01-08 14:55:49] 2026-01-08 19:55:16,288 | INFO     | --------------------------------------------------
[2026-01-08 14:55:49] 2026-01-08 19:55:16,289 | INFO     | 
[2026-01-08 14:55:49] 2026-01-08 19:55:16,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 14:55:49] 2026-01-08 19:55:16,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,321 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,321 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,321 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,323 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,324 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:55:49] 2026-01-08 19:55:16,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,325 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:55:49] 2026-01-08 19:55:16,325 | INFO     | job 6962920251 has completed (purged errors)
[2026-01-08 14:55:49] 2026-01-08 19:55:16,325 | INFO     | overall cleanup function is called
[2026-01-08 14:55:49] 2026-01-08 19:55:17,334 | INFO     | --- collectZombieJob: --- 10, [3508]
[2026-01-08 14:55:49] 2026-01-08 19:55:17,334 | INFO     | zombie collector waiting for pid 3508
[2026-01-08 14:55:49] 2026-01-08 19:55:17,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:55:49] 2026-01-08 19:55:17,351 | INFO     | collected zombie processes
[2026-01-08 14:55:49] 2026-01-08 19:55:17,351 | INFO     | will attempt to kill all subprocesses of pid=3508
[2026-01-08 14:55:49] 2026-01-08 19:55:17,440 | INFO     | process IDs to be killed: [3508] (in reverse order)
[2026-01-08 14:55:49] 2026-01-08 19:55:17,496 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:55:49] 2026-01-08 19:55:17,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:55:49] 2026-01-08 19:55:17,501 | INFO     | did not find any defunct processes belonging to 3508
[2026-01-08 14:55:49] 2026-01-08 19:55:17,504 | INFO     | did not find any defunct processes belonging to 3508
[2026-01-08 14:55:49] 2026-01-08 19:55:17,504 | INFO     | ready for new job
[2026-01-08 14:55:49] 2026-01-08 19:55:17,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:55:49] 2026-01-08 19:55:17,507 | INFO     | ***************************************
[2026-01-08 14:55:49] 2026-01-08 19:55:17,507 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:55:49] 2026-01-08 19:55:17,507 | INFO     | ***************************************
[2026-01-08 14:55:49] 2026-01-08 19:55:17,507 | INFO     | 
[2026-01-08 14:55:49] 2026-01-08 19:55:17,508 | INFO     | architecture information:
[2026-01-08 14:55:49] 2026-01-08 19:55:17,509 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:55:49] 2026-01-08 19:55:17,527 | INFO     | cat /etc/os-release:
[2026-01-08 14:55:49] NAME="CentOS Linux"
[2026-01-08 14:55:49] VERSION="7 (Core)"
[2026-01-08 14:55:49] ID="centos"
[2026-01-08 14:55:49] ID_LIKE="rhel fedora"
[2026-01-08 14:55:49] VERSION_ID="7"
[2026-01-08 14:55:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:55:49] ANSI_COLOR="0;31"
[2026-01-08 14:55:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:55:49] HOME_URL="https://www.centos.org/"
[2026-01-08 14:55:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:55:49] 
[2026-01-08 14:55:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:55:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:55:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:55:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:55:49] 
[2026-01-08 14:55:49] 2026-01-08 19:55:17,528 | INFO     | ***************************************
[2026-01-08 14:55:49] 2026-01-08 19:55:18,031 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 14:55:49] 2026-01-08 19:55:18,054 | INFO     | sufficient remaining disk space (18522046464 B)
[2026-01-08 14:55:49] 2026-01-08 19:55:18,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:55:49] 2026-01-08 19:55:18,055 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:55:49] 2026-01-08 19:55:18,056 | INFO     | update_server=False
[2026-01-08 14:55:49] 2026-01-08 19:55:18,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:55:49] 2026-01-08 19:55:18,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:55:49] 2026-01-08 19:55:18,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:55:49] 2026-01-08 19:55:18,090 | INFO     | aborting loop
[2026-01-08 14:55:49] 2026-01-08 19:55:19,011 | INFO     | all data control threads have been joined
[2026-01-08 14:55:49] 2026-01-08 19:55:19,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:55:49] 2026-01-08 19:55:19,062 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,096 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,142 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,244 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,308 | INFO     | all payload control threads have been joined
[2026-01-08 14:55:49] 2026-01-08 19:55:19,364 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,453 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,489 | INFO     | all job control threads have been joined
[2026-01-08 14:55:49] 2026-01-08 19:55:19,793 | INFO     | [job] validate thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:19,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,017 | INFO     | [data] control thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,313 | INFO     | [payload] control thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,423 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,494 | INFO     | [job] control thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:20,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:55:49] 2026-01-08 19:55:21,063 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:21,805 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:22,063 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:55:49] 2026-01-08 19:55:26,410 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:55:49] 2026-01-08 19:55:27,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176354793280)>', '<ExcThread(monitor, started 140176136197888)>']
[2026-01-08 14:55:49] 2026-01-08 19:55:32,395 | INFO     | all workflow threads have been joined
[2026-01-08 14:55:49] 2026-01-08 19:55:32,396 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:55:49] 2026-01-08 19:55:32,396 | INFO     | traces error code: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:32,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:55:49] 2026-01-08 19:55:48,894 | INFO     | PID=29491 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 14:55:49] 2026-01-08 19:55:48,896 | INFO     | [monitor] control thread has ended
[2026-01-08 14:55:49] 2026-01-08 19:55:49,025 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:55:49] 2026-01-08 19:55:49,031 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:55:49] 2026-01-08 19:55:49,036 [wrapper] pilotpid: 29491
[2026-01-08 14:55:49] 2026-01-08 19:55:49,041 [wrapper] Pilot exit status: 0
[2026-01-08 14:55:49] 2026-01-08 19:55:49,063 [wrapper] pandaids: 6962920251
[2026-01-08 14:55:49] 2026-01-08 19:55:49,114 [wrapper] cleanup supervisor_pilot 17894 29492
[2026-01-08 14:55:49] 2026-01-08 19:55:49,120 [wrapper] Test setup, not cleaning
[2026-01-08 14:55:49] 2026-01-08 19:55:49,125 [wrapper] apfmon messages muted
[2026-01-08 14:55:49] 2026-01-08 19:55:49,131 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:55:49] 2026-01-08 19:55:49,136 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:55:49]  *** Error codes and diagnostics ***
[2026-01-08 14:55:49]     "exeErrorCode": 0,
[2026-01-08 14:55:49]     "exeErrorDiag": "",
[2026-01-08 14:55:49]     "pilotErrorCode": 0,
[2026-01-08 14:55:49]     "pilotErrorDiag": "",
[2026-01-08 14:55:49]  *** Listing of results directory ***
[2026-01-08 14:55:49] total 449760
[2026-01-08 14:55:49] -rwx------ 1 boincer umatlas     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas       100 Jan  8 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:55:49] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 11:52 run_atlas
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas       105 Jan  8 11:52 job.xml
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas 226628826 Jan  8 11:52 EVNT.47898824._000830.pool.root.1
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:52 start_atlas.sh
[2026-01-08 14:55:49] drwxrwx--x 2 boincer umatlas      4096 Jan  8 11:52 shared
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 11:52 input.tar.gz
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas         0 Jan  8 11:52 boinc_lockfile
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 11:52 pandaJob.out
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas        57 Jan  8 11:52 setup.sh.local
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas    989837 Jan  8 11:53 agis_schedconf.cvmfs.json
[2026-01-08 14:55:49] drwx------ 5 boincer umatlas      4096 Jan  8 11:53 pilot3
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas 226164889 Jan  8 14:54 HITS.47898826._021856.pool.root.1
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas       531 Jan  8 14:54 boinc_task_state.xml
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas      1049 Jan  8 14:54 memory_monitor_summary.json
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas   1516240 Jan  8 14:55 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas    409743 Jan  8 14:55 log.47898826._021856.job.log.tgz.1
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas      5910 Jan  8 14:55 init_data.xml
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas      7844 Jan  8 14:55 heartbeat.json
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 14:55 boinc_mmap_file
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas        28 Jan  8 14:55 wrapper_checkpoint.txt
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas        95 Jan  8 14:55 pilot_heartbeat.json
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas       815 Jan  8 14:55 pilotlog.txt
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas   1511526 Jan  8 14:55 log.47898826._021856.job.log.1
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas       357 Jan  8 14:55 output.list
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas       620 Jan  8 14:55 runtime_log
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas   1945600 Jan  8 14:55 result.tar.gz
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas      9338 Jan  8 14:55 runtime_log.err
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas       661 Jan  8 14:55 pVzLDmkE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmixjKDm7Q08Xo.diag
[2026-01-08 14:55:49] -rw-r--r-- 1 boincer umatlas     21070 Jan  8 14:55 stderr.txt
[2026-01-08 14:55:49] HITS file was successfully produced:
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas 226164889 Jan  8 14:54 shared/HITS.pool.root.1
[2026-01-08 14:55:49]  *** Contents of shared directory: ***
[2026-01-08 14:55:49] total 444684
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas 226628826 Jan  8 11:52 ATLAS.root_0
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:52 start_atlas.sh
[2026-01-08 14:55:49] -rw-r--r-- 2 boincer umatlas    592399 Jan  8 11:52 input.tar.gz
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas 226164889 Jan  8 14:54 HITS.pool.root.1
[2026-01-08 14:55:49] -rw------- 1 boincer umatlas   1945600 Jan  8 14:55 result.tar.gz
14:55:50 (25750): run_atlas exited; CPU time 81730.772261
14:55:50 (25750): called boinc_finish(0)

</stderr_txt>
]]>

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