Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:24:59 (26483): wrapper (7.7.26015): starting
23:24:59 (26483): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:24:59] Arguments: --nthreads 8
[2026-01-08 23:24:59] Threads: 8
[2026-01-08 23:24:59] Checking for CVMFS
[2026-01-08 23:25:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:25:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:25:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:25:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:25:03] 2.11.2.0 13921 34554 106400 154922 1 60 20995269 25165824 96 130560 0 15807707 99.838 9373097 4191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 23:25:03] CVMFS is ok
[2026-01-08 23:25:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:25:03] Checking for apptainer binary...
[2026-01-08 23:25:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:25:03] Running /usr/bin/apptainer --version
[2026-01-08 23:25:03] apptainer version 1.3.2-1.el7
[2026-01-08 23:25:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:25:12] cg-vwn367.simple-grid.lan
[2026-01-08 23:25:12] apptainer works
[2026-01-08 23:25:13] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:25:13] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:25:13] Starting ATLAS job with PandaID=6963144711
[2026-01-08 23:25:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:29:34]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:29:34] 2026-01-09 04:28:31,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:29:34] 2026-01-09 04:28:31,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:29:34] 2026-01-09 04:28:31,190 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:29:34] 2026-01-09 04:28:31,191 | INFO     | sum of square deviations: 12622636670.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,194 | INFO     | sum of deviations: 217906474750.99994
[2026-01-09 05:29:34] 2026-01-09 04:28:31,195 | INFO     | mean x: 1767922423.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,195 | INFO     | mean y: 2428783.9593023257
[2026-01-09 05:29:34] 2026-01-09 04:28:31,195 | INFO     | intersect: -30517481834.535065
[2026-01-09 05:29:34] 2026-01-09 04:28:31,196 | INFO     | chi2: 9.243609153083051
[2026-01-09 05:29:34] 2026-01-09 04:28:31,196 | INFO     | sum of square deviations: 12080189290.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,200 | INFO     | sum of deviations: 237174520533.9999
[2026-01-09 05:29:34] 2026-01-09 04:28:31,200 | INFO     | mean x: 1767922271.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,200 | INFO     | mean y: 2434125.2595870206
[2026-01-09 05:29:34] 2026-01-09 04:28:31,201 | INFO     | intersect: -34707793247.825325
[2026-01-09 05:29:34] 2026-01-09 04:28:31,201 | INFO     | chi2: 8.530109414083562
[2026-01-09 05:29:34] 2026-01-09 04:28:31,201 | INFO     | current chi2=8.530109414083562 (change=7.718843659259584 %)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,201 | INFO     | right removable region: 338
[2026-01-09 05:29:34] 2026-01-09 04:28:31,202 | INFO     | sum of square deviations: 12080189290.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,206 | INFO     | sum of deviations: 97685407136.99998
[2026-01-09 05:29:34] 2026-01-09 04:28:31,206 | INFO     | mean x: 1767922576.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,206 | INFO     | mean y: 2462567.445427729
[2026-01-09 05:29:34] 2026-01-09 04:28:31,206 | INFO     | intersect: -14293690620.006308
[2026-01-09 05:29:34] 2026-01-09 04:28:31,207 | INFO     | chi2: 4.262050211116731
[2026-01-09 05:29:34] 2026-01-09 04:28:31,207 | INFO     | current chi2=4.262050211116731 (change=53.89192532339821 %)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,208 | INFO     | sum of square deviations: 11553509647.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,211 | INFO     | sum of deviations: 1280788025.0000076
[2026-01-09 05:29:34] 2026-01-09 04:28:31,211 | INFO     | mean x: 1767922728.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,211 | INFO     | mean y: 2490463.3233532934
[2026-01-09 05:29:34] 2026-01-09 04:28:31,212 | INFO     | intersect: -193496239.32142326
[2026-01-09 05:29:34] 2026-01-09 04:28:31,212 | INFO     | chi2: 1.2620624156571814
[2026-01-09 05:29:34] 2026-01-09 04:28:31,212 | INFO     | current chi2=1.2620624156571814 (change=70.38837289233861 %)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,213 | INFO     | sum of square deviations: 11042365180.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,216 | INFO     | sum of deviations: -24419107884.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,217 | INFO     | mean x: 1767922881.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,217 | INFO     | mean y: 2498077.4954407294
[2026-01-09 05:29:34] 2026-01-09 04:28:31,217 | INFO     | intersect: 3912086182.7614083
[2026-01-09 05:29:34] 2026-01-09 04:28:31,217 | INFO     | chi2: 0.8785867340381568
[2026-01-09 05:29:34] 2026-01-09 04:28:31,218 | INFO     | current chi2=0.8785867340381568 (change=30.384842846250283 %)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,218 | INFO     | sum of square deviations: 10546523325.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,222 | INFO     | sum of deviations: -19652612475.0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,222 | INFO     | mean x: 1767923033.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,222 | INFO     | mean y: 2496596.203703704
[2026-01-09 05:29:34] 2026-01-09 04:28:31,222 | INFO     | intersect: 3296881408.3666205
[2026-01-09 05:29:34] 2026-01-09 04:28:31,223 | INFO     | chi2: 0.8597944378515604
[2026-01-09 05:29:34] 2026-01-09 04:28:31,223 | INFO     | current chi2=0.8597944378515604 (change=2.138923279688428 %)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,223 | INFO     | left removable region: 40
[2026-01-09 05:29:34] 2026-01-09 04:28:31,223 | INFO     | sum of square deviations: 8205826414.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,226 | INFO     | sum of deviations: 14401302363.999998
[2026-01-09 05:29:34] 2026-01-09 04:28:31,227 | INFO     | mean x: 1767923460.5
[2026-01-09 05:29:34] 2026-01-09 04:28:31,227 | INFO     | mean y: 2499220.1073825504
[2026-01-09 05:29:34] 2026-01-09 04:28:31,227 | INFO     | intersect: -3100223043.926893
[2026-01-09 05:29:34] 2026-01-09 04:28:31,227 | INFO     | chi2: 0.0012650353604756134
[2026-01-09 05:29:34] 2026-01-09 04:28:31,228 | INFO     | current memory leak: 1.76 B/s (using 298 data points, chi2=0.00)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | ..............................
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . Timing measurements:
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . get job = 0 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . initial setup = 11 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . payload setup = 151 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . stage-in = 0 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,229 | INFO     | . payload execution = 21118 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,230 | INFO     | . stage-out = 1 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,230 | INFO     | . log creation = 0 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,230 | INFO     | ..............................
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | 
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | job summary report
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | --------------------------------------------------
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | PanDA job id: 6963144711
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | task id: 47898826
[2026-01-09 05:29:34] 2026-01-09 04:28:31,344 | INFO     | errors: (none)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | pilot state: finished 
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | transexitcode: 0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | exeerrorcode: 0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | exeerrordiag: 
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | exitcode: 0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | exitmsg: OK
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | cpuconsumptiontime: 80441 s
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | nevents: 400
[2026-01-09 05:29:34] 2026-01-09 04:28:31,345 | INFO     | neventsw: 0
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | pid: 4300
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | pgrp: 4300
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | corecount: 8
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | event service: False
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | sizes: {0: 2283741, 1: 2283825, 2: 2283996, 12: 2284024, 23: 2284052, 34: 2284080, 45: 2284236, 55: 2284264, 66: 2284292, 77: 2284320, 88: 2284376, 98: 2284684, 10
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | --------------------------------------------------
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | 
[2026-01-09 05:29:34] 2026-01-09 04:28:31,346 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-09 05:29:34] 2026-01-09 04:28:31,370 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | job 6963144711 has completed (purged errors)
[2026-01-09 05:29:34] 2026-01-09 04:28:31,373 | INFO     | overall cleanup function is called
[2026-01-09 05:29:34] 2026-01-09 04:28:32,381 | INFO     | --- collectZombieJob: --- 10, [4300]
[2026-01-09 05:29:34] 2026-01-09 04:28:32,382 | INFO     | zombie collector waiting for pid 4300
[2026-01-09 05:29:34] 2026-01-09 04:28:32,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:29:34] 2026-01-09 04:28:32,382 | INFO     | collected zombie processes
[2026-01-09 05:29:34] 2026-01-09 04:28:32,382 | INFO     | will attempt to kill all subprocesses of pid=4300
[2026-01-09 05:29:34] 2026-01-09 04:28:32,446 | INFO     | process IDs to be killed: [4300] (in reverse order)
[2026-01-09 05:29:34] 2026-01-09 04:28:32,510 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:29:34] 2026-01-09 04:28:32,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:29:34] 2026-01-09 04:28:32,513 | INFO     | did not find any defunct processes belonging to 4300
[2026-01-09 05:29:34] 2026-01-09 04:28:32,514 | INFO     | did not find any defunct processes belonging to 4300
[2026-01-09 05:29:34] 2026-01-09 04:28:32,515 | INFO     | ready for new job
[2026-01-09 05:29:34] 2026-01-09 04:28:32,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:29:34] 2026-01-09 04:28:32,517 | INFO     | ***************************************
[2026-01-09 05:29:34] 2026-01-09 04:28:32,517 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:29:34] 2026-01-09 04:28:32,518 | INFO     | ***************************************
[2026-01-09 05:29:34] 2026-01-09 04:28:32,518 | INFO     | 
[2026-01-09 05:29:34] 2026-01-09 04:28:32,518 | INFO     | pilot is running in a VM
[2026-01-09 05:29:34] 2026-01-09 04:28:32,518 | INFO     | architecture information:
[2026-01-09 05:29:34] 2026-01-09 04:28:32,519 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:29:34] 2026-01-09 04:28:32,537 | INFO     | cat /etc/os-release:
[2026-01-09 05:29:34] NAME="CentOS Linux"
[2026-01-09 05:29:34] VERSION="7 (Core)"
[2026-01-09 05:29:34] ID="centos"
[2026-01-09 05:29:34] ID_LIKE="rhel fedora"
[2026-01-09 05:29:34] VERSION_ID="7"
[2026-01-09 05:29:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:29:34] ANSI_COLOR="0;31"
[2026-01-09 05:29:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:29:34] HOME_URL="https://www.centos.org/"
[2026-01-09 05:29:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:29:34] 
[2026-01-09 05:29:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:29:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:29:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:29:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:29:34] 
[2026-01-09 05:29:34] 2026-01-09 04:28:32,538 | INFO     | ***************************************
[2026-01-09 05:29:34] 2026-01-09 04:28:33,041 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-09 05:29:34] 2026-01-09 04:28:33,060 | INFO     | sufficient remaining disk space (497947770880 B)
[2026-01-09 05:29:34] 2026-01-09 04:28:33,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:29:34] 2026-01-09 04:28:33,061 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:29:34] 2026-01-09 04:28:33,061 | INFO     | update_server=False
[2026-01-09 05:29:34] 2026-01-09 04:28:33,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:29:34] 2026-01-09 04:28:33,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:29:34] 2026-01-09 04:28:33,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:29:34] 2026-01-09 04:28:33,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:29:34] 2026-01-09 04:28:33,252 | INFO     | aborting loop
[2026-01-09 05:29:34] 2026-01-09 04:28:33,335 | INFO     | all job control threads have been joined
[2026-01-09 05:29:34] 2026-01-09 04:28:33,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:29:34] 2026-01-09 04:28:33,866 | INFO     | all data control threads have been joined
[2026-01-09 05:29:34] 2026-01-09 04:28:33,950 | INFO     | all payload control threads have been joined
[2026-01-09 05:29:34] 2026-01-09 04:28:34,067 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,068 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,127 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,257 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,340 | INFO     | [job] control thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,452 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,872 | INFO     | [data] control thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:34,955 | INFO     | [payload] control thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,031 | INFO     | [job] validate thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,036 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,068 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,120 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,361 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:35,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:37,396 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:28:43,637 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:29:34] 2026-01-09 04:28:44,643 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:29:34] 2026-01-09 04:29:03,074 | INFO     | PID=30214 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:29:34] 2026-01-09 04:29:03,074 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:29:34] 2026-01-09 04:29:03,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:29:34] 2026-01-09 04:29:03,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:29:34] 2026-01-09 04:29:27,867 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:29:34] 2026-01-09 04:29:29,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737728108352)>', '<ExcThread(monitor, started 139737146840832)>']
[2026-01-09 05:29:34] 2026-01-09 04:29:29,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:29:34] 2026-01-09 04:29:29,211 | INFO     | [monitor] control thread has ended
[2026-01-09 05:29:34] 2026-01-09 04:29:34,099 | INFO     | all workflow threads have been joined
[2026-01-09 05:29:34] 2026-01-09 04:29:34,099 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:29:34] 2026-01-09 04:29:34,100 | INFO     | traces error code: 0
[2026-01-09 05:29:34] 2026-01-09 04:29:34,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:29:34] 2026-01-09 04:29:34,244 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:29:34] 2026-01-09 04:29:34,248 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:29:34] 2026-01-09 04:29:34,252 [wrapper] pilotpid: 30214
[2026-01-09 05:29:34] 2026-01-09 04:29:34,256 [wrapper] Pilot exit status: 0
[2026-01-09 05:29:34] 2026-01-09 04:29:34,282 [wrapper] pandaids: 6963144711
[2026-01-09 05:29:34] 2026-01-09 04:29:34,328 [wrapper] cleanup supervisor_pilot  3607 30215
[2026-01-09 05:29:34] 2026-01-09 04:29:34,335 [wrapper] Test setup, not cleaning
[2026-01-09 05:29:34] 2026-01-09 04:29:34,340 [wrapper] apfmon messages muted
[2026-01-09 05:29:34] 2026-01-09 04:29:34,344 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:29:34] 2026-01-09 04:29:34,347 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:29:34]  *** Error codes and diagnostics ***
[2026-01-09 05:29:34]     "exeErrorCode": 0,
[2026-01-09 05:29:34]     "exeErrorDiag": "",
[2026-01-09 05:29:34]     "pilotErrorCode": 0,
[2026-01-09 05:29:34]     "pilotErrorDiag": "",
[2026-01-09 05:29:34]  *** Listing of results directory ***
[2026-01-09 05:29:34] total 444012
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 05:29:34] -rwx------. 1 boinc boinc     36322 Jan  8 13:23 runpilot2-wrapper.sh
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:24 queuedata.json
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:29:34] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:24 run_atlas
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:24 job.xml
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc      6390 Jan  8 23:24 init_data.xml
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc 223929952 Jan  8 23:24 EVNT.47898824._001035.pool.root.1
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:24 start_atlas.sh
[2026-01-09 05:29:34] drwxrwx--x. 2 boinc boinc        68 Jan  8 23:24 shared
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc    592397 Jan  8 23:24 input.tar.gz
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:24 boinc_lockfile
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc      2518 Jan  8 23:25 pandaJob.out
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc    989837 Jan  8 23:29 agis_schedconf.cvmfs.json
[2026-01-09 05:29:34] drwx------. 5 boinc boinc      4096 Jan  8 23:29 pilot3
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc 220016665 Jan  9 05:27 HITS.47898826._025838.pool.root.1
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc       531 Jan  9 05:28 boinc_task_state.xml
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc        95 Jan  9 05:28 pilot_heartbeat.json
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc      1013 Jan  9 05:28 memory_monitor_summary.json
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc   1516240 Jan  9 05:28 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc    558318 Jan  9 05:28 log.47898826._025838.job.log.tgz.1
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc      7780 Jan  9 05:28 heartbeat.json
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:29 boinc_mmap_file
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:29 wrapper_checkpoint.txt
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc      4881 Jan  9 05:29 pilotlog.txt
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc   2849191 Jan  9 05:29 log.47898826._025838.job.log.1
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc       357 Jan  9 05:29 output.list
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:29 runtime_log
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc   3430400 Jan  9 05:29 result.tar.gz
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:29 runtime_log.err
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc       657 Jan  9 05:29 49TKDm1D4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJPfKDmAX2sGm.diag
[2026-01-09 05:29:34] -rw-r--r--. 1 boinc boinc     20618 Jan  9 05:29 stderr.txt
[2026-01-09 05:29:34] HITS file was successfully produced:
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc 220016665 Jan  9 05:27 shared/HITS.pool.root.1
[2026-01-09 05:29:34]  *** Contents of shared directory: ***
[2026-01-09 05:29:34] total 437496
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc 223929952 Jan  8 23:24 ATLAS.root_0
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:24 start_atlas.sh
[2026-01-09 05:29:34] -rw-r--r--. 2 boinc boinc    592397 Jan  8 23:24 input.tar.gz
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc 220016665 Jan  9 05:27 HITS.pool.root.1
[2026-01-09 05:29:34] -rw-------. 1 boinc boinc   3430400 Jan  9 05:29 result.tar.gz
05:29:35 (26483): run_atlas exited; CPU time 80667.085612
05:29:35 (26483): called boinc_finish(0)

</stderr_txt>
]]>

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