Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:04:33 (3888464): wrapper (7.7.26015): starting
09:04:33 (3888464): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 09:04:33] Arguments: --nthreads 12
[2026-01-08 09:04:33] Threads: 12
[2026-01-08 09:04:33] Checking for CVMFS
[2026-01-08 09:04:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 09:04:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 09:04:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 09:04:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 09:04:33] 2.11.5.0 916571 55400 318936 154914 1 456 38269305 45568001 19162 130560 0 420299017 99.795 260339719 22379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 09:04:33] CVMFS is ok
[2026-01-08 09:04:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 09:04:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 09:04:33] Further information can be found at the LHC@home message board.
[2026-01-08 09:04:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 09:04:33] Checking for apptainer binary...
[2026-01-08 09:04:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 09:04:33] Running /usr/bin/apptainer --version
[2026-01-08 09:04:33] apptainer version 1.4.1-1.el9
[2026-01-08 09:04:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 09:04:33] wns0045.triumf.lcg
[2026-01-08 09:04:33] apptainer works
[2026-01-08 09:04:33] Set ATHENA_PROC_NUMBER=12
[2026-01-08 09:04:33] Set ATHENA_CORE_NUMBER=12
[2026-01-08 09:04:33] Starting ATLAS job with PandaID=6963144588
[2026-01-08 09:04:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:07:52]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | found no stored workdir sizes
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | WARNING  | wrong length of table data, x=[1767891906.0], y=[1252.0] (must be same and length>=4)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | could have reported an average CPU frequency of 2754 MHz (4 samples)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . Timing measurements:
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . get job = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . initial setup = 2 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload setup = 4 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . stage-in = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload execution = 15 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . stage-out = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . log creation = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144588/pilotlog.txt
[2026-01-08 09:07:52] 2026-01-08 17:07:20,603 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 09:07:52] - Log from pilotlog.txt -
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | found no stored workdir sizes
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | WARNING  | wrong length of table data, x=[1767891906.0], y=[1252.0] (must be same and length>=4)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | could have reported an average CPU frequency of 2754 MHz (4 samples)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . Timing measurements:
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . get job = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . initial setup = 2 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload setup = 4 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . stage-in = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload execution = 15 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . stage-out = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . log creation = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144588/pilotlog.txt
[2026-01-08 09:07:52] 2026-01-08 17:07:20,604 | WARNING  | 
[2026-01-08 09:07:52] [begin log extracts]
[2026-01-08 09:07:52] - Log from pilotlog.txt -
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:07:52] 2026-01-08 17:07:20,591 | WARNING  | found no stored workdir sizes
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | WARNING  | wrong length of table data, x=[1767891906.0], y=[1252.0] (must be same and length>=4)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | could have reported an average CPU frequency of 2754 MHz (4 samples)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . Timing measurements:
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . get job = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . initial setup = 2 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload setup = 4 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . stage-in = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,592 | INFO     | . payload execution = 15 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . stage-out = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | . log creation = 0 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | ..............................
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 09:07:52] 2026-01-08 17:07:20,593 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144588/pilotlog.txt
[2026-01-08 09:07:52] [end log extracts]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,604 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,605 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 09:07:52] 2026-01-08 17:07:20,663 | INFO     | 
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | job summary report
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | --------------------------------------------------
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | PanDA job id: 6963144588
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | task id: 47898826
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 09:05:13,133 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | pilot state: failed 
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | transexitcode: 65
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | exeerrorcode: 65
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | exitcode: 65
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | nevents: 0
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | neventsw: 0
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | pid: 3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:20,664 | INFO     | pgrp: 3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | corecount: 12
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | event service: False
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | sizes: {0: 2283965, 3: 2284227, 10: 2284255, 23: 2307447, 24: 2311767, 144: 2311905}
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | --------------------------------------------------
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | 
[2026-01-08 09:07:52] 2026-01-08 17:07:20,665 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 09:07:52] 2026-01-08 17:07:20,679 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,681 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,681 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:07:52] 2026-01-08 17:07:20,681 | INFO     | job 6963144588 has completed (purged errors)
[2026-01-08 09:07:52] 2026-01-08 17:07:20,681 | INFO     | overall cleanup function is called
[2026-01-08 09:07:52] 2026-01-08 17:07:21,688 | INFO     | --- collectZombieJob: --- 10, [3898671]
[2026-01-08 09:07:52] 2026-01-08 17:07:21,688 | INFO     | zombie collector waiting for pid 3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:21,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:07:52] 2026-01-08 17:07:21,688 | INFO     | collected zombie processes
[2026-01-08 09:07:52] 2026-01-08 17:07:21,688 | INFO     | will attempt to kill all subprocesses of pid=3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:21,879 | INFO     | process IDs to be killed: [3898671] (in reverse order)
[2026-01-08 09:07:52] 2026-01-08 17:07:21,950 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:07:52] 2026-01-08 17:07:21,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:07:52] 2026-01-08 17:07:21,959 | INFO     | did not find any defunct processes belonging to 3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:21,966 | INFO     | did not find any defunct processes belonging to 3898671
[2026-01-08 09:07:52] 2026-01-08 17:07:21,966 | INFO     | ready for new job
[2026-01-08 09:07:52] 2026-01-08 17:07:21,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:07:52] 2026-01-08 17:07:21,968 | INFO     | ***************************************
[2026-01-08 09:07:52] 2026-01-08 17:07:21,968 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:07:52] 2026-01-08 17:07:21,968 | INFO     | ***************************************
[2026-01-08 09:07:52] 2026-01-08 17:07:21,968 | INFO     | 
[2026-01-08 09:07:52] 2026-01-08 17:07:21,970 | INFO     | architecture information:
[2026-01-08 09:07:52] 2026-01-08 17:07:21,970 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:07:52] 2026-01-08 17:07:21,981 | INFO     | cat /etc/os-release:
[2026-01-08 09:07:52] NAME="CentOS Linux"
[2026-01-08 09:07:52] VERSION="7 (Core)"
[2026-01-08 09:07:52] ID="centos"
[2026-01-08 09:07:52] ID_LIKE="rhel fedora"
[2026-01-08 09:07:52] VERSION_ID="7"
[2026-01-08 09:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:07:52] ANSI_COLOR="0;31"
[2026-01-08 09:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:07:52] HOME_URL="https://www.centos.org/"
[2026-01-08 09:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:07:52] 
[2026-01-08 09:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:07:52] 
[2026-01-08 09:07:52] 2026-01-08 17:07:21,981 | INFO     | ***************************************
[2026-01-08 09:07:52] 2026-01-08 17:07:22,485 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 09:07:52] 2026-01-08 17:07:22,500 | INFO     | sufficient remaining disk space (1244496134144 B)
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | INFO     | update_server=False
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:07:52] 2026-01-08 17:07:22,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:07:52] 2026-01-08 17:07:22,946 | INFO     | all job control threads have been joined
[2026-01-08 09:07:52] 2026-01-08 17:07:23,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:07:52] 2026-01-08 17:07:23,204 | INFO     | aborting loop
[2026-01-08 09:07:52] 2026-01-08 17:07:23,507 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:23,507 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:23,567 | INFO     | all data control threads have been joined
[2026-01-08 09:07:52] 2026-01-08 17:07:23,710 | INFO     | all payload control threads have been joined
[2026-01-08 09:07:52] 2026-01-08 17:07:23,740 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:23,952 | INFO     | [job] control thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,209 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,403 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:07:52] 2026-01-08 17:07:24,484 | INFO     | [job] validate thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,507 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,572 | INFO     | [data] control thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,584 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,699 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,708 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,717 | INFO     | [payload] control thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,790 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:24,978 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:28,437 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:07:52] 2026-01-08 17:07:42,241 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:07:52] 2026-01-08 17:07:44,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122121955136)>', '<ExcThread(monitor, started 140121722562304)>']
[2026-01-08 09:07:52] 2026-01-08 17:07:49,206 | INFO     | all workflow threads have been joined
[2026-01-08 09:07:52] 2026-01-08 17:07:49,207 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:07:52] 2026-01-08 17:07:49,207 | INFO     | traces error code: 0
[2026-01-08 09:07:52] 2026-01-08 17:07:49,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:07:52] 2026-01-08 17:07:52,445 | INFO     | PID=3892114 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 09:07:52] 2026-01-08 17:07:52,445 | INFO     | .. there are 35 such processes running
[2026-01-08 09:07:52] 2026-01-08 17:07:52,445 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:07:52] 2026-01-08 17:07:52,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:07:52] 2026-01-08 17:07:52,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:07:52] 2026-01-08 17:07:52,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:07:52] 2026-01-08 17:07:52,446 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 09:07:52] 2026-01-08 17:07:52,446 | INFO     | [monitor] control thread has ended
[2026-01-08 09:07:52] 2026-01-08 17:07:52,570 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:07:52] 2026-01-08 17:07:52,572 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:07:52] 2026-01-08 17:07:52,574 [wrapper] pilotpid: 3892114
[2026-01-08 09:07:52] 2026-01-08 17:07:52,576 [wrapper] Pilot exit status: 0
[2026-01-08 09:07:52] 2026-01-08 17:07:52,584 [wrapper] pandaids: 6963144588
[2026-01-08 09:07:52] 2026-01-08 17:07:52,630 [wrapper] cleanup supervisor_pilot 3892120 3892115
[2026-01-08 09:07:52] 2026-01-08 17:07:52,632 [wrapper] Test setup, not cleaning
[2026-01-08 09:07:52] 2026-01-08 17:07:52,634 [wrapper] apfmon messages muted
[2026-01-08 09:07:52] 2026-01-08 17:07:52,636 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:07:52] 2026-01-08 17:07:52,637 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:07:52]  *** Error codes and diagnostics ***
[2026-01-08 09:07:52]     "exeErrorCode": 65,
[2026-01-08 09:07:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 09:07:52]     "pilotErrorCode": 1305,
[2026-01-08 09:07:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 09:07:52]  *** Listing of results directory ***
[2026-01-08 09:07:52] total 221848
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc    579449 Jan  8 04:19 pilot3.tar.gz
[2026-01-08 09:07:52] -rwx------. 1 boinc boinc     36322 Jan  8 04:23 runpilot2-wrapper.sh
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc      5112 Jan  8 04:24 queuedata.json
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc       100 Jan  8 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:07:52] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 09:04 run_atlas
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc       105 Jan  8 09:04 job.xml
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc 223063332 Jan  8 09:04 EVNT.47898824._001030.pool.root.1
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc      6595 Jan  8 09:04 init_data.xml
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc     15847 Jan  8 09:04 start_atlas.sh
[2026-01-08 09:07:52] drwxrwx--x. 2 boinc boinc      4096 Jan  8 09:04 shared
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc    592395 Jan  8 09:04 input.tar.gz
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc         0 Jan  8 09:04 boinc_lockfile
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc      2518 Jan  8 09:04 pandaJob.out
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc    989837 Jan  8 09:04 agis_schedconf.cvmfs.json
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc   1516240 Jan  8 09:04 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:07:52] drwx------. 5 boinc boinc      4096 Jan  8 09:04 pilot3
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc       521 Jan  8 09:05 boinc_task_state.xml
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc       953 Jan  8 09:05 memory_monitor_summary.json
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc     20313 Jan  8 09:05 log.47898826._025715.job.log.tgz.1
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc      8395 Jan  8 09:07 heartbeat.json
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc      8192 Jan  8 09:07 boinc_mmap_file
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc        22 Jan  8 09:07 wrapper_checkpoint.txt
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc        95 Jan  8 09:07 pilot_heartbeat.json
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc       893 Jan  8 09:07 pilotlog.txt
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc     81444 Jan  8 09:07 log.47898826._025715.job.log.1
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc       188 Jan  8 09:07 output.list
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc       620 Jan  8 09:07 runtime_log
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc    122880 Jan  8 09:07 result.tar.gz
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc       645 Jan  8 09:07 wqgMDmqD4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpbkKDmRL3hMm.diag
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc      8636 Jan  8 09:07 runtime_log.err
[2026-01-08 09:07:52] -rw-r--r--. 1 boinc boinc     21615 Jan  8 09:07 stderr.txt
[2026-01-08 09:07:52] No HITS result produced
[2026-01-08 09:07:52]  *** Contents of shared directory: ***
[2026-01-08 09:07:52] total 218556
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc 223063332 Jan  8 09:04 ATLAS.root_0
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc     15847 Jan  8 09:04 start_atlas.sh
[2026-01-08 09:07:52] -rw-r--r--. 2 boinc boinc    592395 Jan  8 09:04 input.tar.gz
[2026-01-08 09:07:52] -rw-------. 1 boinc boinc    122880 Jan  8 09:07 result.tar.gz
09:07:53 (3888464): run_atlas exited; CPU time 21.274997
09:07:53 (3888464): called boinc_finish(0)

</stderr_txt>
]]>

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