Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:38 (2467): wrapper (7.7.26015): starting
11:47:38 (2467): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:47:38] Arguments: --nthreads 8
[2026-01-08 11:47:38] Threads: 8
[2026-01-08 11:47:38] Checking for CVMFS
[2026-01-08 11:47:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:47:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:47:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:47:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:47:39] 2.11.2.0 2866 135478 113556 154914 2 56 13994074 20275200 1 130560 0 36572950 99.821 9251076 24625 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 11:47:39] CVMFS is ok
[2026-01-08 11:47:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:47:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:47:39] Further information can be found at the LHC@home message board.
[2026-01-08 11:47:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:47:39] Checking for apptainer binary...
[2026-01-08 11:47:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:47:39] Running /usr/bin/apptainer --version
[2026-01-08 11:47:39] apptainer version 1.3.2-1.el7
[2026-01-08 11:47:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:47:40] c-204-35.aglt2.org
[2026-01-08 11:47:40] apptainer works
[2026-01-08 11:47:40] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:47:40] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:47:40] Starting ATLAS job with PandaID=6963144575
[2026-01-08 11:47:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 14:43:21]  *** The last 200 lines of the pilot log: ***
[2026-01-08 14:43:21] 2026-01-08 19:43:03,840 | INFO     | time since job start (10505s) is within the limit (174528.0s)
[2026-01-08 14:43:21] 2026-01-08 19:43:04,763 | INFO     | monitor loop #771: job 0:6963144575 is in state 'finished'
[2026-01-08 14:43:21] 2026-01-08 19:43:04,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:43:21] 2026-01-08 19:43:05,845 | INFO     | time since job start (10507s) is within the limit (174528.0s)
[2026-01-08 14:43:21] 2026-01-08 19:43:07,266 | INFO     | monitor loop #772: job 0:6963144575 is in state 'finished'
[2026-01-08 14:43:21] 2026-01-08 19:43:07,267 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 14:43:21] 2026-01-08 19:43:07,851 | INFO     | time since job start (10509s) is within the limit (174528.0s)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,510 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-08 14:43:21] 2026-01-08 19:43:09,513 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-08 14:43:21] 2026-01-08 19:43:09,515 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963144575/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,516 | INFO     | extracted standard info from prmon json
[2026-01-08 14:43:21] 2026-01-08 19:43:09,516 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 14:43:21] 2026-01-08 19:43:09,516 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 14:43:21] 2026-01-08 19:43:09,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 14:43:21] 2026-01-08 19:43:09,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 14:43:21] 2026-01-08 19:43:09,520 | INFO     | fitting pss+swap vs Time
[2026-01-08 14:43:21] 2026-01-08 19:43:09,521 | INFO     | sum of square deviations: 1577789583.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,522 | INFO     | sum of deviations: 9124144509.500004
[2026-01-08 14:43:21] 2026-01-08 19:43:09,522 | INFO     | mean x: 1767896124.5
[2026-01-08 14:43:21] 2026-01-08 19:43:09,522 | INFO     | mean y: 2505007.226744186
[2026-01-08 14:43:21] 2026-01-08 19:43:09,523 | INFO     | intersect: -10221000009.869703
[2026-01-08 14:43:21] 2026-01-08 19:43:09,523 | INFO     | chi2: 1.5783399804552458
[2026-01-08 14:43:21] 2026-01-08 19:43:09,523 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,524 | INFO     | sum of deviations: 8855607717.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,524 | INFO     | mean x: 1767895972.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,524 | INFO     | mean y: 2504700.706586826
[2026-01-08 14:43:21] 2026-01-08 19:43:09,525 | INFO     | intersect: -10838332223.08034
[2026-01-08 14:43:21] 2026-01-08 19:43:09,525 | INFO     | chi2: 1.579431900206394
[2026-01-08 14:43:21] 2026-01-08 19:43:09,525 | INFO     | current chi2=1.579431900206394 (change=-0.06918153025770397 %)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,525 | INFO     | right removable region: 166
[2026-01-08 14:43:21] 2026-01-08 19:43:09,525 | INFO     | sum of square deviations: 1444149868.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,526 | INFO     | sum of deviations: -16252561230.000006
[2026-01-08 14:43:21] 2026-01-08 19:43:09,526 | INFO     | mean x: 1767896277.0
[2026-01-08 14:43:21] 2026-01-08 19:43:09,527 | INFO     | mean y: 2533562.2275449103
[2026-01-08 14:43:21] 2026-01-08 19:43:09,527 | INFO     | intersect: 19898558986.53036
[2026-01-08 14:43:21] 2026-01-08 19:43:09,527 | INFO     | chi2: 0.13860458543138476
[2026-01-08 14:43:21] 2026-01-08 19:43:09,527 | INFO     | current chi2=0.13860458543138476 (change=91.21833146548016 %)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,527 | INFO     | sum of square deviations: 1318277740.5
[2026-01-08 14:43:21] 2026-01-08 19:43:09,528 | INFO     | sum of deviations: -16289156960.000002
[2026-01-08 14:43:21] 2026-01-08 19:43:09,528 | INFO     | mean x: 1767896429.5
[2026-01-08 14:43:21] 2026-01-08 19:43:09,529 | INFO     | mean y: 2533542.1975308643
[2026-01-08 14:43:21] 2026-01-08 19:43:09,529 | INFO     | intersect: 21847355421.86203
[2026-01-08 14:43:21] 2026-01-08 19:43:09,529 | INFO     | chi2: 0.12082913550846208
[2026-01-08 14:43:21] 2026-01-08 19:43:09,529 | INFO     | current chi2=0.12082913550846208 (change=12.82457565714685 %)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,529 | INFO     | left removable region: 20
[2026-01-08 14:43:21] 2026-01-08 19:43:09,530 | INFO     | sum of square deviations: 964976232.5
[2026-01-08 14:43:21] 2026-01-08 19:43:09,530 | INFO     | sum of deviations: -5215499634.000001
[2026-01-08 14:43:21] 2026-01-08 19:43:09,531 | INFO     | mean x: 1767896551.5
[2026-01-08 14:43:21] 2026-01-08 19:43:09,531 | INFO     | mean y: 2519043.1369863013
[2026-01-08 14:43:21] 2026-01-08 19:43:09,531 | INFO     | intersect: 9557639166.054743
[2026-01-08 14:43:21] 2026-01-08 19:43:09,531 | INFO     | chi2: 0.06875163488704696
[2026-01-08 14:43:21] 2026-01-08 19:43:09,531 | INFO     | current memory leak: -5.40 B/s (using 146 data points, chi2=0.07)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | could have reported an average CPU frequency of 2019 MHz (9 samples)
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | ..............................
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | . Timing measurements:
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | . get job = 0 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | . initial setup = 2 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | . payload setup = 8 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,532 | INFO     | . stage-in = 0 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,533 | INFO     | . payload execution = 10470 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,533 | INFO     | . stage-out = 0 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,533 | INFO     | . log creation = 0 s
[2026-01-08 14:43:21] 2026-01-08 19:43:09,533 | INFO     | ..............................
[2026-01-08 14:43:21] 2026-01-08 19:43:09,854 | INFO     | time since job start (10511s) is within the limit (174528.0s)
[2026-01-08 14:43:21] 2026-01-08 19:43:10,080 | INFO     | 
[2026-01-08 14:43:21] 2026-01-08 19:43:10,080 | INFO     | job summary report
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | --------------------------------------------------
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | PanDA job id: 6963144575
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | task id: 47898826
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | errors: (none)
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 14:43:21] 2026-01-08 19:43:10,081 | INFO     | pilot state: finished 
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | transexitcode: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | exeerrorcode: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | exeerrordiag: 
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | exitcode: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | exitmsg: OK
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | cpuconsumptiontime: 78017 s
[2026-01-08 14:43:21] 2026-01-08 19:43:10,082 | INFO     | nevents: 400
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | neventsw: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | pid: 12861
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | pgrp: 12861
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | corecount: 8
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | event service: False
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | sizes: {0: 2283968, 6: 2284230, 11: 2284258, 10482: 2313146, 10484: 2322144, 10485: 2322200, 10494: 2322586}
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | --------------------------------------------------
[2026-01-08 14:43:21] 2026-01-08 19:43:10,083 | INFO     | 
[2026-01-08 14:43:21] 2026-01-08 19:43:10,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 14:43:21] 2026-01-08 19:43:10,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,114 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,114 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,114 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,114 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,114 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,115 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 14:43:21] 2026-01-08 19:43:10,116 | INFO     | job 6963144575 has completed (purged errors)
[2026-01-08 14:43:21] 2026-01-08 19:43:10,116 | INFO     | overall cleanup function is called
[2026-01-08 14:43:21] 2026-01-08 19:43:11,124 | INFO     | --- collectZombieJob: --- 10, [12861]
[2026-01-08 14:43:21] 2026-01-08 19:43:11,124 | INFO     | zombie collector waiting for pid 12861
[2026-01-08 14:43:21] 2026-01-08 19:43:11,125 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 14:43:21] 2026-01-08 19:43:11,125 | INFO     | collected zombie processes
[2026-01-08 14:43:21] 2026-01-08 19:43:11,125 | INFO     | will attempt to kill all subprocesses of pid=12861
[2026-01-08 14:43:21] 2026-01-08 19:43:11,213 | INFO     | process IDs to be killed: [12861] (in reverse order)
[2026-01-08 14:43:21] 2026-01-08 19:43:11,268 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 14:43:21] 2026-01-08 19:43:11,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 14:43:21] 2026-01-08 19:43:11,272 | INFO     | did not find any defunct processes belonging to 12861
[2026-01-08 14:43:21] 2026-01-08 19:43:11,275 | INFO     | did not find any defunct processes belonging to 12861
[2026-01-08 14:43:21] 2026-01-08 19:43:11,275 | INFO     | ready for new job
[2026-01-08 14:43:21] 2026-01-08 19:43:11,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 14:43:21] 2026-01-08 19:43:11,277 | INFO     | ***************************************
[2026-01-08 14:43:21] 2026-01-08 19:43:11,277 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 14:43:21] 2026-01-08 19:43:11,277 | INFO     | ***************************************
[2026-01-08 14:43:21] 2026-01-08 19:43:11,277 | INFO     | 
[2026-01-08 14:43:21] 2026-01-08 19:43:11,278 | INFO     | architecture information:
[2026-01-08 14:43:21] 2026-01-08 19:43:11,279 | INFO     | executing command: cat /etc/os-release
[2026-01-08 14:43:21] 2026-01-08 19:43:11,296 | INFO     | cat /etc/os-release:
[2026-01-08 14:43:21] NAME="CentOS Linux"
[2026-01-08 14:43:21] VERSION="7 (Core)"
[2026-01-08 14:43:21] ID="centos"
[2026-01-08 14:43:21] ID_LIKE="rhel fedora"
[2026-01-08 14:43:21] VERSION_ID="7"
[2026-01-08 14:43:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 14:43:21] ANSI_COLOR="0;31"
[2026-01-08 14:43:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 14:43:21] HOME_URL="https://www.centos.org/"
[2026-01-08 14:43:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 14:43:21] 
[2026-01-08 14:43:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 14:43:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 14:43:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 14:43:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 14:43:21] 
[2026-01-08 14:43:21] 2026-01-08 19:43:11,296 | INFO     | ***************************************
[2026-01-08 14:43:21] 2026-01-08 19:43:11,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 14:43:21] 2026-01-08 19:43:11,819 | INFO     | sufficient remaining disk space (18502123520 B)
[2026-01-08 14:43:21] 2026-01-08 19:43:11,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 14:43:21] 2026-01-08 19:43:11,819 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 14:43:21] 2026-01-08 19:43:11,819 | INFO     | update_server=False
[2026-01-08 14:43:21] 2026-01-08 19:43:11,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 14:43:21] 2026-01-08 19:43:11,820 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-08 14:43:21] 2026-01-08 19:43:11,820 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 14:43:21] 2026-01-08 19:43:11,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 14:43:21] 2026-01-08 19:43:11,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 14:43:21] 2026-01-08 19:43:11,825 | INFO     | all data control threads have been joined
[2026-01-08 14:43:21] 2026-01-08 19:43:11,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 14:43:21] 2026-01-08 19:43:12,227 | INFO     | all job control threads have been joined
[2026-01-08 14:43:21] 2026-01-08 19:43:12,273 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 14:43:21] 2026-01-08 19:43:12,273 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 14:43:21] 2026-01-08 19:43:12,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:43:21] 2026-01-08 19:43:12,274 | INFO     | will abort loop
[2026-01-08 14:43:21] 2026-01-08 19:43:12,544 | INFO     | all payload control threads have been joined
[2026-01-08 14:43:21] 2026-01-08 19:43:12,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 14:43:21] 2026-01-08 19:43:12,824 | INFO     | [job] retrieve thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:12,827 | INFO     | [data] control thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:12,899 | INFO     | [payload] failed_post thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:12,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,232 | INFO     | [job] control thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,265 | INFO     | [payload] validate_post thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,279 | INFO     | [job] job monitor thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,549 | INFO     | [payload] control thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,569 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,570 | INFO     | [data] copytool_in thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,576 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:13,771 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:14,113 | INFO     | [job] validate thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:14,612 | INFO     | [data] copytool_out thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:14,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 14:43:21] 2026-01-08 19:43:14,979 | INFO     | [monitor] cgroup control has ended
[2026-01-08 14:43:21] 2026-01-08 19:43:15,645 | INFO     | [job] queue monitor thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:15,834 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 14:43:21] 2026-01-08 19:43:16,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240419120960)>', '<ExcThread(monitor, started 140239507011328)>']
[2026-01-08 14:43:21] 2026-01-08 19:43:16,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 14:43:21] 2026-01-08 19:43:16,847 | INFO     | [monitor] control thread has ended
[2026-01-08 14:43:21] 2026-01-08 19:43:21,267 | INFO     | all workflow threads have been joined
[2026-01-08 14:43:21] 2026-01-08 19:43:21,267 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 14:43:21] 2026-01-08 19:43:21,268 | INFO     | traces error code: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:21,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 14:43:21] 2026-01-08 19:43:21,382 [wrapper] ==== pilot stdout END ====
[2026-01-08 14:43:21] 2026-01-08 19:43:21,387 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 14:43:21] 2026-01-08 19:43:21,392 [wrapper] pilotpid: 6315
[2026-01-08 14:43:21] 2026-01-08 19:43:21,397 [wrapper] Pilot exit status: 0
[2026-01-08 14:43:21] 2026-01-08 19:43:21,415 [wrapper] pandaids: 6963144575
[2026-01-08 14:43:21] 2026-01-08 19:43:21,460 [wrapper] cleanup supervisor_pilot 28286 6316
[2026-01-08 14:43:21] 2026-01-08 19:43:21,464 [wrapper] Test setup, not cleaning
[2026-01-08 14:43:21] 2026-01-08 19:43:21,468 [wrapper] apfmon messages muted
[2026-01-08 14:43:21] 2026-01-08 19:43:21,472 [wrapper] ==== wrapper stdout END ====
[2026-01-08 14:43:21] 2026-01-08 19:43:21,477 [wrapper] ==== wrapper stderr END ====
[2026-01-08 14:43:21]  *** Error codes and diagnostics ***
[2026-01-08 14:43:21]     "exeErrorCode": 0,
[2026-01-08 14:43:21]     "exeErrorDiag": "",
[2026-01-08 14:43:21]     "pilotErrorCode": 0,
[2026-01-08 14:43:21]     "pilotErrorDiag": "",
[2026-01-08 14:43:21]  *** Listing of results directory ***
[2026-01-08 14:43:21] total 439544
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 07:19 pilot3.tar.gz
[2026-01-08 14:43:21] -rwx------ 1 boincer umatlas     36322 Jan  8 07:23 runpilot2-wrapper.sh
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 07:24 queuedata.json
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas       100 Jan  8 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 14:43:21] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 11:47 run_atlas
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas       105 Jan  8 11:47 job.xml
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas 223063332 Jan  8 11:47 EVNT.47898824._001030.pool.root.1
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:47 start_atlas.sh
[2026-01-08 14:43:21] drwxrwx--x 2 boincer umatlas      4096 Jan  8 11:47 shared
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 11:47 input.tar.gz
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas         0 Jan  8 11:47 boinc_lockfile
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas      2518 Jan  8 11:47 pandaJob.out
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas        57 Jan  8 11:47 setup.sh.local
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas    989837 Jan  8 11:47 agis_schedconf.cvmfs.json
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas   1516240 Jan  8 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 14:43:21] drwx------ 5 boincer umatlas      4096 Jan  8 11:47 pilot3
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas      5911 Jan  8 14:40 init_data.xml
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas 219401487 Jan  8 14:42 HITS.47898826._025702.pool.root.1
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas        95 Jan  8 14:42 pilot_heartbeat.json
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas       531 Jan  8 14:42 boinc_task_state.xml
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas      1049 Jan  8 14:42 memory_monitor_summary.json
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas    403074 Jan  8 14:42 log.47898826._025702.job.log.tgz.1
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas        28 Jan  8 14:43 wrapper_checkpoint.txt
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 14:43 boinc_mmap_file
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas      7842 Jan  8 14:43 heartbeat.json
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas      4738 Jan  8 14:43 pilotlog.txt
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas   1455548 Jan  8 14:43 log.47898826._025702.job.log.1
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas       357 Jan  8 14:43 output.list
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas       620 Jan  8 14:43 runtime_log
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas   1873920 Jan  8 14:43 result.tar.gz
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas      9343 Jan  8 14:43 runtime_log.err
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas       662 Jan  8 14:43 6hLMDmqD4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcbkKDmsNafYm.diag
[2026-01-08 14:43:21] -rw-r--r-- 1 boincer umatlas     21209 Jan  8 14:43 stderr.txt
[2026-01-08 14:43:21] HITS file was successfully produced:
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas 219401487 Jan  8 14:42 shared/HITS.pool.root.1
[2026-01-08 14:43:21]  *** Contents of shared directory: ***
[2026-01-08 14:43:21] total 434528
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas 223063332 Jan  8 11:47 ATLAS.root_0
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:47 start_atlas.sh
[2026-01-08 14:43:21] -rw-r--r-- 2 boincer umatlas    592397 Jan  8 11:47 input.tar.gz
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas 219401487 Jan  8 14:42 HITS.pool.root.1
[2026-01-08 14:43:21] -rw------- 1 boincer umatlas   1873920 Jan  8 14:43 result.tar.gz
14:43:23 (2467): run_atlas exited; CPU time 77983.702948
14:43:23 (2467): called boinc_finish(0)

</stderr_txt>
]]>

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