Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:56:27 (2808): wrapper (7.7.26015): starting
22:56:27 (2808): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 22:56:27] Arguments: --nthreads 8
[2026-01-08 22:56:27] Threads: 8
[2026-01-08 22:56:27] Checking for CVMFS
[2026-01-08 22:56:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 22:56:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 22:56:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 22:56:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 22:56:30] 2.11.2.0 7091 34544 97856 154920 1 61 17445029 25165824 96 130560 0 15774882 99.805 9200713 3316 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 22:56:30] CVMFS is ok
[2026-01-08 22:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 22:56:30] Checking for apptainer binary...
[2026-01-08 22:56:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 22:56:30] Running /usr/bin/apptainer --version
[2026-01-08 22:56:30] apptainer version 1.3.2-1.el7
[2026-01-08 22:56:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 22:56:52] cg-vwn433.simple-grid.lan
[2026-01-08 22:56:52] apptainer works
[2026-01-08 22:56:52] Set ATHENA_PROC_NUMBER=8
[2026-01-08 22:56:52] Set ATHENA_CORE_NUMBER=8
[2026-01-08 22:56:52] Starting ATLAS job with PandaID=6963144300
[2026-01-08 22:56:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:16:06]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:16:06] 2026-01-09 04:15:28,501 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 05:16:06] 2026-01-09 04:15:28,503 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963144300/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,504 | INFO     | extracted standard info from prmon json
[2026-01-09 05:16:06] 2026-01-09 04:15:28,504 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:16:06] 2026-01-09 04:15:28,505 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:16:06] 2026-01-09 04:15:28,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:16:06] 2026-01-09 04:15:28,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:16:06] 2026-01-09 04:15:28,515 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:16:06] 2026-01-09 04:15:28,516 | INFO     | sum of square deviations: 14227353269.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,523 | INFO     | sum of deviations: 118916784584.99997
[2026-01-09 05:16:06] 2026-01-09 04:15:28,524 | INFO     | mean x: 1767921094.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,524 | INFO     | mean y: 2469509.6089385473
[2026-01-09 05:16:06] 2026-01-09 04:15:28,524 | INFO     | intersect: -14774382373.912352
[2026-01-09 05:16:06] 2026-01-09 04:15:28,524 | INFO     | chi2: 7.618859633293968
[2026-01-09 05:16:06] 2026-01-09 04:15:28,525 | INFO     | sum of square deviations: 13639518992.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,529 | INFO     | sum of deviations: 140733708597.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,530 | INFO     | mean x: 1767920942.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,530 | INFO     | mean y: 2475099.501416431
[2026-01-09 05:16:06] 2026-01-09 04:15:28,530 | INFO     | intersect: -18239082452.48368
[2026-01-09 05:16:06] 2026-01-09 04:15:28,531 | INFO     | chi2: 6.891409842832952
[2026-01-09 05:16:06] 2026-01-09 04:15:28,531 | INFO     | current chi2=6.891409842832952 (change=9.548014079195042 %)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,531 | INFO     | right removable region: 352
[2026-01-09 05:16:06] 2026-01-09 04:15:28,531 | INFO     | sum of square deviations: 13639518992.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,536 | INFO     | sum of deviations: -2858320187.999996
[2026-01-09 05:16:06] 2026-01-09 04:15:28,536 | INFO     | mean x: 1767921247.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,536 | INFO     | mean y: 2501082.76203966
[2026-01-09 05:16:06] 2026-01-09 04:15:28,536 | INFO     | intersect: 372989587.08965826
[2026-01-09 05:16:06] 2026-01-09 04:15:28,537 | INFO     | chi2: 3.1250025616321917
[2026-01-09 05:16:06] 2026-01-09 04:15:28,537 | INFO     | current chi2=3.1250025616321917 (change=58.983329368924 %)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,537 | INFO     | sum of square deviations: 13068103627.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,545 | INFO     | sum of deviations: -83399619436.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,546 | INFO     | mean x: 1767921399.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,546 | INFO     | mean y: 2522526.9137931033
[2026-01-09 05:16:06] 2026-01-09 04:15:28,546 | INFO     | intersect: 11285259190.12992
[2026-01-09 05:16:06] 2026-01-09 04:15:28,547 | INFO     | chi2: 1.0561192254042246
[2026-01-09 05:16:06] 2026-01-09 04:15:28,547 | INFO     | current chi2=1.0561192254042246 (change=66.20421249022553 %)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,547 | INFO     | sum of square deviations: 12512874612.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,551 | INFO     | sum of deviations: -94334707027.00002
[2026-01-09 05:16:06] 2026-01-09 04:15:28,551 | INFO     | mean x: 1767921552.0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,551 | INFO     | mean y: 2525508.1574344025
[2026-01-09 05:16:06] 2026-01-09 04:15:28,551 | INFO     | intersect: 13330906621.694574
[2026-01-09 05:16:06] 2026-01-09 04:15:28,552 | INFO     | chi2: 0.9734160836925722
[2026-01-09 05:16:06] 2026-01-09 04:15:28,552 | INFO     | current chi2=0.9734160836925722 (change=7.830852778955734 %)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,552 | INFO     | left removable region: 30
[2026-01-09 05:16:06] 2026-01-09 04:15:28,553 | INFO     | sum of square deviations: 10352419220.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,556 | INFO     | sum of deviations: -46319370675.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,556 | INFO     | mean x: 1767921826.5
[2026-01-09 05:16:06] 2026-01-09 04:15:28,557 | INFO     | mean y: 2524925.7919254657
[2026-01-09 05:16:06] 2026-01-09 04:15:28,557 | INFO     | intersect: 7912659229.936288
[2026-01-09 05:16:06] 2026-01-09 04:15:28,557 | INFO     | chi2: 0.1593707034851857
[2026-01-09 05:16:06] 2026-01-09 04:15:28,557 | INFO     | current memory leak: -4.47 B/s (using 322 data points, chi2=0.16)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,558 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,558 | INFO     | ..............................
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . Timing measurements:
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . get job = 0 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . initial setup = 12 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . payload setup = 156 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . stage-in = 0 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . payload execution = 21991 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . stage-out = 3 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,559 | INFO     | . log creation = 0 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,562 | INFO     | ..............................
[2026-01-09 05:16:06] 2026-01-09 04:15:28,708 | INFO     | 
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | job summary report
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | --------------------------------------------------
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | PanDA job id: 6963144300
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | task id: 47898826
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | errors: (none)
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | pilot state: finished 
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | transexitcode: 0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,709 | INFO     | exeerrorcode: 0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | exeerrordiag: 
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | exitcode: 0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | exitmsg: OK
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | cpuconsumptiontime: 82901 s
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | nevents: 400
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | neventsw: 0
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | pid: 13059
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | pgrp: 13059
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | corecount: 8
[2026-01-09 05:16:06] 2026-01-09 04:15:28,710 | INFO     | event service: False
[2026-01-09 05:16:06] 2026-01-09 04:15:28,711 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 23: 2284080, 34: 2284108, 45: 2284264, 56: 2284292, 66: 2284320, 77: 2284348, 88: 2284404, 99: 2284712, 10
[2026-01-09 05:16:06] 2026-01-09 04:15:28,711 | INFO     | --------------------------------------------------
[2026-01-09 05:16:06] 2026-01-09 04:15:28,711 | INFO     | 
[2026-01-09 05:16:06] 2026-01-09 04:15:28,711 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 05:16:06] 2026-01-09 04:15:29,356 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,356 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,356 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:16:06] 2026-01-09 04:15:29,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,359 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:16:06] 2026-01-09 04:15:29,359 | INFO     | job 6963144300 has completed (purged errors)
[2026-01-09 05:16:06] 2026-01-09 04:15:29,359 | INFO     | overall cleanup function is called
[2026-01-09 05:16:06] 2026-01-09 04:15:30,368 | INFO     | --- collectZombieJob: --- 10, [13059]
[2026-01-09 05:16:06] 2026-01-09 04:15:30,369 | INFO     | zombie collector waiting for pid 13059
[2026-01-09 05:16:06] 2026-01-09 04:15:30,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:16:06] 2026-01-09 04:15:30,369 | INFO     | collected zombie processes
[2026-01-09 05:16:06] 2026-01-09 04:15:30,369 | INFO     | will attempt to kill all subprocesses of pid=13059
[2026-01-09 05:16:06] 2026-01-09 04:15:30,470 | INFO     | process IDs to be killed: [13059] (in reverse order)
[2026-01-09 05:16:06] 2026-01-09 04:15:31,483 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:16:06] 2026-01-09 04:15:31,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:16:06] 2026-01-09 04:15:31,486 | INFO     | did not find any defunct processes belonging to 13059
[2026-01-09 05:16:06] 2026-01-09 04:15:31,487 | INFO     | did not find any defunct processes belonging to 13059
[2026-01-09 05:16:06] 2026-01-09 04:15:31,488 | INFO     | ready for new job
[2026-01-09 05:16:06] 2026-01-09 04:15:31,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:16:06] 2026-01-09 04:15:31,490 | INFO     | ***************************************
[2026-01-09 05:16:06] 2026-01-09 04:15:31,490 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:16:06] 2026-01-09 04:15:31,490 | INFO     | ***************************************
[2026-01-09 05:16:06] 2026-01-09 04:15:31,490 | INFO     | 
[2026-01-09 05:16:06] 2026-01-09 04:15:31,491 | INFO     | pilot is running in a VM
[2026-01-09 05:16:06] 2026-01-09 04:15:31,491 | INFO     | architecture information:
[2026-01-09 05:16:06] 2026-01-09 04:15:31,501 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:16:06] 2026-01-09 04:15:31,751 | INFO     | cat /etc/os-release:
[2026-01-09 05:16:06] NAME="CentOS Linux"
[2026-01-09 05:16:06] VERSION="7 (Core)"
[2026-01-09 05:16:06] ID="centos"
[2026-01-09 05:16:06] ID_LIKE="rhel fedora"
[2026-01-09 05:16:06] VERSION_ID="7"
[2026-01-09 05:16:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:16:06] ANSI_COLOR="0;31"
[2026-01-09 05:16:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:16:06] HOME_URL="https://www.centos.org/"
[2026-01-09 05:16:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:16:06] 
[2026-01-09 05:16:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:16:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:16:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:16:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:16:06] 
[2026-01-09 05:16:06] 2026-01-09 04:15:31,751 | INFO     | ***************************************
[2026-01-09 05:16:06] 2026-01-09 04:15:32,255 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 05:16:06] 2026-01-09 04:15:32,481 | INFO     | sufficient remaining disk space (496744005632 B)
[2026-01-09 05:16:06] 2026-01-09 04:15:32,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:16:06] 2026-01-09 04:15:32,482 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:16:06] 2026-01-09 04:15:32,482 | INFO     | update_server=False
[2026-01-09 05:16:06] 2026-01-09 04:15:32,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:16:06] 2026-01-09 04:15:32,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:16:06] 2026-01-09 04:15:32,482 | INFO     | aborting loop
[2026-01-09 05:16:06] 2026-01-09 04:15:32,643 | INFO     | all payload control threads have been joined
[2026-01-09 05:16:06] 2026-01-09 04:15:32,869 | INFO     | all data control threads have been joined
[2026-01-09 05:16:06] 2026-01-09 04:15:33,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:16:06] 2026-01-09 04:15:33,477 | INFO     | all job control threads have been joined
[2026-01-09 05:16:06] 2026-01-09 04:15:33,488 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:33,488 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:33,650 | INFO     | [payload] control thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:33,654 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:33,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:16:06] 2026-01-09 04:15:33,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:16:06] 2026-01-09 04:15:33,877 | INFO     | [data] control thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,095 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,288 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,484 | INFO     | [job] control thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,633 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:16:06] 2026-01-09 04:15:34,730 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,735 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,878 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:34,895 | INFO     | [job] validate thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:35,077 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:35,784 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:37,287 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:43,310 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:16:06] 2026-01-09 04:15:44,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:16:06] 2026-01-09 04:15:44,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324377687872)>', '<ExcThread(monitor, started 140323938354944)>']
[2026-01-09 05:16:06] 2026-01-09 04:15:49,463 | INFO     | all workflow threads have been joined
[2026-01-09 05:16:06] 2026-01-09 04:15:49,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:16:06] 2026-01-09 04:15:49,464 | INFO     | traces error code: 0
[2026-01-09 05:16:06] 2026-01-09 04:15:49,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:16:06] 2026-01-09 04:15:59,389 [wrapper] supervise_pilot (15 min periods counter: 26)
[2026-01-09 05:16:06] 2026-01-09 04:16:01,456 | INFO     | PID=6553 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | INFO     | .. there are 2 such processes running
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:16:06] 2026-01-09 04:16:01,457 | INFO     | [monitor] control thread has ended
[2026-01-09 05:16:06] 2026-01-09 04:16:01,631 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:16:06] 2026-01-09 04:16:01,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:16:06] 2026-01-09 04:16:01,683 [wrapper] pilotpid: 6553
[2026-01-09 05:16:06] 2026-01-09 04:16:01,788 [wrapper] Pilot exit status: 0
[2026-01-09 05:16:06] 2026-01-09 04:16:02,324 [wrapper] pandaids: 6963144300
[2026-01-09 05:16:06] 2026-01-09 04:16:03,199 [wrapper] cleanup supervisor_pilot 17021 6554
[2026-01-09 05:16:06] 2026-01-09 04:16:03,294 [wrapper] Test setup, not cleaning
[2026-01-09 05:16:06] 2026-01-09 04:16:03,394 [wrapper] apfmon messages muted
[2026-01-09 05:16:06] 2026-01-09 04:16:03,539 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:16:06] 2026-01-09 04:16:03,662 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:16:06]  *** Error codes and diagnostics ***
[2026-01-09 05:16:06]     "exeErrorCode": 0,
[2026-01-09 05:16:06]     "exeErrorDiag": "",
[2026-01-09 05:16:06]     "pilotErrorCode": 0,
[2026-01-09 05:16:06]     "pilotErrorDiag": "",
[2026-01-09 05:16:06]  *** Listing of results directory ***
[2026-01-09 05:16:06] total 448228
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:22 queuedata.json
[2026-01-09 05:16:06] -rwx------. 1 boinc boinc     36322 Jan  8 13:23 runpilot2-wrapper.sh
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc       100 Jan  8 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:16:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 22:56 run_atlas
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc       105 Jan  8 22:56 job.xml
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc 225939688 Jan  8 22:56 EVNT.47898824._001014.pool.root.1
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc      6390 Jan  8 22:56 init_data.xml
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc     15847 Jan  8 22:56 start_atlas.sh
[2026-01-09 05:16:06] drwxrwx--x. 2 boinc boinc        68 Jan  8 22:56 shared
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc    592397 Jan  8 22:56 input.tar.gz
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc         0 Jan  8 22:56 boinc_lockfile
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc      2518 Jan  8 22:56 pandaJob.out
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc    989845 Jan  8 23:00 agis_schedconf.cvmfs.json
[2026-01-09 05:16:06] drwx------. 5 boinc boinc      4096 Jan  8 23:00 pilot3
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc 222055749 Jan  9 05:12 HITS.47898826._025511.pool.root.1
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc       531 Jan  9 05:12 boinc_task_state.xml
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc      1015 Jan  9 05:13 memory_monitor_summary.json
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc   1516240 Jan  9 05:13 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc    567305 Jan  9 05:13 log.47898826._025511.job.log.tgz.1
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc      7783 Jan  9 05:15 heartbeat.json
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc        95 Jan  9 05:15 pilot_heartbeat.json
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:15 boinc_mmap_file
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:15 wrapper_checkpoint.txt
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc       819 Jan  9 05:16 pilotlog.txt
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc   2978106 Jan  9 05:16 log.47898826._025511.job.log.1
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc       357 Jan  9 05:16 output.list
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:16 runtime_log
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc   3563520 Jan  9 05:16 result.tar.gz
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:16 runtime_log.err
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc       657 Jan  9 05:16 lhIKDmoD4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjMfKDmsKxpRn.diag
[2026-01-09 05:16:06] -rw-r--r--. 1 boinc boinc     20745 Jan  9 05:16 stderr.txt
[2026-01-09 05:16:06] HITS file was successfully produced:
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc 222055749 Jan  9 05:12 shared/HITS.pool.root.1
[2026-01-09 05:16:06]  *** Contents of shared directory: ***
[2026-01-09 05:16:06] total 441576
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc 225939688 Jan  8 22:56 ATLAS.root_0
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc     15847 Jan  8 22:56 start_atlas.sh
[2026-01-09 05:16:06] -rw-r--r--. 2 boinc boinc    592397 Jan  8 22:56 input.tar.gz
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc 222055749 Jan  9 05:12 HITS.pool.root.1
[2026-01-09 05:16:06] -rw-------. 1 boinc boinc   3563520 Jan  9 05:16 result.tar.gz
05:16:07 (2808): run_atlas exited; CPU time 83126.945916
05:16:07 (2808): called boinc_finish(0)

</stderr_txt>
]]>

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