Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:36:25 (29539): wrapper (7.7.26015): starting
11:36:25 (29539): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 11:36:25] Arguments: --nthreads 8
[2026-01-08 11:36:25] Threads: 8
[2026-01-08 11:36:25] Checking for CVMFS
[2026-01-08 11:36:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 11:36:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 11:36:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 11:36:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 11:36:25] 2.11.2.0 1632 28314 101656 154914 2 252 14366665 18432001 1833 130560 0 4709432 99.981 888247 44752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 11:36:25] CVMFS is ok
[2026-01-08 11:36:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:36:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:36:25] Further information can be found at the LHC@home message board.
[2026-01-08 11:36:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:36:25] Checking for apptainer binary...
[2026-01-08 11:36:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 11:36:25] Running /usr/bin/apptainer --version
[2026-01-08 11:36:25] apptainer version 1.3.2-1.el7
[2026-01-08 11:36:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:36:26] c-206-1.aglt2.org
[2026-01-08 11:36:26] apptainer works
[2026-01-08 11:36:26] Set ATHENA_PROC_NUMBER=8
[2026-01-08 11:36:26] Set ATHENA_CORE_NUMBER=8
[2026-01-08 11:36:26] Starting ATLAS job with PandaID=6962920274
[2026-01-08 11:36:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:09:52 (24218): wrapper (7.7.26015): starting
12:09:52 (24218): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 12:09:52] Arguments: --nthreads 8
[2026-01-08 12:09:52] Threads: 8
[2026-01-08 12:09:52] This job has been restarted, cleaning up previous attempt
[2026-01-08 12:09:52] Checking for CVMFS
[2026-01-08 12:09:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 12:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 12:09:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 12:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 12:09:52] 2.11.2.0 1632 28347 98636 154914 0 252 14366936 18432001 1 130560 0 4776664 99.981 888251 44752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-08 12:09:52] CVMFS is ok
[2026-01-08 12:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 12:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 12:09:52] Further information can be found at the LHC@home message board.
[2026-01-08 12:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 12:09:52] Checking for apptainer binary...
[2026-01-08 12:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 12:09:52] Running /usr/bin/apptainer --version
[2026-01-08 12:09:52] apptainer version 1.3.2-1.el7
[2026-01-08 12:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 12:09:53] c-206-1.aglt2.org
[2026-01-08 12:09:53] apptainer works
[2026-01-08 12:09:53] Set ATHENA_PROC_NUMBER=8
[2026-01-08 12:09:53] Set ATHENA_CORE_NUMBER=8
[2026-01-08 12:09:53] Starting ATLAS job with PandaID=6962920274
[2026-01-08 12:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 16:32:38]  *** The last 200 lines of the pilot log: ***
[2026-01-08 16:32:38] 2026-01-08 21:31:45,206 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 16:32:38] 2026-01-08 21:31:45,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 16:32:38] 2026-01-08 21:31:45,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 16:32:38] 2026-01-08 21:31:45,210 | INFO     | fitting pss+swap vs Time
[2026-01-08 16:32:38] 2026-01-08 21:31:45,210 | INFO     | sum of square deviations: 5263458688.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,212 | INFO     | sum of deviations: 43759456539.99999
[2026-01-08 16:32:38] 2026-01-08 21:31:45,212 | INFO     | mean x: 1767900040.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,212 | INFO     | mean y: 2472854.856031128
[2026-01-08 16:32:38] 2026-01-08 21:31:45,212 | INFO     | intersect: -14695532687.359076
[2026-01-08 16:32:38] 2026-01-08 21:31:45,212 | INFO     | chi2: 1.248420673594472
[2026-01-08 16:32:38] 2026-01-08 21:31:45,213 | INFO     | sum of square deviations: 4962187923.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,214 | INFO     | sum of deviations: 42352401382.00001
[2026-01-08 16:32:38] 2026-01-08 21:31:45,214 | INFO     | mean x: 1767899887.5
[2026-01-08 16:32:38] 2026-01-08 21:31:45,214 | INFO     | mean y: 2472142.698412698
[2026-01-08 16:32:38] 2026-01-08 21:31:45,215 | INFO     | intersect: -15086598807.54594
[2026-01-08 16:32:38] 2026-01-08 21:31:45,215 | INFO     | chi2: 1.2488043458072877
[2026-01-08 16:32:38] 2026-01-08 21:31:45,215 | INFO     | current chi2=1.2488043458072877 (change=-0.03073260647879057 %)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,215 | INFO     | right removable region: 251
[2026-01-08 16:32:38] 2026-01-08 21:31:45,215 | INFO     | sum of square deviations: 4962187923.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,217 | INFO     | sum of deviations: 8059610024.500001
[2026-01-08 16:32:38] 2026-01-08 21:31:45,217 | INFO     | mean x: 1767900192.5
[2026-01-08 16:32:38] 2026-01-08 21:31:45,217 | INFO     | mean y: 2490769.5595238097
[2026-01-08 16:32:38] 2026-01-08 21:31:45,217 | INFO     | intersect: -2868941416.179662
[2026-01-08 16:32:38] 2026-01-08 21:31:45,217 | INFO     | chi2: 0.0045838298919411834
[2026-01-08 16:32:38] 2026-01-08 21:31:45,218 | INFO     | current chi2=0.0045838298919411834 (change=99.63282970324872 %)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,218 | INFO     | sum of square deviations: 4672638308.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,219 | INFO     | sum of deviations: 5495051898.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,219 | INFO     | mean x: 1767900345.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,219 | INFO     | mean y: 2492117.056680162
[2026-01-08 16:32:38] 2026-01-08 21:31:45,220 | INFO     | intersect: -2076569754.613252
[2026-01-08 16:32:38] 2026-01-08 21:31:45,220 | INFO     | chi2: 0.001795595171112453
[2026-01-08 16:32:38] 2026-01-08 21:31:45,220 | INFO     | current chi2=0.001795595171112453 (change=60.8276220225955 %)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,220 | INFO     | sum of square deviations: 4394577280.5
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | sum of deviations: 4063436767.5000014
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | mean x: 1767900497.5
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | mean y: 2492900.871900826
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | intersect: -1632192627.2901392
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | chi2: 0.0010032141485854472
[2026-01-08 16:32:38] 2026-01-08 21:31:45,222 | INFO     | current chi2=0.0010032141485854472 (change=44.12915757821345 %)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,223 | INFO     | sum of square deviations: 4127772278.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,224 | INFO     | sum of deviations: 3463495881.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,224 | INFO     | mean x: 1767900650.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,224 | INFO     | mean y: 2493242.670886076
[2026-01-08 16:32:38] 2026-01-08 21:31:45,224 | INFO     | intersect: -1480901723.647123
[2026-01-08 16:32:38] 2026-01-08 21:31:45,225 | INFO     | chi2: 0.000904130840899478
[2026-01-08 16:32:38] 2026-01-08 21:31:45,225 | INFO     | current chi2=0.000904130840899478 (change=9.876585953824385 %)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,225 | INFO     | left removable region: 40
[2026-01-08 16:32:38] 2026-01-08 21:31:45,225 | INFO     | sum of square deviations: 2912836010.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,226 | INFO     | sum of deviations: 2598299757.999999
[2026-01-08 16:32:38] 2026-01-08 21:31:45,226 | INFO     | mean x: 1767901077.0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,226 | INFO     | mean y: 2492953.4312796206
[2026-01-08 16:32:38] 2026-01-08 21:31:45,227 | INFO     | intersect: -1574505176.4898887
[2026-01-08 16:32:38] 2026-01-08 21:31:45,227 | INFO     | chi2: 0.000657974622235933
[2026-01-08 16:32:38] 2026-01-08 21:31:45,227 | INFO     | current memory leak: 0.89 B/s (using 211 data points, chi2=0.00)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,227 | INFO     | could have reported an average CPU frequency of 2397 MHz (12 samples)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | ..............................
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . Timing measurements:
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . get job = 0 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . initial setup = 1 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . payload setup = 6 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . stage-in = 0 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . payload execution = 15666 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . stage-out = 1 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | . log creation = 0 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,228 | INFO     | ..............................
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | 
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | job summary report
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | --------------------------------------------------
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | PanDA job id: 6962920274
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | task id: 47898826
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | errors: (none)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 16:32:38] 2026-01-08 21:31:45,372 | INFO     | pilot state: finished 
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | transexitcode: 0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | exeerrorcode: 0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | exeerrordiag: 
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | exitcode: 0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | exitmsg: OK
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | cpuconsumptiontime: 121210 s
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | nevents: 400
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | neventsw: 0
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | pid: 23142
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | pgrp: 23142
[2026-01-08 16:32:38] 2026-01-08 21:31:45,373 | INFO     | corecount: 8
[2026-01-08 16:32:38] 2026-01-08 21:31:45,374 | INFO     | event service: False
[2026-01-08 16:32:38] 2026-01-08 21:31:45,374 | INFO     | sizes: {0: 2283141, 1: 2283997, 5: 2284259, 12: 2284315, 15676: 2315554, 15679: 2324552, 15680: 2324736, 15683: 2324930}
[2026-01-08 16:32:38] 2026-01-08 21:31:45,374 | INFO     | --------------------------------------------------
[2026-01-08 16:32:38] 2026-01-08 21:31:45,374 | INFO     | 
[2026-01-08 16:32:38] 2026-01-08 21:31:45,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | job 6962920274 has completed (purged errors)
[2026-01-08 16:32:38] 2026-01-08 21:31:45,391 | INFO     | overall cleanup function is called
[2026-01-08 16:32:38] 2026-01-08 21:31:46,398 | INFO     | --- collectZombieJob: --- 10, [23142]
[2026-01-08 16:32:38] 2026-01-08 21:31:46,398 | INFO     | zombie collector waiting for pid 23142
[2026-01-08 16:32:38] 2026-01-08 21:31:46,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 16:32:38] 2026-01-08 21:31:46,398 | INFO     | collected zombie processes
[2026-01-08 16:32:38] 2026-01-08 21:31:46,399 | INFO     | will attempt to kill all subprocesses of pid=23142
[2026-01-08 16:32:38] 2026-01-08 21:31:46,499 | INFO     | process IDs to be killed: [23142] (in reverse order)
[2026-01-08 16:32:38] 2026-01-08 21:31:46,536 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 16:32:38] 2026-01-08 21:31:46,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 16:32:38] 2026-01-08 21:31:46,538 | INFO     | did not find any defunct processes belonging to 23142
[2026-01-08 16:32:38] 2026-01-08 21:31:46,541 | INFO     | did not find any defunct processes belonging to 23142
[2026-01-08 16:32:38] 2026-01-08 21:31:46,541 | INFO     | ready for new job
[2026-01-08 16:32:38] 2026-01-08 21:31:46,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 16:32:38] 2026-01-08 21:31:46,543 | INFO     | ***************************************
[2026-01-08 16:32:38] 2026-01-08 21:31:46,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 16:32:38] 2026-01-08 21:31:46,543 | INFO     | ***************************************
[2026-01-08 16:32:38] 2026-01-08 21:31:46,543 | INFO     | 
[2026-01-08 16:32:38] 2026-01-08 21:31:46,544 | INFO     | architecture information:
[2026-01-08 16:32:38] 2026-01-08 21:31:46,544 | INFO     | executing command: cat /etc/os-release
[2026-01-08 16:32:38] 2026-01-08 21:31:46,556 | INFO     | cat /etc/os-release:
[2026-01-08 16:32:38] NAME="CentOS Linux"
[2026-01-08 16:32:38] VERSION="7 (Core)"
[2026-01-08 16:32:38] ID="centos"
[2026-01-08 16:32:38] ID_LIKE="rhel fedora"
[2026-01-08 16:32:38] VERSION_ID="7"
[2026-01-08 16:32:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 16:32:38] ANSI_COLOR="0;31"
[2026-01-08 16:32:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 16:32:38] HOME_URL="https://www.centos.org/"
[2026-01-08 16:32:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 16:32:38] 
[2026-01-08 16:32:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 16:32:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 16:32:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 16:32:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 16:32:38] 
[2026-01-08 16:32:38] 2026-01-08 21:31:46,556 | INFO     | ***************************************
[2026-01-08 16:32:38] 2026-01-08 21:31:47,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 16:32:38] 2026-01-08 21:31:47,071 | INFO     | sufficient remaining disk space (28532801536 B)
[2026-01-08 16:32:38] 2026-01-08 21:31:47,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 16:32:38] 2026-01-08 21:31:47,071 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 16:32:38] 2026-01-08 21:31:47,071 | INFO     | update_server=False
[2026-01-08 16:32:38] 2026-01-08 21:31:47,072 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 16:32:38] 2026-01-08 21:31:47,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:32:38] 2026-01-08 21:31:47,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 16:32:38] 2026-01-08 21:31:47,256 | INFO     | all payload control threads have been joined
[2026-01-08 16:32:38] 2026-01-08 21:31:47,749 | INFO     | all job control threads have been joined
[2026-01-08 16:32:38] 2026-01-08 21:31:47,897 | INFO     | all data control threads have been joined
[2026-01-08 16:32:38] 2026-01-08 21:31:47,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 16:32:38] 2026-01-08 21:31:47,933 | INFO     | aborting loop
[2026-01-08 16:32:38] 2026-01-08 21:31:47,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 16:32:38] 2026-01-08 21:31:48,076 | INFO     | [job] retrieve thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,077 | INFO     | [job] queue monitor thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,261 | INFO     | [payload] control thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,283 | INFO     | [payload] failed_post thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,727 | INFO     | [payload] validate_post thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,754 | INFO     | [job] control thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,902 | INFO     | [data] control thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:48,938 | INFO     | [job] job monitor thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,001 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,078 | INFO     | [data] copytool_out thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,159 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,237 | INFO     | [job] validate thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,350 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,352 | INFO     | [data] copytool_in thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:49,394 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:31:51,967 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 16:32:38] 2026-01-08 21:32:18,013 | INFO     | PID=3501 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 16:32:38] 2026-01-08 21:32:18,014 | INFO     | .. there are 3 such processes running
[2026-01-08 16:32:38] 2026-01-08 21:32:18,014 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 16:32:38] 2026-01-08 21:32:18,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 16:32:38] 2026-01-08 21:32:18,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 16:32:38] 2026-01-08 21:32:31,559 | INFO     | [monitor] cgroup control has ended
[2026-01-08 16:32:38] 2026-01-08 21:32:32,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315876050752)>', '<ExcThread(monitor, started 140315281311488)>']
[2026-01-08 16:32:38] 2026-01-08 21:32:33,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 16:32:38] 2026-01-08 21:32:33,083 | INFO     | [monitor] control thread has ended
[2026-01-08 16:32:38] 2026-01-08 21:32:37,989 | INFO     | all workflow threads have been joined
[2026-01-08 16:32:38] 2026-01-08 21:32:37,989 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 16:32:38] 2026-01-08 21:32:37,989 | INFO     | traces error code: 0
[2026-01-08 16:32:38] 2026-01-08 21:32:37,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 16:32:38] 2026-01-08 21:32:38,073 [wrapper] ==== pilot stdout END ====
[2026-01-08 16:32:38] 2026-01-08 21:32:38,076 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 16:32:38] 2026-01-08 21:32:38,078 [wrapper] pilotpid: 3501
[2026-01-08 16:32:38] 2026-01-08 21:32:38,080 [wrapper] Pilot exit status: 0
[2026-01-08 16:32:38] 2026-01-08 21:32:38,088 [wrapper] pandaids: 6962920274 6962920274
[2026-01-08 16:32:38] 2026-01-08 21:32:38,115 [wrapper] cleanup supervisor_pilot  5542 3502
[2026-01-08 16:32:38] 2026-01-08 21:32:38,118 [wrapper] Test setup, not cleaning
[2026-01-08 16:32:38] 2026-01-08 21:32:38,120 [wrapper] apfmon messages muted
[2026-01-08 16:32:38] 2026-01-08 21:32:38,123 [wrapper] ==== wrapper stdout END ====
[2026-01-08 16:32:38] 2026-01-08 21:32:38,125 [wrapper] ==== wrapper stderr END ====
[2026-01-08 16:32:38]  *** Error codes and diagnostics ***
[2026-01-08 16:32:38]     "exeErrorCode": 0,
[2026-01-08 16:32:38]     "exeErrorDiag": "",
[2026-01-08 16:32:38]     "pilotErrorCode": 0,
[2026-01-08 16:32:38]     "pilotErrorDiag": "",
[2026-01-08 16:32:38]  *** Listing of results directory ***
[2026-01-08 16:32:38] total 660056
[2026-01-08 16:32:38] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-08 16:32:38] -rwx------ 1 boincer umatlas     36322 Jan  8 03:07 runpilot2-wrapper.sh
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 03:11 queuedata.json
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 03:11 pilot3.tar.gz
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas       100 Jan  8 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 16:32:38] -rwxr-xr-x 1 boincer umatlas      7986 Jan  8 11:36 run_atlas
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas       105 Jan  8 11:36 job.xml
[2026-01-08 16:32:38] -rw-r--r-- 3 boincer umatlas 221867781 Jan  8 11:36 EVNT.47898824._000831.pool.root.1
[2026-01-08 16:32:38] -rw-r--r-- 3 boincer umatlas 221867781 Jan  8 11:36 ATLAS.root_0
[2026-01-08 16:32:38] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:36 start_atlas.sh
[2026-01-08 16:32:38] drwxrwx--x 2 boincer umatlas      4096 Jan  8 11:36 shared
[2026-01-08 16:32:38] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 11:36 input.tar.gz
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas         0 Jan  8 11:36 boinc_lockfile
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas      2519 Jan  8 12:09 pandaJob.out
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas        57 Jan  8 12:09 setup.sh.local
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas    989837 Jan  8 12:10 agis_schedconf.cvmfs.json
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas      5952 Jan  8 16:28 init_data.xml
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas 222933164 Jan  8 16:31 HITS.47898826._021879.pool.root.1
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas       531 Jan  8 16:31 boinc_task_state.xml
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas      1068 Jan  8 16:31 memory_monitor_summary.json
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas   1516240 Jan  8 16:31 agis_ddmendpoints.agis.ALL.json
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas    475712 Jan  8 16:31 log.47898826._021879.job.log.tgz.1
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas      7854 Jan  8 16:31 heartbeat.json
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas        29 Jan  8 16:32 wrapper_checkpoint.txt
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas      8192 Jan  8 16:32 boinc_mmap_file
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas        96 Jan  8 16:32 pilot_heartbeat.json
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas      4820 Jan  8 16:32 pilotlog.txt
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas   2180927 Jan  8 16:32 log.47898826._021879.job.log.1
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas       357 Jan  8 16:32 output.list
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas       620 Jan  8 16:32 runtime_log
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas   2672640 Jan  8 16:32 result.tar.gz
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas       786 Jan  8 16:32 VZrLDmwE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4xjKDmjTwYNo.diag
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas      9423 Jan  8 16:32 runtime_log.err
[2026-01-08 16:32:38] -rw-r--r-- 1 boincer umatlas     23048 Jan  8 16:32 stderr.txt
[2026-01-08 16:32:38] HITS file was successfully produced:
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas 222933164 Jan  8 16:31 shared/HITS.pool.root.1
[2026-01-08 16:32:38]  *** Contents of shared directory: ***
[2026-01-08 16:32:38] total 437592
[2026-01-08 16:32:38] -rw-r--r-- 3 boincer umatlas 221867781 Jan  8 11:36 ATLAS.root_0
[2026-01-08 16:32:38] -rw-r--r-- 2 boincer umatlas     15847 Jan  8 11:36 start_atlas.sh
[2026-01-08 16:32:38] -rw-r--r-- 2 boincer umatlas    592398 Jan  8 11:36 input.tar.gz
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas 222933164 Jan  8 16:31 HITS.pool.root.1
[2026-01-08 16:32:38] -rw------- 1 boincer umatlas   2672640 Jan  8 16:32 result.tar.gz
16:32:39 (24218): run_atlas exited; CPU time 121427.815698
16:32:39 (24218): called boinc_finish(0)

</stderr_txt>
]]>

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