Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:14 (20159): wrapper (7.7.26015): starting
23:27:14 (20159): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:27:14] Arguments: --nthreads 8
[2026-01-08 23:27:14] Threads: 8
[2026-01-08 23:27:14] Checking for CVMFS
[2026-01-08 23:27:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:27:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:27:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:27:17] 2.11.2.0 31595 34573 97156 154922 3 60 20301514 25165824 96 130560 0 16181155 99.850 7943052 2896 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 23:27:17] CVMFS is ok
[2026-01-08 23:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:27:17] Checking for apptainer binary...
[2026-01-08 23:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:27:17] Running /usr/bin/apptainer --version
[2026-01-08 23:27:17] apptainer version 1.3.2-1.el7
[2026-01-08 23:27:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:27:31] cg-vwn421.simple-grid.lan
[2026-01-08 23:27:31] apptainer works
[2026-01-08 23:27:31] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:27:31] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:27:31] Starting ATLAS job with PandaID=6963144056
[2026-01-08 23:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:26:49]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:26:49] 2026-01-09 03:25:51,679 | INFO     | time since job start (17622s) is within the limit (174528.0s)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,914 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 04:26:49] 2026-01-09 03:25:51,915 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 04:26:49] 2026-01-09 03:25:51,917 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6963144056/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,917 | INFO     | extracted standard info from prmon json
[2026-01-09 04:26:49] 2026-01-09 03:25:51,917 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:26:49] 2026-01-09 03:25:51,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:26:49] 2026-01-09 03:25:51,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:26:49] 2026-01-09 03:25:51,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:26:49] 2026-01-09 03:25:51,928 | INFO     | fitting pss+swap vs Time
[2026-01-09 04:26:49] 2026-01-09 03:25:51,929 | INFO     | sum of square deviations: 6734191380.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,932 | INFO     | sum of deviations: 125641003623.99995
[2026-01-09 04:26:49] 2026-01-09 03:25:51,932 | INFO     | mean x: 1767920536.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,932 | INFO     | mean y: 2437637.139784946
[2026-01-09 04:26:49] 2026-01-09 03:25:51,932 | INFO     | intersect: -32981969537.596603
[2026-01-09 04:26:49] 2026-01-09 03:25:51,933 | INFO     | chi2: 7.2768602844089605
[2026-01-09 04:26:49] 2026-01-09 03:25:51,933 | INFO     | sum of square deviations: 6378584712.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,936 | INFO     | sum of deviations: 141431904013.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,936 | INFO     | mean x: 1767920383.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,936 | INFO     | mean y: 2444293.813868613
[2026-01-09 04:26:49] 2026-01-09 03:25:51,937 | INFO     | intersect: -39197528310.2471
[2026-01-09 04:26:49] 2026-01-09 03:25:51,937 | INFO     | chi2: 6.563425204977746
[2026-01-09 04:26:49] 2026-01-09 03:25:51,937 | INFO     | current chi2=6.563425204977746 (change=9.804160744432384 %)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,937 | INFO     | right removable region: 273
[2026-01-09 04:26:49] 2026-01-09 03:25:51,938 | INFO     | sum of square deviations: 6378584712.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,940 | INFO     | sum of deviations: 29667915195.499996
[2026-01-09 04:26:49] 2026-01-09 03:25:51,940 | INFO     | mean x: 1767920688.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,940 | INFO     | mean y: 2478764.8503649635
[2026-01-09 04:26:49] 2026-01-09 03:25:51,941 | INFO     | intersect: -8220430144.080734
[2026-01-09 04:26:49] 2026-01-09 03:25:51,941 | INFO     | chi2: 2.543460544358151
[2026-01-09 04:26:49] 2026-01-09 03:25:51,941 | INFO     | current chi2=2.543460544358151 (change=65.04728076465007 %)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,942 | INFO     | sum of square deviations: 6035722470.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,944 | INFO     | sum of deviations: -25071218624.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,944 | INFO     | mean x: 1767920841.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,944 | INFO     | mean y: 2503023.565055762
[2026-01-09 04:26:49] 2026-01-09 03:25:51,944 | INFO     | intersect: 7346102755.816652
[2026-01-09 04:26:49] 2026-01-09 03:25:51,945 | INFO     | chi2: 0.911596101042236
[2026-01-09 04:26:49] 2026-01-09 03:25:51,945 | INFO     | current chi2=0.911596101042236 (change=64.15921988393653 %)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,945 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,948 | INFO     | sum of deviations: -26039286519.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,948 | INFO     | mean x: 1767920993.5
[2026-01-09 04:26:49] 2026-01-09 03:25:51,948 | INFO     | mean y: 2503433.875
[2026-01-09 04:26:49] 2026-01-09 03:25:51,948 | INFO     | intersect: 8071285025.574061
[2026-01-09 04:26:49] 2026-01-09 03:25:51,949 | INFO     | chi2: 0.8811441570807386
[2026-01-09 04:26:49] 2026-01-09 03:25:51,949 | INFO     | current chi2=0.8811441570807386 (change=3.3405083596432057 %)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,949 | INFO     | left removable region: 30
[2026-01-09 04:26:49] 2026-01-09 03:25:51,949 | INFO     | sum of square deviations: 4449281562.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,952 | INFO     | sum of deviations: 9963808442.000002
[2026-01-09 04:26:49] 2026-01-09 03:25:51,952 | INFO     | mean x: 1767921268.0
[2026-01-09 04:26:49] 2026-01-09 03:25:51,952 | INFO     | mean y: 2502276.255144033
[2026-01-09 04:26:49] 2026-01-09 03:25:51,952 | INFO     | intersect: -3956615304.7350583
[2026-01-09 04:26:49] 2026-01-09 03:25:51,952 | INFO     | chi2: 0.0017335195900731117
[2026-01-09 04:26:49] 2026-01-09 03:25:51,953 | INFO     | current memory leak: 2.24 B/s (using 243 data points, chi2=0.00)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,953 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-09 04:26:49] 2026-01-09 03:25:51,953 | INFO     | ..............................
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . Timing measurements:
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . get job = 0 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . initial setup = 10 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . payload setup = 145 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . stage-in = 0 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . payload execution = 17140 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . stage-out = 3 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | . log creation = 1 s
[2026-01-09 04:26:49] 2026-01-09 03:25:51,954 | INFO     | ..............................
[2026-01-09 04:26:49] 2026-01-09 03:25:52,075 | INFO     | 
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | job summary report
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | --------------------------------------------------
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | PanDA job id: 6963144056
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | task id: 47898826
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | errors: (none)
[2026-01-09 04:26:49] 2026-01-09 03:25:52,076 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | pilot state: finished 
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | transexitcode: 0
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | exeerrorcode: 0
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | exeerrordiag: 
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | exitcode: 0
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | exitmsg: OK
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | cpuconsumptiontime: 81097 s
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | nevents: 400
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | neventsw: 0
[2026-01-09 04:26:49] 2026-01-09 03:25:52,077 | INFO     | pid: 30328
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | pgrp: 30328
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | corecount: 8
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | event service: False
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 24: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 67: 2284321, 77: 2284349, 88: 2284405, 99: 2285003, 10
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | --------------------------------------------------
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | 
[2026-01-09 04:26:49] 2026-01-09 03:25:52,078 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-01-09 04:26:49] 2026-01-09 03:25:52,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,489 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:26:49] 2026-01-09 03:25:52,493 | INFO     | job 6963144056 has completed (purged errors)
[2026-01-09 04:26:49] 2026-01-09 03:25:52,493 | INFO     | overall cleanup function is called
[2026-01-09 04:26:49] 2026-01-09 03:25:53,502 | INFO     | --- collectZombieJob: --- 10, [30328]
[2026-01-09 04:26:49] 2026-01-09 03:25:53,502 | INFO     | zombie collector waiting for pid 30328
[2026-01-09 04:26:49] 2026-01-09 03:25:53,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:26:49] 2026-01-09 03:25:53,502 | INFO     | collected zombie processes
[2026-01-09 04:26:49] 2026-01-09 03:25:53,502 | INFO     | will attempt to kill all subprocesses of pid=30328
[2026-01-09 04:26:49] 2026-01-09 03:25:53,613 | INFO     | process IDs to be killed: [30328] (in reverse order)
[2026-01-09 04:26:49] 2026-01-09 03:25:54,784 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:26:49] 2026-01-09 03:25:54,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:26:49] 2026-01-09 03:25:54,787 | INFO     | did not find any defunct processes belonging to 30328
[2026-01-09 04:26:49] 2026-01-09 03:25:54,788 | INFO     | did not find any defunct processes belonging to 30328
[2026-01-09 04:26:49] 2026-01-09 03:25:54,789 | INFO     | ready for new job
[2026-01-09 04:26:49] 2026-01-09 03:25:54,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:26:49] 2026-01-09 03:25:54,791 | INFO     | ***************************************
[2026-01-09 04:26:49] 2026-01-09 03:25:54,791 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:26:49] 2026-01-09 03:25:54,791 | INFO     | ***************************************
[2026-01-09 04:26:49] 2026-01-09 03:25:54,791 | INFO     | 
[2026-01-09 04:26:49] 2026-01-09 03:25:54,792 | INFO     | pilot is running in a VM
[2026-01-09 04:26:49] 2026-01-09 03:25:54,792 | INFO     | architecture information:
[2026-01-09 04:26:49] 2026-01-09 03:25:54,811 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:26:49] 2026-01-09 03:25:55,165 | INFO     | cat /etc/os-release:
[2026-01-09 04:26:49] NAME="CentOS Linux"
[2026-01-09 04:26:49] VERSION="7 (Core)"
[2026-01-09 04:26:49] ID="centos"
[2026-01-09 04:26:49] ID_LIKE="rhel fedora"
[2026-01-09 04:26:49] VERSION_ID="7"
[2026-01-09 04:26:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:26:49] ANSI_COLOR="0;31"
[2026-01-09 04:26:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:26:49] HOME_URL="https://www.centos.org/"
[2026-01-09 04:26:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:26:49] 
[2026-01-09 04:26:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:26:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:26:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:26:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:26:49] 
[2026-01-09 04:26:49] 2026-01-09 03:25:55,166 | INFO     | ***************************************
[2026-01-09 04:26:49] 2026-01-09 03:25:55,669 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-01-09 04:26:49] 2026-01-09 03:25:55,844 | INFO     | sufficient remaining disk space (497481154560 B)
[2026-01-09 04:26:49] 2026-01-09 03:25:55,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:26:49] 2026-01-09 03:25:55,845 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:26:49] 2026-01-09 03:25:55,845 | INFO     | update_server=False
[2026-01-09 04:26:49] 2026-01-09 03:25:55,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:26:49] 2026-01-09 03:25:55,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:26:49] 2026-01-09 03:25:56,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:26:49] 2026-01-09 03:25:56,250 | INFO     | aborting loop
[2026-01-09 04:26:49] 2026-01-09 03:25:56,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:26:49] 2026-01-09 03:25:56,638 | INFO     | all data control threads have been joined
[2026-01-09 04:26:49] 2026-01-09 03:25:56,754 | INFO     | all payload control threads have been joined
[2026-01-09 04:26:49] 2026-01-09 03:25:56,851 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,001 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,062 | INFO     | all job control threads have been joined
[2026-01-09 04:26:49] 2026-01-09 03:25:57,071 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:26:49] 2026-01-09 03:25:57,241 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,256 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,260 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,605 | INFO     | [job] validate thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,644 | INFO     | [data] control thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:57,760 | INFO     | [payload] control thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,052 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,068 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,069 | INFO     | [job] control thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,096 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,276 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:58,419 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:25:59,859 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:26:49] 2026-01-09 03:26:24,841 | INFO     | PID=23880 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 04:26:49] 2026-01-09 03:26:24,841 | INFO     | .. there are 2 such processes running
[2026-01-09 04:26:49] 2026-01-09 03:26:24,841 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:26:49] 2026-01-09 03:26:24,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:26:49] 2026-01-09 03:26:24,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:26:49] 2026-01-09 03:26:39,034 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:26:49] 2026-01-09 03:26:39,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157824661312)>', '<ExcThread(monitor, started 140157223151360)>']
[2026-01-09 04:26:49] 2026-01-09 03:26:39,930 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:26:49] 2026-01-09 03:26:39,931 | INFO     | [monitor] control thread has ended
[2026-01-09 04:26:49] 2026-01-09 03:26:44,209 | INFO     | all workflow threads have been joined
[2026-01-09 04:26:49] 2026-01-09 03:26:44,209 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:26:49] 2026-01-09 03:26:44,209 | INFO     | traces error code: 0
[2026-01-09 04:26:49] 2026-01-09 03:26:44,209 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:26:49] 2026-01-09 03:26:44,671 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:26:49] 2026-01-09 03:26:44,794 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:26:49] 2026-01-09 03:26:44,899 [wrapper] pilotpid: 23880
[2026-01-09 04:26:49] 2026-01-09 03:26:45,004 [wrapper] Pilot exit status: 0
[2026-01-09 04:26:49] 2026-01-09 03:26:45,526 [wrapper] pandaids: 6963144056
[2026-01-09 04:26:49] 2026-01-09 03:26:46,517 [wrapper] cleanup supervisor_pilot  7848 23881
[2026-01-09 04:26:49] 2026-01-09 03:26:46,638 [wrapper] Test setup, not cleaning
[2026-01-09 04:26:49] 2026-01-09 03:26:46,715 [wrapper] apfmon messages muted
[2026-01-09 04:26:49] 2026-01-09 03:26:46,759 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:26:49] 2026-01-09 03:26:46,893 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:26:49]  *** Error codes and diagnostics ***
[2026-01-09 04:26:49]     "exeErrorCode": 0,
[2026-01-09 04:26:49]     "exeErrorDiag": "",
[2026-01-09 04:26:49]     "pilotErrorCode": 0,
[2026-01-09 04:26:49]     "pilotErrorDiag": "",
[2026-01-09 04:26:49]  *** Listing of results directory ***
[2026-01-09 04:26:49] total 451492
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:22 queuedata.json
[2026-01-09 04:26:49] -rwx------. 1 boinc boinc     36322 Jan  8 13:22 runpilot2-wrapper.sh
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:26:49] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:27 run_atlas
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:27 job.xml
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc      6390 Jan  8 23:27 init_data.xml
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc 227960332 Jan  8 23:27 EVNT.47898824._001005.pool.root.1
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:27 start_atlas.sh
[2026-01-09 04:26:49] drwxrwx--x. 2 boinc boinc        68 Jan  8 23:27 shared
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc    592393 Jan  8 23:27 input.tar.gz
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:27 boinc_lockfile
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc      2518 Jan  8 23:27 pandaJob.out
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc    989837 Jan  8 23:32 agis_schedconf.cvmfs.json
[2026-01-09 04:26:49] drwx------. 5 boinc boinc      4096 Jan  8 23:32 pilot3
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc 224746602 Jan  9 04:22 HITS.47898826._025280.pool.root.1
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc       531 Jan  9 04:22 boinc_task_state.xml
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc      1022 Jan  9 04:23 memory_monitor_summary.json
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc   1516240 Jan  9 04:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc    498693 Jan  9 04:23 log.47898826._025280.job.log.tgz.1
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc        95 Jan  9 04:25 pilot_heartbeat.json
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc      7786 Jan  9 04:25 heartbeat.json
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc      8192 Jan  9 04:26 boinc_mmap_file
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc        28 Jan  9 04:26 wrapper_checkpoint.txt
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc      4885 Jan  9 04:26 pilotlog.txt
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc   2363501 Jan  9 04:26 log.47898826._025280.job.log.1
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc       357 Jan  9 04:26 output.list
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc       620 Jan  9 04:26 runtime_log
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc   2877440 Jan  9 04:26 result.tar.gz
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc       657 Jan  9 04:26 ygBLDmbD4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOLfKDmqt1FPn.diag
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc      8833 Jan  9 04:26 runtime_log.err
[2026-01-09 04:26:49] -rw-r--r--. 1 boinc boinc     20762 Jan  9 04:26 stderr.txt
[2026-01-09 04:26:49] HITS file was successfully produced:
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc 224746602 Jan  9 04:22 shared/HITS.pool.root.1
[2026-01-09 04:26:49]  *** Contents of shared directory: ***
[2026-01-09 04:26:49] total 445508
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc 227960332 Jan  8 23:27 ATLAS.root_0
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:27 start_atlas.sh
[2026-01-09 04:26:49] -rw-r--r--. 2 boinc boinc    592393 Jan  8 23:27 input.tar.gz
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc 224746602 Jan  9 04:22 HITS.pool.root.1
[2026-01-09 04:26:49] -rw-------. 1 boinc boinc   2877440 Jan  9 04:26 result.tar.gz
04:26:51 (20159): run_atlas exited; CPU time 81275.304982
04:26:51 (20159): called boinc_finish(0)

</stderr_txt>
]]>

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