Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:08 (531663): wrapper (7.7.26015): starting
01:37:08 (531663): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 01:37:08] Arguments: --nthreads 4
[2026-01-10 01:37:08] Threads: 4
[2026-01-10 01:37:08] Checking for CVMFS
[2026-01-10 01:37:08] No cvmfs_config command found, will try listing directly
[2026-01-10 01:37:08] CVMFS is ok
[2026-01-10 01:37:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:37:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:37:08] Further information can be found at the LHC@home message board.
[2026-01-10 01:37:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:37:08] Checking for apptainer binary...
[2026-01-10 01:37:08] which: no apptainer in ((null))
[2026-01-10 01:37:08] apptainer is not installed, using version from CVMFS
[2026-01-10 01:37:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:37:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-10 01:37:09] apptainer works
[2026-01-10 01:37:09] Set ATHENA_PROC_NUMBER=4
[2026-01-10 01:37:09] Set ATHENA_CORE_NUMBER=4
[2026-01-10 01:37:09] Starting ATLAS job with PandaID=6962920237
[2026-01-10 01:37:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:35:44]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:35:44] 2026-01-10 04:32:08,180 | INFO     | time since job start (14085s) is within the limit (174528.0s)
[2026-01-10 05:35:44] 2026-01-10 04:32:08,972 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 05:35:44] 2026-01-10 04:32:08,993 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2680.9546562500013
[2026-01-10 05:35:44] 2026-01-10 04:32:09,019 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962920237/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,019 | INFO     | extracted standard info from prmon json
[2026-01-10 05:35:44] 2026-01-10 04:32:09,019 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:35:44] 2026-01-10 04:32:09,019 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:35:44] 2026-01-10 04:32:09,020 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:35:44] 2026-01-10 04:32:09,020 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:35:44] 2026-01-10 04:32:09,024 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:35:44] 2026-01-10 04:32:09,024 | INFO     | sum of square deviations: 3822156546.9610333
[2026-01-10 05:35:44] 2026-01-10 04:32:09,026 | INFO     | sum of deviations: -22981407137.857155
[2026-01-10 05:35:44] 2026-01-10 04:32:09,026 | INFO     | mean x: 1768012492.012987
[2026-01-10 05:35:44] 2026-01-10 04:32:09,026 | INFO     | mean y: 2352763.285714286
[2026-01-10 05:35:44] 2026-01-10 04:32:09,026 | INFO     | intersect: 10632847460.336674
[2026-01-10 05:35:44] 2026-01-10 04:32:09,027 | INFO     | chi2: 1.9937236206711684
[2026-01-10 05:35:44] 2026-01-10 04:32:09,027 | INFO     | sum of square deviations: 3579297094.460173
[2026-01-10 05:35:44] 2026-01-10 04:32:09,028 | INFO     | sum of deviations: -9357631575.99999
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | mean x: 1768012339.5132744
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | mean y: 2361171.5
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | intersect: 4624611758.24048
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | chi2: 1.3350862534303647
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | current chi2=1.3350862534303647 (change=33.0355401527058 %)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,029 | INFO     | sum of square deviations: 3346949466.959273
[2026-01-10 05:35:44] 2026-01-10 04:32:09,031 | INFO     | sum of deviations: -9278541114.248869
[2026-01-10 05:35:44] 2026-01-10 04:32:09,031 | INFO     | mean x: 1768012187.0135746
[2026-01-10 05:35:44] 2026-01-10 04:32:09,031 | INFO     | mean y: 2361223.4162895926
[2026-01-10 05:35:44] 2026-01-10 04:32:09,031 | INFO     | intersect: 4903712119.102858
[2026-01-10 05:35:44] 2026-01-10 04:32:09,031 | INFO     | chi2: 1.3340914268532935
[2026-01-10 05:35:44] 2026-01-10 04:32:09,032 | INFO     | current chi2=1.3340914268532935 (change=0.07451403042425685 %)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,032 | INFO     | right removable region: 220
[2026-01-10 05:35:44] 2026-01-10 04:32:09,032 | INFO     | sum of square deviations: 3579295264.460173
[2026-01-10 05:35:44] 2026-01-10 04:32:09,033 | INFO     | sum of deviations: -44181821703.38052
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | mean x: 1768012644.5132744
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | mean y: 2365842.9601769913
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | intersect: 21826220444.96069
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | chi2: 0.822547712000703
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | current chi2=0.822547712000703 (change=58.74314255634891 %)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,034 | INFO     | sum of square deviations: 3346945806.959273
[2026-01-10 05:35:44] 2026-01-10 04:32:09,036 | INFO     | sum of deviations: -35450217086.1403
[2026-01-10 05:35:44] 2026-01-10 04:32:09,036 | INFO     | mean x: 1768012797.0135746
[2026-01-10 05:35:44] 2026-01-10 04:32:09,036 | INFO     | mean y: 2360133.380090498
[2026-01-10 05:35:44] 2026-01-10 04:32:09,036 | INFO     | intersect: 18728817351.445225
[2026-01-10 05:35:44] 2026-01-10 04:32:09,037 | INFO     | chi2: 0.7850596452464708
[2026-01-10 05:35:44] 2026-01-10 04:32:09,037 | INFO     | current chi2=0.7850596452464708 (change=4.557555289169679 %)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,037 | INFO     | left removable region: 20
[2026-01-10 05:35:44] 2026-01-10 04:32:09,037 | INFO     | sum of square deviations: 2480622769.9550056
[2026-01-10 05:35:44] 2026-01-10 04:32:09,038 | INFO     | sum of deviations: -12349011931.090012
[2026-01-10 05:35:44] 2026-01-10 04:32:09,038 | INFO     | mean x: 1768012766.515
[2026-01-10 05:35:44] 2026-01-10 04:32:09,038 | INFO     | mean y: 2362040.03
[2026-01-10 05:35:44] 2026-01-10 04:32:09,038 | INFO     | intersect: 8803865844.822218
[2026-01-10 05:35:44] 2026-01-10 04:32:09,039 | INFO     | chi2: 0.08885999847929917
[2026-01-10 05:35:44] 2026-01-10 04:32:09,039 | INFO     | current memory leak: -4.98 B/s (using 200 data points, chi2=0.09)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,039 | INFO     | could have reported an average CPU frequency of 2692 MHz (11 samples)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,039 | INFO     | ..............................
[2026-01-10 05:35:44] 2026-01-10 04:32:09,039 | INFO     | . Timing measurements:
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . get job = 0 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . initial setup = 1 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . payload setup = 9 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . stage-in = 0 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . payload execution = 14042 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . stage-out = 1 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | . log creation = 0 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,040 | INFO     | ..............................
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | 
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | job summary report
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | --------------------------------------------------
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | PanDA job id: 6962920237
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | task id: 47898826
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | errors: (none)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:35:44] 2026-01-10 04:32:09,132 | INFO     | pilot state: finished 
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | transexitcode: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | exeerrorcode: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | exeerrordiag: 
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | exitcode: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | exitmsg: OK
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | cpuconsumptiontime: 53609 s
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | nevents: 400
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | neventsw: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | pid: 543210
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | pgrp: 543210
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | corecount: 4
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | event service: False
[2026-01-10 05:35:44] 2026-01-10 04:32:09,133 | INFO     | sizes: {0: 2283141, 1: 2284009, 8: 2284271, 12: 2284299, 14055: 2315324, 14057: 2324346, 14058: 2324530, 14068: 2324724}
[2026-01-10 05:35:44] 2026-01-10 04:32:09,134 | INFO     | --------------------------------------------------
[2026-01-10 05:35:44] 2026-01-10 04:32:09,134 | INFO     | 
[2026-01-10 05:35:44] 2026-01-10 04:32:09,134 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-10 05:35:44] 2026-01-10 04:32:09,169 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,169 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,169 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | job 6962920237 has completed (purged errors)
[2026-01-10 05:35:44] 2026-01-10 04:32:09,171 | INFO     | overall cleanup function is called
[2026-01-10 05:35:44] 2026-01-10 04:32:10,180 | INFO     | --- collectZombieJob: --- 10, [543210]
[2026-01-10 05:35:44] 2026-01-10 04:32:10,180 | INFO     | zombie collector waiting for pid 543210
[2026-01-10 05:35:44] 2026-01-10 04:32:10,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:35:44] 2026-01-10 04:32:10,181 | INFO     | collected zombie processes
[2026-01-10 05:35:44] 2026-01-10 04:32:10,181 | INFO     | will attempt to kill all subprocesses of pid=543210
[2026-01-10 05:35:44] 2026-01-10 04:32:11,097 | INFO     | process IDs to be killed: [543210] (in reverse order)
[2026-01-10 05:35:44] 2026-01-10 04:32:11,357 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:35:44] 2026-01-10 04:32:11,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:35:44] 2026-01-10 04:32:11,391 | INFO     | did not find any defunct processes belonging to 543210
[2026-01-10 05:35:44] 2026-01-10 04:32:11,423 | INFO     | did not find any defunct processes belonging to 543210
[2026-01-10 05:35:44] 2026-01-10 04:32:11,424 | INFO     | ready for new job
[2026-01-10 05:35:44] 2026-01-10 04:32:11,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:35:44] 2026-01-10 04:32:11,426 | INFO     | ***************************************
[2026-01-10 05:35:44] 2026-01-10 04:32:11,426 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:35:44] 2026-01-10 04:32:11,426 | INFO     | ***************************************
[2026-01-10 05:35:44] 2026-01-10 04:32:11,426 | INFO     | 
[2026-01-10 05:35:44] 2026-01-10 04:32:11,434 | INFO     | architecture information:
[2026-01-10 05:35:44] 2026-01-10 04:32:11,435 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:35:44] 2026-01-10 04:32:11,458 | INFO     | cat /etc/os-release:
[2026-01-10 05:35:44] NAME="CentOS Linux"
[2026-01-10 05:35:44] VERSION="7 (Core)"
[2026-01-10 05:35:44] ID="centos"
[2026-01-10 05:35:44] ID_LIKE="rhel fedora"
[2026-01-10 05:35:44] VERSION_ID="7"
[2026-01-10 05:35:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:35:44] ANSI_COLOR="0;31"
[2026-01-10 05:35:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:35:44] HOME_URL="https://www.centos.org/"
[2026-01-10 05:35:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:35:44] 
[2026-01-10 05:35:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:35:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:35:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:35:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:35:44] 
[2026-01-10 05:35:44] 2026-01-10 04:32:11,459 | INFO     | ***************************************
[2026-01-10 05:35:44] 2026-01-10 04:32:11,962 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-10 05:35:44] 2026-01-10 04:32:11,985 | INFO     | sufficient remaining disk space (3284430487552 B)
[2026-01-10 05:35:44] 2026-01-10 04:32:11,985 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:35:44] 2026-01-10 04:32:11,985 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:35:44] 2026-01-10 04:32:11,985 | INFO     | update_server=False
[2026-01-10 05:35:44] 2026-01-10 04:32:11,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:35:44] 2026-01-10 04:32:12,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:35:44] 2026-01-10 04:32:12,661 | INFO     | aborting loop
[2026-01-10 05:35:44] 2026-01-10 04:32:12,787 | INFO     | all data control threads have been joined
[2026-01-10 05:35:44] 2026-01-10 04:32:12,801 | INFO     | all job control threads have been joined
[2026-01-10 05:35:44] 2026-01-10 04:32:12,990 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:12,991 | INFO     | all payload control threads have been joined
[2026-01-10 05:35:44] 2026-01-10 04:32:13,159 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:35:44] 2026-01-10 04:32:13,317 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,449 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,655 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,666 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,691 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,792 | INFO     | [data] control thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,806 | INFO     | [job] control thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:13,996 | INFO     | [payload] control thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:14,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:35:44] 2026-01-10 04:32:14,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:35:44] 2026-01-10 04:32:14,225 | INFO     | [job] validate thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:14,238 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:14,367 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:15,146 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:15,164 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:18,188 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:22,565 | INFO     | job.realtimelogging is not enabled
[2026-01-10 05:35:44] 2026-01-10 04:32:23,569 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:35:44] 2026-01-10 04:32:42,377 | INFO     | PID=535699 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 05:35:44] 2026-01-10 04:32:42,377 | INFO     | .. there are 4 such processes running
[2026-01-10 05:35:44] 2026-01-10 04:32:42,377 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:35:44] 2026-01-10 04:32:42,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:35:44] 2026-01-10 04:32:42,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:35:44] 2026-01-10 04:32:45,937 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:35:44] 2026-01-10 04:32:47,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23396342683456)>', '<ExcThread(monitor, started 23396104505088)>']
[2026-01-10 05:35:44] 2026-01-10 04:32:47,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:35:44] 2026-01-10 04:32:47,402 | INFO     | [monitor] control thread has ended
[2026-01-10 05:35:44] 2026-01-10 04:32:52,141 | INFO     | all workflow threads have been joined
[2026-01-10 05:35:44] 2026-01-10 04:32:52,141 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:35:44] 2026-01-10 04:32:52,141 | INFO     | traces error code: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:52,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:35:44] 2026-01-10 04:32:52,288 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:35:44] 2026-01-10 04:32:52,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:35:44] 2026-01-10 04:32:52,295 [wrapper] pilotpid: 535699
[2026-01-10 05:35:44] 2026-01-10 04:32:52,299 [wrapper] Pilot exit status: 0
[2026-01-10 05:35:44] 2026-01-10 04:32:52,313 [wrapper] pandaids: 6962920237
[2026-01-10 05:35:44] 2026-01-10 04:32:52,498 [wrapper] cleanup supervisor_pilot  956860 535700
[2026-01-10 05:35:44] 2026-01-10 04:32:52,502 [wrapper] Test setup, not cleaning
[2026-01-10 05:35:44] 2026-01-10 04:32:52,506 [wrapper] apfmon messages muted
[2026-01-10 05:35:44] 2026-01-10 04:32:52,510 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:35:44] 2026-01-10 04:32:52,514 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:35:44]  *** Error codes and diagnostics ***
[2026-01-10 05:35:44]     "exeErrorCode": 0,
[2026-01-10 05:35:44]     "exeErrorDiag": "",
[2026-01-10 05:35:44]     "pilotErrorCode": 0,
[2026-01-10 05:35:44]     "pilotErrorDiag": "",
[2026-01-10 05:35:44]  *** Listing of results directory ***
[2026-01-10 05:35:44] total 441108
[2026-01-10 05:35:44] -rwx------ 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc       100 Jan 10 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:35:44] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 01:37 run_atlas
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc       105 Jan 10 01:37 job.xml
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc 222270817 Jan 10 01:37 EVNT.47898824._000829.pool.root.1
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc      6691 Jan 10 01:37 init_data.xml
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:37 start_atlas.sh
[2026-01-10 05:35:44] drwxrwx--x 2 boinc boinc      4096 Jan 10 01:37 shared
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc    592393 Jan 10 01:37 input.tar.gz
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc         0 Jan 10 01:37 boinc_lockfile
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc      2519 Jan 10 01:37 pandaJob.out
[2026-01-10 05:35:44] -rw------- 1 boinc boinc    989374 Jan 10 01:37 agis_schedconf.cvmfs.json
[2026-01-10 05:35:44] drwx------ 5 boinc boinc      4096 Jan 10 01:37 pilot3
[2026-01-10 05:35:44] -rw------- 1 boinc boinc 220850279 Jan 10 05:31 HITS.47898826._021842.pool.root.1
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc       528 Jan 10 05:31 boinc_task_state.xml
[2026-01-10 05:35:44] -rw------- 1 boinc boinc      1033 Jan 10 05:31 memory_monitor_summary.json
[2026-01-10 05:35:44] -rw------- 1 boinc boinc   1516240 Jan 10 05:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:35:44] -rw------- 1 boinc boinc    407698 Jan 10 05:31 log.47898826._021842.job.log.tgz.1
[2026-01-10 05:35:44] -rw------- 1 boinc boinc        95 Jan 10 05:31 pilot_heartbeat.json
[2026-01-10 05:35:44] -rw------- 1 boinc boinc      7800 Jan 10 05:32 heartbeat.json
[2026-01-10 05:35:44] -rw------- 1 boinc boinc      4906 Jan 10 05:32 pilotlog.txt
[2026-01-10 05:35:44] -rw------- 1 boinc boinc   1921363 Jan 10 05:32 log.47898826._021842.job.log.1
[2026-01-10 05:35:44] -rw------- 1 boinc boinc       357 Jan 10 05:32 output.list
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc       620 Jan 10 05:32 runtime_log
[2026-01-10 05:35:44] -rw------- 1 boinc boinc   2344960 Jan 10 05:32 result.tar.gz
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc      9223 Jan 10 05:32 runtime_log.err
[2026-01-10 05:35:44] -rw------- 1 boinc boinc       667 Jan 10 05:32 63jLDmkE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVxjKDmO4NyBo.diag
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc        26 Jan 10 05:35 wrapper_checkpoint.txt
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc      8192 Jan 10 05:35 boinc_mmap_file
[2026-01-10 05:35:44] -rw-r--r-- 1 boinc boinc     20910 Jan 10 05:35 stderr.txt
[2026-01-10 05:35:44] HITS file was successfully produced:
[2026-01-10 05:35:44] -rw------- 1 boinc boinc 220850279 Jan 10 05:31 shared/HITS.pool.root.1
[2026-01-10 05:35:44]  *** Contents of shared directory: ***
[2026-01-10 05:35:44] total 435636
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc 222270817 Jan 10 01:37 ATLAS.root_0
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc     15847 Jan 10 01:37 start_atlas.sh
[2026-01-10 05:35:44] -rw-r--r-- 2 boinc boinc    592393 Jan 10 01:37 input.tar.gz
[2026-01-10 05:35:44] -rw------- 1 boinc boinc 220850279 Jan 10 05:31 HITS.pool.root.1
[2026-01-10 05:35:44] -rw------- 1 boinc boinc   2344960 Jan 10 05:32 result.tar.gz
05:35:45 (531663): run_atlas exited; CPU time 54631.197650
05:35:45 (531663): called boinc_finish(0)

</stderr_txt>
]]>

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