Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:26:33 (22909): wrapper (7.7.26015): starting
01:26:33 (22909): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 01:26:33] Arguments: --nthreads 8
[2026-01-09 01:26:33] Threads: 8
[2026-01-09 01:26:33] Checking for CVMFS
[2026-01-09 01:26:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:26:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:26:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:26:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:26:34] 2.11.2.0 25330 34671 124512 154925 3 125 15870046 25165824 758 130560 0 15902587 99.793 10769939 3531 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 01:26:34] CVMFS is ok
[2026-01-09 01:26:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:26:34] Checking for apptainer binary...
[2026-01-09 01:26:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:26:34] Running /usr/bin/apptainer --version
[2026-01-09 01:26:34] apptainer version 1.3.2-1.el7
[2026-01-09 01:26:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:26:36] cg-vwn437.simple-grid.lan
[2026-01-09 01:26:36] apptainer works
[2026-01-09 01:26:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 01:26:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 01:26:36] Starting ATLAS job with PandaID=6963144147
[2026-01-09 01:26:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:28:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:28:33] 2026-01-09 05:27:44,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,670 | INFO     | time since job start (18047s) is within the limit (174528.0s)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,887 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:28:33] 2026-01-09 05:27:44,889 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 06:28:33] 2026-01-09 05:27:44,891 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963144147/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,891 | INFO     | extracted standard info from prmon json
[2026-01-09 06:28:33] 2026-01-09 05:27:44,892 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:28:33] 2026-01-09 05:27:44,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:28:33] 2026-01-09 05:27:44,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:28:33] 2026-01-09 05:27:44,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:28:33] 2026-01-09 05:27:44,898 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:28:33] 2026-01-09 05:27:44,899 | INFO     | sum of square deviations: 7799669962.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,902 | INFO     | sum of deviations: 115215148485.99968
[2026-01-09 06:28:33] 2026-01-09 05:27:44,902 | INFO     | mean x: 1767927519.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,902 | INFO     | mean y: 2453220.505119454
[2026-01-09 06:28:33] 2026-01-09 05:27:44,902 | INFO     | intersect: -26113014819.35526
[2026-01-09 06:28:33] 2026-01-09 05:27:44,903 | INFO     | chi2: 8.161276421537291
[2026-01-09 06:28:33] 2026-01-09 05:27:44,903 | INFO     | sum of square deviations: 7407141672.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,906 | INFO     | sum of deviations: 132656148407.50005
[2026-01-09 06:28:33] 2026-01-09 05:27:44,907 | INFO     | mean x: 1767927366.5
[2026-01-09 06:28:33] 2026-01-09 05:27:44,907 | INFO     | mean y: 2459891.878472222
[2026-01-09 06:28:33] 2026-01-09 05:27:44,907 | INFO     | intersect: -31659744705.968826
[2026-01-09 06:28:33] 2026-01-09 05:27:44,907 | INFO     | chi2: 7.452889675881753
[2026-01-09 06:28:33] 2026-01-09 05:27:44,908 | INFO     | current chi2=7.452889675881753 (change=8.679852379293674 %)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,908 | INFO     | right removable region: 287
[2026-01-09 06:28:33] 2026-01-09 05:27:44,908 | INFO     | sum of square deviations: 7407141672.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,911 | INFO     | sum of deviations: 12445090984.999962
[2026-01-09 06:28:33] 2026-01-09 05:27:44,912 | INFO     | mean x: 1767927671.5
[2026-01-09 06:28:33] 2026-01-09 05:27:44,912 | INFO     | mean y: 2493126.0833333335
[2026-01-09 06:28:33] 2026-01-09 05:27:44,912 | INFO     | intersect: -2967886232.244218
[2026-01-09 06:28:33] 2026-01-09 05:27:44,912 | INFO     | chi2: 3.229562190028972
[2026-01-09 06:28:33] 2026-01-09 05:27:44,912 | INFO     | current chi2=3.229562190028972 (change=60.42822196897678 %)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,913 | INFO     | sum of square deviations: 7028008982.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,916 | INFO     | sum of deviations: -55549494145.00001
[2026-01-09 06:28:33] 2026-01-09 05:27:44,916 | INFO     | mean x: 1767927824.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,916 | INFO     | mean y: 2520410.734982332
[2026-01-09 06:28:33] 2026-01-09 05:27:44,916 | INFO     | intersect: 13976249892.242153
[2026-01-09 06:28:33] 2026-01-09 05:27:44,917 | INFO     | chi2: 1.0650991553419549
[2026-01-09 06:28:33] 2026-01-09 05:27:44,917 | INFO     | current chi2=1.0650991553419549 (change=67.02032372591036 %)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,917 | INFO     | sum of square deviations: 6662039329.5
[2026-01-09 06:28:33] 2026-01-09 05:27:44,920 | INFO     | sum of deviations: -65831645483.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,920 | INFO     | mean x: 1767927976.5
[2026-01-09 06:28:33] 2026-01-09 05:27:44,921 | INFO     | mean y: 2524667.6258992804
[2026-01-09 06:28:33] 2026-01-09 05:27:44,921 | INFO     | intersect: 17472491750.086903
[2026-01-09 06:28:33] 2026-01-09 05:27:44,921 | INFO     | chi2: 0.9730057222922199
[2026-01-09 06:28:33] 2026-01-09 05:27:44,921 | INFO     | current chi2=0.9730057222922199 (change=8.646465691747537 %)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,921 | INFO     | left removable region: 30
[2026-01-09 06:28:33] 2026-01-09 05:27:44,922 | INFO     | sum of square deviations: 5263458688.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,924 | INFO     | sum of deviations: -20638114810.999996
[2026-01-09 06:28:33] 2026-01-09 05:27:44,925 | INFO     | mean x: 1767928251.0
[2026-01-09 06:28:33] 2026-01-09 05:27:44,925 | INFO     | mean y: 2521115.5486381324
[2026-01-09 06:28:33] 2026-01-09 05:27:44,925 | INFO     | intersect: 6934599124.431534
[2026-01-09 06:28:33] 2026-01-09 05:27:44,925 | INFO     | chi2: 0.12590882983988064
[2026-01-09 06:28:33] 2026-01-09 05:27:44,925 | INFO     | current memory leak: -3.92 B/s (using 257 data points, chi2=0.13)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,926 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-09 06:28:33] 2026-01-09 05:27:44,926 | INFO     | ..............................
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . Timing measurements:
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . get job = 0 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . initial setup = 2 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . payload setup = 10 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . stage-in = 0 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . payload execution = 18004 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . stage-out = 1 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | . log creation = 0 s
[2026-01-09 06:28:33] 2026-01-09 05:27:44,927 | INFO     | ..............................
[2026-01-09 06:28:33] 2026-01-09 05:27:45,046 | INFO     | 
[2026-01-09 06:28:33] 2026-01-09 05:27:45,046 | INFO     | job summary report
[2026-01-09 06:28:33] 2026-01-09 05:27:45,046 | INFO     | --------------------------------------------------
[2026-01-09 06:28:33] 2026-01-09 05:27:45,046 | INFO     | PanDA job id: 6963144147
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | task id: 47898826
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | errors: (none)
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | pilot state: finished 
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | transexitcode: 0
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | exeerrorcode: 0
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | exeerrordiag: 
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | exitcode: 0
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | exitmsg: OK
[2026-01-09 06:28:33] 2026-01-09 05:27:45,047 | INFO     | cpuconsumptiontime: 79254 s
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | nevents: 400
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | neventsw: 0
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | pid: 712
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | pgrp: 712
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | corecount: 8
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | event service: False
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | sizes: {0: 2283797, 1: 2283996, 8: 2284258, 12: 2284286, 18018: 2315814, 18019: 2324812, 18021: 2324996, 18029: 2325190}
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | --------------------------------------------------
[2026-01-09 06:28:33] 2026-01-09 05:27:45,048 | INFO     | 
[2026-01-09 06:28:33] 2026-01-09 05:27:45,049 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-09 06:28:33] 2026-01-09 05:27:45,077 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,077 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:28:33] 2026-01-09 05:27:45,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,080 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:28:33] 2026-01-09 05:27:45,080 | INFO     | job 6963144147 has completed (purged errors)
[2026-01-09 06:28:33] 2026-01-09 05:27:45,080 | INFO     | overall cleanup function is called
[2026-01-09 06:28:33] 2026-01-09 05:27:46,088 | INFO     | --- collectZombieJob: --- 10, [712]
[2026-01-09 06:28:33] 2026-01-09 05:27:46,089 | INFO     | zombie collector waiting for pid 712
[2026-01-09 06:28:33] 2026-01-09 05:27:46,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:28:33] 2026-01-09 05:27:46,089 | INFO     | collected zombie processes
[2026-01-09 06:28:33] 2026-01-09 05:27:46,089 | INFO     | will attempt to kill all subprocesses of pid=712
[2026-01-09 06:28:33] 2026-01-09 05:27:46,150 | INFO     | process IDs to be killed: [712] (in reverse order)
[2026-01-09 06:28:33] 2026-01-09 05:27:46,214 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:28:33] 2026-01-09 05:27:46,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:28:33] 2026-01-09 05:27:46,216 | INFO     | did not find any defunct processes belonging to 712
[2026-01-09 06:28:33] 2026-01-09 05:27:46,218 | INFO     | did not find any defunct processes belonging to 712
[2026-01-09 06:28:33] 2026-01-09 05:27:46,218 | INFO     | ready for new job
[2026-01-09 06:28:33] 2026-01-09 05:27:46,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:28:33] 2026-01-09 05:27:46,221 | INFO     | ***************************************
[2026-01-09 06:28:33] 2026-01-09 05:27:46,221 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:28:33] 2026-01-09 05:27:46,221 | INFO     | ***************************************
[2026-01-09 06:28:33] 2026-01-09 05:27:46,221 | INFO     | 
[2026-01-09 06:28:33] 2026-01-09 05:27:46,222 | INFO     | pilot is running in a VM
[2026-01-09 06:28:33] 2026-01-09 05:27:46,222 | INFO     | architecture information:
[2026-01-09 06:28:33] 2026-01-09 05:27:46,223 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:28:33] 2026-01-09 05:27:46,245 | INFO     | cat /etc/os-release:
[2026-01-09 06:28:33] NAME="CentOS Linux"
[2026-01-09 06:28:33] VERSION="7 (Core)"
[2026-01-09 06:28:33] ID="centos"
[2026-01-09 06:28:33] ID_LIKE="rhel fedora"
[2026-01-09 06:28:33] VERSION_ID="7"
[2026-01-09 06:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:28:33] ANSI_COLOR="0;31"
[2026-01-09 06:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:28:33] HOME_URL="https://www.centos.org/"
[2026-01-09 06:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:28:33] 
[2026-01-09 06:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:28:33] 
[2026-01-09 06:28:33] 2026-01-09 05:27:46,245 | INFO     | ***************************************
[2026-01-09 06:28:33] 2026-01-09 05:27:46,748 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-09 06:28:33] 2026-01-09 05:27:46,769 | INFO     | sufficient remaining disk space (497728618496 B)
[2026-01-09 06:28:33] 2026-01-09 05:27:46,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:28:33] 2026-01-09 05:27:46,770 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:28:33] 2026-01-09 05:27:46,770 | INFO     | update_server=False
[2026-01-09 06:28:33] 2026-01-09 05:27:46,770 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:28:33] 2026-01-09 05:27:46,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:28:33] 2026-01-09 05:27:46,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:28:33] 2026-01-09 05:27:47,019 | INFO     | all data control threads have been joined
[2026-01-09 06:28:33] 2026-01-09 05:27:47,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:28:33] 2026-01-09 05:27:47,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:28:33] 2026-01-09 05:27:47,640 | INFO     | aborting loop
[2026-01-09 06:28:33] 2026-01-09 05:27:47,776 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:47,777 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:47,870 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:47,935 | INFO     | all job control threads have been joined
[2026-01-09 06:28:33] 2026-01-09 05:27:48,016 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,025 | INFO     | [data] control thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,264 | INFO     | all payload control threads have been joined
[2026-01-09 06:28:33] 2026-01-09 05:27:48,457 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,646 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,663 | INFO     | [job] validate thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,777 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,840 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,941 | INFO     | [job] control thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,964 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:48,992 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:49,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:49,270 | INFO     | [payload] control thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:27:51,326 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:28:33] 2026-01-09 05:28:17,766 | INFO     | PID=26687 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:28:33] 2026-01-09 05:28:17,767 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:28:33] 2026-01-09 05:28:17,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:28:33] 2026-01-09 05:28:17,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:28:33] 2026-01-09 05:28:27,681 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:28:33] 2026-01-09 05:28:28,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139813680465728)>', '<ExcThread(monitor, started 139812711421696)>']
[2026-01-09 06:28:33] 2026-01-09 05:28:28,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:28:33] 2026-01-09 05:28:28,825 | INFO     | [monitor] control thread has ended
[2026-01-09 06:28:33] 2026-01-09 05:28:33,311 | INFO     | all workflow threads have been joined
[2026-01-09 06:28:33] 2026-01-09 05:28:33,312 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:28:33] 2026-01-09 05:28:33,312 | INFO     | traces error code: 0
[2026-01-09 06:28:33] 2026-01-09 05:28:33,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:28:33] 2026-01-09 05:28:33,453 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:28:33] 2026-01-09 05:28:33,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:28:33] 2026-01-09 05:28:33,461 [wrapper] pilotpid: 26687
[2026-01-09 06:28:33] 2026-01-09 05:28:33,464 [wrapper] Pilot exit status: 0
[2026-01-09 06:28:33] 2026-01-09 05:28:33,484 [wrapper] pandaids: 6963144147
[2026-01-09 06:28:33] 2026-01-09 05:28:33,525 [wrapper] cleanup supervisor_pilot 30412 26688
[2026-01-09 06:28:33] 2026-01-09 05:28:33,531 [wrapper] Test setup, not cleaning
[2026-01-09 06:28:33] 2026-01-09 05:28:33,535 [wrapper] apfmon messages muted
[2026-01-09 06:28:33] 2026-01-09 05:28:33,539 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:28:33] 2026-01-09 05:28:33,542 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:28:33]  *** Error codes and diagnostics ***
[2026-01-09 06:28:33]     "exeErrorCode": 0,
[2026-01-09 06:28:33]     "exeErrorDiag": "",
[2026-01-09 06:28:33]     "pilotErrorCode": 0,
[2026-01-09 06:28:33]     "pilotErrorDiag": "",
[2026-01-09 06:28:33]  *** Listing of results directory ***
[2026-01-09 06:28:33] total 442724
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 13:19 pilot3.tar.gz
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 13:19 queuedata.json
[2026-01-09 06:28:33] -rwx------. 1 boinc boinc     36322 Jan  8 13:19 runpilot2-wrapper.sh
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc       100 Jan  9 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:28:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 01:26 run_atlas
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc       105 Jan  9 01:26 job.xml
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc 225772522 Jan  9 01:26 EVNT.47898824._001008.pool.root.1
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc    592391 Jan  9 01:26 input.tar.gz
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc      6390 Jan  9 01:26 init_data.xml
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:26 start_atlas.sh
[2026-01-09 06:28:33] drwxrwx--x. 2 boinc boinc        68 Jan  9 01:26 shared
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc         0 Jan  9 01:26 boinc_lockfile
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc      2518 Jan  9 01:26 pandaJob.out
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc    989837 Jan  9 01:26 agis_schedconf.cvmfs.json
[2026-01-09 06:28:33] drwx------. 5 boinc boinc      4096 Jan  9 01:26 pilot3
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc 217856740 Jan  9 06:26 HITS.47898826._025358.pool.root.1
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:27 boinc_task_state.xml
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc      1015 Jan  9 06:27 memory_monitor_summary.json
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc   1516240 Jan  9 06:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc    508249 Jan  9 06:27 log.47898826._025358.job.log.tgz.1
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc      7774 Jan  9 06:27 heartbeat.json
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc        95 Jan  9 06:28 pilot_heartbeat.json
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:28 boinc_mmap_file
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:28 wrapper_checkpoint.txt
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc      4809 Jan  9 06:28 pilotlog.txt
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc   2400262 Jan  9 06:28 log.47898826._025358.job.log.1
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc       357 Jan  9 06:28 output.list
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:28 runtime_log
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc   2928640 Jan  9 06:28 result.tar.gz
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:28 runtime_log.err
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc       656 Jan  9 06:28 LvyKDmUA4x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgIfKDmURWBWm.diag
[2026-01-09 06:28:33] -rw-r--r--. 1 boinc boinc     20761 Jan  9 06:28 stderr.txt
[2026-01-09 06:28:33] HITS file was successfully produced:
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc 217856740 Jan  9 06:26 shared/HITS.pool.root.1
[2026-01-09 06:28:33]  *** Contents of shared directory: ***
[2026-01-09 06:28:33] total 436692
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc 225772522 Jan  9 01:26 ATLAS.root_0
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc    592391 Jan  9 01:26 input.tar.gz
[2026-01-09 06:28:33] -rw-r--r--. 2 boinc boinc     15847 Jan  9 01:26 start_atlas.sh
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc 217856740 Jan  9 06:26 HITS.pool.root.1
[2026-01-09 06:28:33] -rw-------. 1 boinc boinc   2928640 Jan  9 06:28 result.tar.gz
06:28:34 (22909): run_atlas exited; CPU time 79432.000076
06:28:34 (22909): called boinc_finish(0)

</stderr_txt>
]]>

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