Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:40 (2414765): wrapper (7.7.26015): starting
08:44:40 (2414765): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 08:44:40] Arguments: --nthreads 12
[2026-01-08 08:44:40] Threads: 12
[2026-01-08 08:44:40] Checking for CVMFS
[2026-01-08 08:44:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:44:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:44:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:44:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:44:41] 2.11.3.0 1262301 55410 213452 154914 0 324 42525346 45568000 16020 130560 0 427503733 99.769 286060964 20210 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 08:44:41] CVMFS is ok
[2026-01-08 08:44:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:44:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:44:41] Further information can be found at the LHC@home message board.
[2026-01-08 08:44:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:44:41] Checking for apptainer binary...
[2026-01-08 08:44:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:44:41] Running /usr/bin/apptainer --version
[2026-01-08 08:44:41] apptainer version 1.4.1-1.el9
[2026-01-08 08:44:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:44:41] wns0169.triumf.lcg
[2026-01-08 08:44:41] apptainer works
[2026-01-08 08:44:41] Set ATHENA_PROC_NUMBER=12
[2026-01-08 08:44:41] Set ATHENA_CORE_NUMBER=12
[2026-01-08 08:44:41] Starting ATLAS job with PandaID=6963144668
[2026-01-08 08:44:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:47:56]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | wrong length of table data, x=[1767890709.0], y=[1215.0] (must be same and length>=4)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | could have reported an average CPU frequency of 3030 MHz (4 samples)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . Timing measurements:
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . get job = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . initial setup = 2 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload setup = 3 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-in = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload execution = 13 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-out = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . log creation = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144668/pilotlog.txt
[2026-01-08 08:47:56] 2026-01-08 16:47:23,009 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 08:47:56] - Log from pilotlog.txt -
[2026-01-08 08:47:56] 2026-01-08 16:47:22,911 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:47:56] 2026-01-08 16:47:22,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | found no stored workdir sizes
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | wrong length of table data, x=[1767890709.0], y=[1215.0] (must be same and length>=4)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | could have reported an average CPU frequency of 3030 MHz (4 samples)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . Timing measurements:
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . get job = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . initial setup = 2 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload setup = 3 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-in = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload execution = 13 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-out = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . log creation = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144668/pilotlog.txt
[2026-01-08 08:47:56] 2026-01-08 16:47:23,009 | WARNING  | 
[2026-01-08 08:47:56] [begin log extracts]
[2026-01-08 08:47:56] - Log from pilotlog.txt -
[2026-01-08 08:47:56] 2026-01-08 16:47:22,911 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:47:56] 2026-01-08 16:47:22,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | found no stored workdir sizes
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | WARNING  | wrong length of table data, x=[1767890709.0], y=[1215.0] (must be same and length>=4)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,912 | INFO     | could have reported an average CPU frequency of 3030 MHz (4 samples)
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . Timing measurements:
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . get job = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . initial setup = 2 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload setup = 3 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-in = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . payload execution = 13 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . stage-out = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | . log creation = 0 s
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | ..............................
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:47:56] 2026-01-08 16:47:22,913 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963144668/pilotlog.txt
[2026-01-08 08:47:56] [end log extracts]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,009 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 08:47:56] 2026-01-08 16:47:23,010 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | 
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | job summary report
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | --------------------------------------------------
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | PanDA job id: 6963144668
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | task id: 47898826
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 08:45:14,383 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | pilot state: failed 
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | transexitcode: 65
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | exeerrorcode: 65
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | exitcode: 65
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | cpuconsumptiontime: 13 s
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | nevents: 0
[2026-01-08 08:47:56] 2026-01-08 16:47:23,409 | INFO     | neventsw: 0
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | pid: 2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | pgrp: 2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | corecount: 12
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | event service: False
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | sizes: {0: 2283792, 1: 2283991, 3: 2284253, 11: 2284281, 19: 2307428, 20: 2311852, 141: 2311990}
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | --------------------------------------------------
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | 
[2026-01-08 08:47:56] 2026-01-08 16:47:23,410 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:47:56] 2026-01-08 16:47:23,448 | INFO     | job 6963144668 has completed (purged errors)
[2026-01-08 08:47:56] 2026-01-08 16:47:23,449 | INFO     | overall cleanup function is called
[2026-01-08 08:47:56] 2026-01-08 16:47:23,816 | INFO     | PID=2418415 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 08:47:56] 2026-01-08 16:47:23,816 | INFO     | .. there are 33 such processes running
[2026-01-08 08:47:56] 2026-01-08 16:47:24,454 | INFO     | --- collectZombieJob: --- 10, [2424995]
[2026-01-08 08:47:56] 2026-01-08 16:47:24,454 | INFO     | zombie collector waiting for pid 2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:24,454 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:47:56] 2026-01-08 16:47:24,455 | INFO     | collected zombie processes
[2026-01-08 08:47:56] 2026-01-08 16:47:24,455 | INFO     | will attempt to kill all subprocesses of pid=2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:24,644 | INFO     | process IDs to be killed: [2424995] (in reverse order)
[2026-01-08 08:47:56] 2026-01-08 16:47:24,841 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:47:56] 2026-01-08 16:47:24,841 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:47:56] 2026-01-08 16:47:24,848 | INFO     | did not find any defunct processes belonging to 2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:24,854 | INFO     | did not find any defunct processes belonging to 2424995
[2026-01-08 08:47:56] 2026-01-08 16:47:24,854 | INFO     | ready for new job
[2026-01-08 08:47:56] 2026-01-08 16:47:24,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:47:56] 2026-01-08 16:47:24,855 | INFO     | ***************************************
[2026-01-08 08:47:56] 2026-01-08 16:47:24,855 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:47:56] 2026-01-08 16:47:24,855 | INFO     | ***************************************
[2026-01-08 08:47:56] 2026-01-08 16:47:24,855 | INFO     | 
[2026-01-08 08:47:56] 2026-01-08 16:47:24,857 | INFO     | architecture information:
[2026-01-08 08:47:56] 2026-01-08 16:47:24,857 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:47:56] 2026-01-08 16:47:24,866 | INFO     | cat /etc/os-release:
[2026-01-08 08:47:56] NAME="CentOS Linux"
[2026-01-08 08:47:56] VERSION="7 (Core)"
[2026-01-08 08:47:56] ID="centos"
[2026-01-08 08:47:56] ID_LIKE="rhel fedora"
[2026-01-08 08:47:56] VERSION_ID="7"
[2026-01-08 08:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:47:56] ANSI_COLOR="0;31"
[2026-01-08 08:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:47:56] HOME_URL="https://www.centos.org/"
[2026-01-08 08:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:47:56] 
[2026-01-08 08:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:47:56] 
[2026-01-08 08:47:56] 2026-01-08 16:47:24,867 | INFO     | ***************************************
[2026-01-08 08:47:56] 2026-01-08 16:47:25,370 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 08:47:56] 2026-01-08 16:47:25,382 | INFO     | sufficient remaining disk space (2515807502336 B)
[2026-01-08 08:47:56] 2026-01-08 16:47:25,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:47:56] 2026-01-08 16:47:25,383 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:47:56] 2026-01-08 16:47:25,383 | INFO     | update_server=False
[2026-01-08 08:47:56] 2026-01-08 16:47:25,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:47:56] 2026-01-08 16:47:25,426 | INFO     | all job control threads have been joined
[2026-01-08 08:47:56] 2026-01-08 16:47:25,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:47:56] 2026-01-08 16:47:25,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:47:56] 2026-01-08 16:47:26,143 | INFO     | all data control threads have been joined
[2026-01-08 08:47:56] 2026-01-08 16:47:26,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:47:56] 2026-01-08 16:47:26,173 | INFO     | aborting loop
[2026-01-08 08:47:56] 2026-01-08 16:47:26,388 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:26,432 | INFO     | [job] control thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:26,438 | INFO     | all payload control threads have been joined
[2026-01-08 08:47:56] 2026-01-08 16:47:26,725 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,150 | INFO     | [data] control thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,155 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,179 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,353 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,442 | INFO     | [payload] control thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,491 | INFO     | [job] validate thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,579 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,583 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,718 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:27,764 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:28,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:47:56] 2026-01-08 16:47:29,106 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:29,587 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:47:56] 2026-01-08 16:47:48,280 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:47:56] 2026-01-08 16:47:49,702 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788799981376)>', '<ExcThread(monitor, started 139788267009792)>']
[2026-01-08 08:47:56] 2026-01-08 16:47:54,730 | INFO     | all workflow threads have been joined
[2026-01-08 08:47:56] 2026-01-08 16:47:54,730 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:47:56] 2026-01-08 16:47:54,730 | INFO     | traces error code: 0
[2026-01-08 08:47:56] 2026-01-08 16:47:54,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:47:56] 2026-01-08 16:47:56,075 | INFO     | PID=2418415 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 08:47:56] 2026-01-08 16:47:56,075 | INFO     | .. there are 33 such processes running
[2026-01-08 08:47:56] 2026-01-08 16:47:56,076 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:47:56] 2026-01-08 16:47:56,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:47:56] 2026-01-08 16:47:56,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:47:56] 2026-01-08 16:47:56,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:47:56] 2026-01-08 16:47:56,076 | INFO     | [monitor] control thread has ended
[2026-01-08 08:47:56] 2026-01-08 16:47:56,223 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:47:56] 2026-01-08 16:47:56,224 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:47:56] 2026-01-08 16:47:56,225 [wrapper] pilotpid: 2418415
[2026-01-08 08:47:56] 2026-01-08 16:47:56,226 [wrapper] Pilot exit status: 0
[2026-01-08 08:47:56] 2026-01-08 16:47:56,233 [wrapper] pandaids: 6963144668
[2026-01-08 08:47:56] 2026-01-08 16:47:56,267 [wrapper] cleanup supervisor_pilot 2418421 2418416
[2026-01-08 08:47:56] 2026-01-08 16:47:56,268 [wrapper] Test setup, not cleaning
[2026-01-08 08:47:56] 2026-01-08 16:47:56,269 [wrapper] apfmon messages muted
[2026-01-08 08:47:56] 2026-01-08 16:47:56,270 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:47:56] 2026-01-08 16:47:56,272 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:47:56]  *** Error codes and diagnostics ***
[2026-01-08 08:47:56]     "exeErrorCode": 65,
[2026-01-08 08:47:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 08:47:56]     "pilotErrorCode": 1305,
[2026-01-08 08:47:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 08:47:56]  *** Listing of results directory ***
[2026-01-08 08:47:56] total 224892
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc    579449 Jan  8 04:19 pilot3.tar.gz
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc      5112 Jan  8 04:19 queuedata.json
[2026-01-08 08:47:56] -rwx------. 1 boinc boinc     36322 Jan  8 04:19 runpilot2-wrapper.sh
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc       100 Jan  8 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:47:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 08:44 run_atlas
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc       105 Jan  8 08:44 job.xml
[2026-01-08 08:47:56] drwxrwx--x. 2 boinc boinc      4096 Jan  8 08:44 shared
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc    592397 Jan  8 08:44 input.tar.gz
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc      6628 Jan  8 08:44 init_data.xml
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc 226173358 Jan  8 08:44 EVNT.47898824._001034.pool.root.1
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:44 start_atlas.sh
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc         0 Jan  8 08:44 boinc_lockfile
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc      2517 Jan  8 08:44 pandaJob.out
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc    989837 Jan  8 08:44 agis_schedconf.cvmfs.json
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc   1516240 Jan  8 08:44 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:47:56] drwx------. 5 boinc boinc      4096 Jan  8 08:44 pilot3
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc       964 Jan  8 08:45 memory_monitor_summary.json
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc     20690 Jan  8 08:45 log.47898826._025795.job.log.tgz.1
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc      8397 Jan  8 08:47 heartbeat.json
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc        22 Jan  8 08:47 wrapper_checkpoint.txt
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc       523 Jan  8 08:47 boinc_task_state.xml
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc      8192 Jan  8 08:47 boinc_mmap_file
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc        95 Jan  8 08:47 pilot_heartbeat.json
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc       823 Jan  8 08:47 pilotlog.txt
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc     81856 Jan  8 08:47 log.47898826._025795.job.log.1
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc       188 Jan  8 08:47 output.list
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc       620 Jan  8 08:47 runtime_log
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc    122880 Jan  8 08:47 result.tar.gz
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc       645 Jan  8 08:47 t5UMDmUA4x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIXkKDmFKalGo.diag
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc      8636 Jan  8 08:47 runtime_log.err
[2026-01-08 08:47:56] -rw-r--r--. 1 boinc boinc     21767 Jan  8 08:47 stderr.txt
[2026-01-08 08:47:56] No HITS result produced
[2026-01-08 08:47:56]  *** Contents of shared directory: ***
[2026-01-08 08:47:56] total 221596
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc    592397 Jan  8 08:44 input.tar.gz
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc 226173358 Jan  8 08:44 ATLAS.root_0
[2026-01-08 08:47:56] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:44 start_atlas.sh
[2026-01-08 08:47:56] -rw-------. 1 boinc boinc    122880 Jan  8 08:47 result.tar.gz
08:47:57 (2414765): run_atlas exited; CPU time 17.045024
08:47:57 (2414765): called boinc_finish(0)

</stderr_txt>
]]>

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