Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:52 (1595062): wrapper (7.7.26015): starting
12:17:52 (1595062): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 12:17:52] Arguments: --nthreads 4
[2026-01-10 12:17:52] Threads: 4
[2026-01-10 12:17:52] Checking for CVMFS
[2026-01-10 12:17:52] No cvmfs_config command found, will try listing directly
[2026-01-10 12:17:52] CVMFS is ok
[2026-01-10 12:17:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 12:17:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 12:17:52] Further information can be found at the LHC@home message board.
[2026-01-10 12:17:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:17:52] Checking for apptainer binary...
[2026-01-10 12:17:52] which: no apptainer in ((null))
[2026-01-10 12:17:52] apptainer is not installed, using version from CVMFS
[2026-01-10 12:17:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:17:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-10 12:17:53] apptainer works
[2026-01-10 12:17:53] Set ATHENA_PROC_NUMBER=4
[2026-01-10 12:17:53] Set ATHENA_CORE_NUMBER=4
[2026-01-10 12:17:53] Starting ATLAS job with PandaID=6962919556
[2026-01-10 12:17:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:07:37]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:07:37] 2026-01-10 15:06:25,880 | INFO     | monitor loop #931: job 0:6962919556 is in state 'finished'
[2026-01-10 16:07:37] 2026-01-10 15:06:25,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:07:37] 2026-01-10 15:06:26,762 | INFO     | time since job start (13697s) is within the limit (174528.0s)
[2026-01-10 16:07:37] 2026-01-10 15:06:28,383 | INFO     | monitor loop #932: job 0:6962919556 is in state 'finished'
[2026-01-10 16:07:37] 2026-01-10 15:06:28,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:07:37] 2026-01-10 15:06:28,767 | INFO     | time since job start (13699s) is within the limit (174528.0s)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,773 | INFO     | time since job start (13701s) is within the limit (174528.0s)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,831 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 16:07:37] 2026-01-10 15:06:30,852 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2706.428757812501
[2026-01-10 16:07:37] 2026-01-10 15:06:30,876 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6962919556/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,877 | INFO     | extracted standard info from prmon json
[2026-01-10 16:07:37] 2026-01-10 15:06:30,877 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:07:37] 2026-01-10 15:06:30,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:07:37] 2026-01-10 15:06:30,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:07:37] 2026-01-10 15:06:30,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:07:37] 2026-01-10 15:06:30,882 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:07:37] 2026-01-10 15:06:30,882 | INFO     | sum of square deviations: 3485088600.0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,884 | INFO     | sum of deviations: -49550874375.999985
[2026-01-10 16:07:37] 2026-01-10 15:06:30,884 | INFO     | mean x: 1768050725.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,884 | INFO     | mean y: 2382640.3303571427
[2026-01-10 16:07:37] 2026-01-10 15:06:30,884 | INFO     | intersect: 25140469341.955715
[2026-01-10 16:07:37] 2026-01-10 15:06:30,885 | INFO     | chi2: 1.592008895950978
[2026-01-10 16:07:37] 2026-01-10 15:06:30,885 | INFO     | sum of square deviations: 3256879670.0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | sum of deviations: -48059609510.999985
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | mean x: 1768050573.0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | mean y: 2383637.0410958906
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | intersect: 26092331299.762012
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | chi2: 1.5867846325199173
[2026-01-10 16:07:37] 2026-01-10 15:06:30,887 | INFO     | current chi2=1.5867846325199173 (change=0.32815541699218664 %)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,888 | INFO     | right removable region: 218
[2026-01-10 16:07:37] 2026-01-10 15:06:30,888 | INFO     | sum of square deviations: 3256879670.0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,889 | INFO     | sum of deviations: -71364090807.99997
[2026-01-10 16:07:37] 2026-01-10 15:06:30,890 | INFO     | mean x: 1768050878.0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,890 | INFO     | mean y: 2396970.073059361
[2026-01-10 16:07:37] 2026-01-10 15:06:30,890 | INFO     | intersect: 38743571405.52774
[2026-01-10 16:07:37] 2026-01-10 15:06:30,890 | INFO     | chi2: 0.3737007915855304
[2026-01-10 16:07:37] 2026-01-10 15:06:30,890 | INFO     | current chi2=0.3737007915855304 (change=76.52646335482302 %)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,891 | INFO     | sum of square deviations: 3038856977.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,892 | INFO     | sum of deviations: -62274754423.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,892 | INFO     | mean x: 1768051030.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,892 | INFO     | mean y: 2390597.35046729
[2026-01-10 16:07:37] 2026-01-10 15:06:30,892 | INFO     | intersect: 36234745245.11164
[2026-01-10 16:07:37] 2026-01-10 15:06:30,893 | INFO     | chi2: 0.3572960927215129
[2026-01-10 16:07:37] 2026-01-10 15:06:30,893 | INFO     | current chi2=0.3572960927215129 (change=4.389795053528233 %)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,893 | INFO     | left removable region: 20
[2026-01-10 16:07:37] 2026-01-10 15:06:30,893 | INFO     | sum of square deviations: 2406926989.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,895 | INFO     | sum of deviations: -38905818482.99996
[2026-01-10 16:07:37] 2026-01-10 15:06:30,895 | INFO     | mean x: 1768051152.5
[2026-01-10 16:07:37] 2026-01-10 15:06:30,895 | INFO     | mean y: 2375078.1515151514
[2026-01-10 16:07:37] 2026-01-10 15:06:30,895 | INFO     | intersect: 28581338008.02143
[2026-01-10 16:07:37] 2026-01-10 15:06:30,895 | INFO     | chi2: 0.2702491475335643
[2026-01-10 16:07:37] 2026-01-10 15:06:30,896 | INFO     | current memory leak: -16.16 B/s (using 198 data points, chi2=0.27)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,896 | INFO     | monitor loop #933: job 0:6962919556 is in state 'finished'
[2026-01-10 16:07:37] 2026-01-10 15:06:30,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | could have reported an average CPU frequency of 2695 MHz (11 samples)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | ..............................
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | . Timing measurements:
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | . get job = 0 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | . initial setup = 1 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | . payload setup = 9 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,897 | INFO     | . stage-in = 0 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,898 | INFO     | . payload execution = 13660 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,898 | INFO     | . stage-out = 0 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,898 | INFO     | . log creation = 0 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,898 | INFO     | ..............................
[2026-01-10 16:07:37] 2026-01-10 15:06:30,996 | INFO     | 
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | job summary report
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | --------------------------------------------------
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | PanDA job id: 6962919556
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | task id: 47898826
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | errors: (none)
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | pilot state: finished 
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | transexitcode: 0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | exeerrorcode: 0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,997 | INFO     | exeerrordiag: 
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | exitcode: 0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | exitmsg: OK
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | cpuconsumptiontime: 52579 s
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | nevents: 400
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | neventsw: 0
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | pid: 1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | pgrp: 1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | corecount: 4
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | event service: False
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | sizes: {0: 2283981, 7: 2284243, 11: 2284271, 13673: 2315269, 13675: 2324347, 13683: 2324485}
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | --------------------------------------------------
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | 
[2026-01-10 16:07:37] 2026-01-10 15:06:30,998 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-01-10 16:07:37] 2026-01-10 15:06:31,028 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,030 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:07:37] 2026-01-10 15:06:31,031 | INFO     | job 6962919556 has completed (purged errors)
[2026-01-10 16:07:37] 2026-01-10 15:06:31,031 | INFO     | overall cleanup function is called
[2026-01-10 16:07:37] 2026-01-10 15:06:32,039 | INFO     | --- collectZombieJob: --- 10, [1607251]
[2026-01-10 16:07:37] 2026-01-10 15:06:32,039 | INFO     | zombie collector waiting for pid 1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:32,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:07:37] 2026-01-10 15:06:32,040 | INFO     | collected zombie processes
[2026-01-10 16:07:37] 2026-01-10 15:06:32,040 | INFO     | will attempt to kill all subprocesses of pid=1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:32,788 | INFO     | process IDs to be killed: [1607251] (in reverse order)
[2026-01-10 16:07:37] 2026-01-10 15:06:33,045 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:07:37] 2026-01-10 15:06:33,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:07:37] 2026-01-10 15:06:33,079 | INFO     | did not find any defunct processes belonging to 1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:33,112 | INFO     | did not find any defunct processes belonging to 1607251
[2026-01-10 16:07:37] 2026-01-10 15:06:33,112 | INFO     | ready for new job
[2026-01-10 16:07:37] 2026-01-10 15:06:33,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:07:37] 2026-01-10 15:06:33,115 | INFO     | ***************************************
[2026-01-10 16:07:37] 2026-01-10 15:06:33,115 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:07:37] 2026-01-10 15:06:33,115 | INFO     | ***************************************
[2026-01-10 16:07:37] 2026-01-10 15:06:33,115 | INFO     | 
[2026-01-10 16:07:37] 2026-01-10 15:06:33,124 | INFO     | architecture information:
[2026-01-10 16:07:37] 2026-01-10 15:06:33,124 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:07:37] 2026-01-10 15:06:33,145 | INFO     | cat /etc/os-release:
[2026-01-10 16:07:37] NAME="CentOS Linux"
[2026-01-10 16:07:37] VERSION="7 (Core)"
[2026-01-10 16:07:37] ID="centos"
[2026-01-10 16:07:37] ID_LIKE="rhel fedora"
[2026-01-10 16:07:37] VERSION_ID="7"
[2026-01-10 16:07:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:07:37] ANSI_COLOR="0;31"
[2026-01-10 16:07:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:07:37] HOME_URL="https://www.centos.org/"
[2026-01-10 16:07:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:07:37] 
[2026-01-10 16:07:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:07:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:07:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:07:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:07:37] 
[2026-01-10 16:07:37] 2026-01-10 15:06:33,145 | INFO     | ***************************************
[2026-01-10 16:07:37] 2026-01-10 15:06:33,648 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-01-10 16:07:37] 2026-01-10 15:06:33,671 | INFO     | sufficient remaining disk space (3306201022464 B)
[2026-01-10 16:07:37] 2026-01-10 15:06:33,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:07:37] 2026-01-10 15:06:33,671 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:07:37] 2026-01-10 15:06:33,671 | INFO     | update_server=False
[2026-01-10 16:07:37] 2026-01-10 15:06:33,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:07:37] 2026-01-10 15:06:33,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:07:37] 2026-01-10 15:06:33,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:07:37] 2026-01-10 15:06:33,924 | INFO     | all data control threads have been joined
[2026-01-10 16:07:37] 2026-01-10 15:06:34,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:07:37] 2026-01-10 15:06:34,405 | INFO     | aborting loop
[2026-01-10 16:07:37] 2026-01-10 15:06:34,493 | INFO     | all job control threads have been joined
[2026-01-10 16:07:37] 2026-01-10 15:06:34,677 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,766 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,787 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,825 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,860 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,871 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:34,916 | INFO     | all payload control threads have been joined
[2026-01-10 16:07:37] 2026-01-10 15:06:34,929 | INFO     | [data] control thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,370 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,406 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,498 | INFO     | [job] control thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,677 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,715 | INFO     | [job] validate thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,805 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:35,921 | INFO     | [payload] control thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:36,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:07:37] 2026-01-10 15:06:37,012 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:06:37,715 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:07:37] 2026-01-10 15:07:04,874 | INFO     | PID=1599824 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 16:07:37] 2026-01-10 15:07:04,874 | INFO     | .. there are 6 such processes running
[2026-01-10 16:07:37] 2026-01-10 15:07:04,875 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:07:37] 2026-01-10 15:07:04,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:07:37] 2026-01-10 15:07:04,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:07:37] 2026-01-10 15:07:31,285 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:07:37] 2026-01-10 15:07:32,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22429617166144)>', '<ExcThread(monitor, started 22429382448896)>']
[2026-01-10 16:07:37] 2026-01-10 15:07:33,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:07:37] 2026-01-10 15:07:33,015 | INFO     | [monitor] control thread has ended
[2026-01-10 16:07:37] 2026-01-10 15:07:37,513 | INFO     | all workflow threads have been joined
[2026-01-10 16:07:37] 2026-01-10 15:07:37,513 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:07:37] 2026-01-10 15:07:37,513 | INFO     | traces error code: 0
[2026-01-10 16:07:37] 2026-01-10 15:07:37,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:07:37] 2026-01-10 15:07:37,652 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:07:37] 2026-01-10 15:07:37,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:07:37] 2026-01-10 15:07:37,659 [wrapper] pilotpid: 1599824
[2026-01-10 16:07:37] 2026-01-10 15:07:37,663 [wrapper] Pilot exit status: 0
[2026-01-10 16:07:37] 2026-01-10 15:07:37,677 [wrapper] pandaids: 6962919556
[2026-01-10 16:07:37] 2026-01-10 15:07:37,839 [wrapper] cleanup supervisor_pilot 2021151 1599825
[2026-01-10 16:07:37] 2026-01-10 15:07:37,843 [wrapper] Test setup, not cleaning
[2026-01-10 16:07:37] 2026-01-10 15:07:37,846 [wrapper] apfmon messages muted
[2026-01-10 16:07:37] 2026-01-10 15:07:37,849 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:07:37] 2026-01-10 15:07:37,852 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:07:37]  *** Error codes and diagnostics ***
[2026-01-10 16:07:37]     "exeErrorCode": 0,
[2026-01-10 16:07:37]     "exeErrorDiag": "",
[2026-01-10 16:07:37]     "pilotErrorCode": 0,
[2026-01-10 16:07:37]     "pilotErrorDiag": "",
[2026-01-10 16:07:37]  *** Listing of results directory ***
[2026-01-10 16:07:37] total 437112
[2026-01-10 16:07:37] -rwx------ 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc       100 Jan 10 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:07:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 11:46 run_atlas
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc       105 Jan 10 11:46 job.xml
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc      6692 Jan 10 12:17 init_data.xml
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc 222291242 Jan 10 12:17 EVNT.47898824._000336.pool.root.1
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:17 start_atlas.sh
[2026-01-10 16:07:37] drwxrwx--x 2 boinc boinc      4096 Jan 10 12:17 shared
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc    592397 Jan 10 12:17 input.tar.gz
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc         0 Jan 10 12:17 boinc_lockfile
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc      2519 Jan 10 12:17 pandaJob.out
[2026-01-10 16:07:37] -rw------- 1 boinc boinc    989564 Jan 10 12:18 agis_schedconf.cvmfs.json
[2026-01-10 16:07:37] drwx------ 5 boinc boinc      4096 Jan 10 12:18 pilot3
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc       529 Jan 10 16:05 boinc_task_state.xml
[2026-01-10 16:07:37] -rw------- 1 boinc boinc 216785492 Jan 10 16:05 HITS.47898826._021346.pool.root.1
[2026-01-10 16:07:37] -rw------- 1 boinc boinc      1035 Jan 10 16:06 memory_monitor_summary.json
[2026-01-10 16:07:37] -rw------- 1 boinc boinc   1516240 Jan 10 16:06 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:07:37] -rw------- 1 boinc boinc    409063 Jan 10 16:06 log.47898826._021346.job.log.tgz.1
[2026-01-10 16:07:37] -rw------- 1 boinc boinc      7795 Jan 10 16:06 heartbeat.json
[2026-01-10 16:07:37] -rw------- 1 boinc boinc        95 Jan 10 16:07 pilot_heartbeat.json
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc        27 Jan 10 16:07 wrapper_checkpoint.txt
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc      8192 Jan 10 16:07 boinc_mmap_file
[2026-01-10 16:07:37] -rw------- 1 boinc boinc      4835 Jan 10 16:07 pilotlog.txt
[2026-01-10 16:07:37] -rw------- 1 boinc boinc   1894426 Jan 10 16:07 log.47898826._021346.job.log.1
[2026-01-10 16:07:37] -rw------- 1 boinc boinc       357 Jan 10 16:07 output.list
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc       620 Jan 10 16:07 runtime_log
[2026-01-10 16:07:37] -rw------- 1 boinc boinc   2324480 Jan 10 16:07 result.tar.gz
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc      9223 Jan 10 16:07 runtime_log.err
[2026-01-10 16:07:37] -rw------- 1 boinc boinc       667 Jan 10 16:07 4WhKDmLE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1jeKDmRi5D8m.diag
[2026-01-10 16:07:37] -rw-r--r-- 1 boinc boinc     21113 Jan 10 16:07 stderr.txt
[2026-01-10 16:07:37] HITS file was successfully produced:
[2026-01-10 16:07:37] -rw------- 1 boinc boinc 216785492 Jan 10 16:05 shared/HITS.pool.root.1
[2026-01-10 16:07:37]  *** Contents of shared directory: ***
[2026-01-10 16:07:37] total 431668
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc 222291242 Jan 10 12:17 ATLAS.root_0
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc     15847 Jan 10 12:17 start_atlas.sh
[2026-01-10 16:07:37] -rw-r--r-- 2 boinc boinc    592397 Jan 10 12:17 input.tar.gz
[2026-01-10 16:07:37] -rw------- 1 boinc boinc 216785492 Jan 10 16:05 HITS.pool.root.1
[2026-01-10 16:07:37] -rw------- 1 boinc boinc   2324480 Jan 10 16:07 result.tar.gz
16:07:39 (1595062): run_atlas exited; CPU time 53571.402316
16:07:39 (1595062): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN