Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:25:41 (27720): wrapper (7.7.26015): starting
00:25:41 (27720): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 00:25:41] Arguments: --nthreads 8
[2026-01-09 00:25:41] Threads: 8
[2026-01-09 00:25:41] Checking for CVMFS
[2026-01-09 00:25:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:25:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:25:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:25:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:25:45] 2.11.2.0 9903 25245 102492 154924 1 60 14152757 25165824 96 130560 0 2415216 99.377 3343544 2616 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 00:25:45] CVMFS is ok
[2026-01-09 00:25:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:25:45] Checking for apptainer binary...
[2026-01-09 00:25:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:25:45] Running /usr/bin/apptainer --version
[2026-01-09 00:25:45] apptainer version 1.3.2-1.el7
[2026-01-09 00:25:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:26:00] cg-vwn423.simple-grid.lan
[2026-01-09 00:26:00] apptainer works
[2026-01-09 00:26:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 00:26:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 00:26:01] Starting ATLAS job with PandaID=6962919564
[2026-01-09 00:26:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:02:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:02:26] 2026-01-09 05:01:51,885 | INFO     | time since job start (19866s) is within the limit (174528.0s)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,944 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:02:26] 2026-01-09 05:01:52,945 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 06:02:26] 2026-01-09 05:01:52,947 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962919564/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,948 | INFO     | extracted standard info from prmon json
[2026-01-09 06:02:26] 2026-01-09 05:01:52,948 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:02:26] 2026-01-09 05:01:52,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:02:26] 2026-01-09 05:01:52,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:02:26] 2026-01-09 05:01:52,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:02:26] 2026-01-09 05:01:52,955 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:02:26] 2026-01-09 05:01:52,956 | INFO     | sum of square deviations: 9877610318.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,959 | INFO     | sum of deviations: 154238172307.99997
[2026-01-09 06:02:26] 2026-01-09 05:01:52,959 | INFO     | mean x: 1767925211.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,960 | INFO     | mean y: 2454748.403785489
[2026-01-09 06:02:26] 2026-01-09 05:01:52,960 | INFO     | intersect: -27603569840.860157
[2026-01-09 06:02:26] 2026-01-09 05:01:52,960 | INFO     | chi2: 7.117765002438443
[2026-01-09 06:02:26] 2026-01-09 05:01:52,961 | INFO     | sum of square deviations: 9417545878.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,964 | INFO     | sum of deviations: 151198666321.0001
[2026-01-09 06:02:26] 2026-01-09 05:01:52,964 | INFO     | mean x: 1767925058.5
[2026-01-09 06:02:26] 2026-01-09 05:01:52,965 | INFO     | mean y: 2453740.8012820515
[2026-01-09 06:02:26] 2026-01-09 05:01:52,965 | INFO     | intersect: -28381576925.311504
[2026-01-09 06:02:26] 2026-01-09 05:01:52,965 | INFO     | chi2: 7.125874326793045
[2026-01-09 06:02:26] 2026-01-09 05:01:52,966 | INFO     | current chi2=7.125874326793045 (change=-0.11393076832157077 %)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,966 | INFO     | right removable region: 311
[2026-01-09 06:02:26] 2026-01-09 05:01:52,967 | INFO     | sum of square deviations: 9417545878.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,970 | INFO     | sum of deviations: 43825844914.00001
[2026-01-09 06:02:26] 2026-01-09 05:01:52,970 | INFO     | mean x: 1767925363.5
[2026-01-09 06:02:26] 2026-01-09 05:01:52,970 | INFO     | mean y: 2491324.6474358975
[2026-01-09 06:02:26] 2026-01-09 05:01:52,970 | INFO     | intersect: -8224792492.602484
[2026-01-09 06:02:26] 2026-01-09 05:01:52,971 | INFO     | chi2: 2.277535673481573
[2026-01-09 06:02:26] 2026-01-09 05:01:52,971 | INFO     | current chi2=2.277535673481573 (change=68.00209514220654 %)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,972 | INFO     | sum of square deviations: 8971993338.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,975 | INFO     | sum of deviations: -26016237578.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,975 | INFO     | mean x: 1767925516.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,975 | INFO     | mean y: 2515160.5570032573
[2026-01-09 06:02:26] 2026-01-09 05:01:52,975 | INFO     | intersect: 5128998040.304349
[2026-01-09 06:02:26] 2026-01-09 05:01:52,976 | INFO     | chi2: 0.2420114567081972
[2026-01-09 06:02:26] 2026-01-09 05:01:52,976 | INFO     | current chi2=0.2420114567081972 (change=89.37397734199945 %)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,977 | INFO     | sum of square deviations: 8540720135.5
[2026-01-09 06:02:26] 2026-01-09 05:01:52,980 | INFO     | sum of deviations: -35168824191.50001
[2026-01-09 06:02:26] 2026-01-09 05:01:52,980 | INFO     | mean x: 1767925668.5
[2026-01-09 06:02:26] 2026-01-09 05:01:52,980 | INFO     | mean y: 2518380.380794702
[2026-01-09 06:02:26] 2026-01-09 05:01:52,980 | INFO     | intersect: 7282450989.421456
[2026-01-09 06:02:26] 2026-01-09 05:01:52,981 | INFO     | chi2: 0.18821143427306525
[2026-01-09 06:02:26] 2026-01-09 05:01:52,981 | INFO     | current chi2=0.18821143427306525 (change=22.230361804730915 %)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,981 | INFO     | left removable region: 30
[2026-01-09 06:02:26] 2026-01-09 05:01:52,981 | INFO     | sum of square deviations: 6880054580.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,984 | INFO     | sum of deviations: -9654173357.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,984 | INFO     | mean x: 1767925943.0
[2026-01-09 06:02:26] 2026-01-09 05:01:52,984 | INFO     | mean y: 2508277.1637010677
[2026-01-09 06:02:26] 2026-01-09 05:01:52,984 | INFO     | intersect: 2483282715.447256
[2026-01-09 06:02:26] 2026-01-09 05:01:52,985 | INFO     | chi2: 0.1092062358778561
[2026-01-09 06:02:26] 2026-01-09 05:01:52,985 | INFO     | current memory leak: -1.40 B/s (using 281 data points, chi2=0.11)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | ..............................
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . Timing measurements:
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . get job = 0 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . initial setup = 10 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . payload setup = 141 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . stage-in = 0 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,986 | INFO     | . payload execution = 19496 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,987 | INFO     | . stage-out = 1 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,987 | INFO     | . log creation = 0 s
[2026-01-09 06:02:26] 2026-01-09 05:01:52,987 | INFO     | ..............................
[2026-01-09 06:02:26] 2026-01-09 05:01:53,216 | INFO     | 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,216 | INFO     | job summary report
[2026-01-09 06:02:26] 2026-01-09 05:01:53,216 | INFO     | --------------------------------------------------
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | PanDA job id: 6962919564
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | task id: 47898826
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | errors: (none)
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | pilot state: finished 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | transexitcode: 0
[2026-01-09 06:02:26] 2026-01-09 05:01:53,217 | INFO     | exeerrorcode: 0
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | exeerrordiag: 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | exitcode: 0
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | exitmsg: OK
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | cpuconsumptiontime: 77906 s
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | nevents: 400
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | neventsw: 0
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | pid: 5577
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | pgrp: 5577
[2026-01-09 06:02:26] 2026-01-09 05:01:53,218 | INFO     | corecount: 8
[2026-01-09 06:02:26] 2026-01-09 05:01:53,219 | INFO     | event service: False
[2026-01-09 06:02:26] 2026-01-09 05:01:53,219 | INFO     | sizes: {0: 2283798, 1: 2283997, 12: 2283997, 23: 2284025, 33: 2284053, 44: 2284109, 55: 2284265, 66: 2284293, 76: 2284321, 87: 2284377, 98: 2284405, 101: 2284975, 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,219 | INFO     | --------------------------------------------------
[2026-01-09 06:02:26] 2026-01-09 05:01:53,219 | INFO     | 
[2026-01-09 06:02:26] 2026-01-09 05:01:53,219 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 06:02:26] 2026-01-09 05:01:53,256 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,256 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,256 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,256 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,256 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | job 6962919564 has completed (purged errors)
[2026-01-09 06:02:26] 2026-01-09 05:01:53,258 | INFO     | overall cleanup function is called
[2026-01-09 06:02:26] 2026-01-09 05:01:54,267 | INFO     | --- collectZombieJob: --- 10, [5577]
[2026-01-09 06:02:26] 2026-01-09 05:01:54,267 | INFO     | zombie collector waiting for pid 5577
[2026-01-09 06:02:26] 2026-01-09 05:01:54,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:02:26] 2026-01-09 05:01:54,267 | INFO     | collected zombie processes
[2026-01-09 06:02:26] 2026-01-09 05:01:54,267 | INFO     | will attempt to kill all subprocesses of pid=5577
[2026-01-09 06:02:26] 2026-01-09 05:01:54,332 | INFO     | process IDs to be killed: [5577] (in reverse order)
[2026-01-09 06:02:26] 2026-01-09 05:01:54,425 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:02:26] 2026-01-09 05:01:54,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:02:26] 2026-01-09 05:01:54,427 | INFO     | did not find any defunct processes belonging to 5577
[2026-01-09 06:02:26] 2026-01-09 05:01:54,429 | INFO     | did not find any defunct processes belonging to 5577
[2026-01-09 06:02:26] 2026-01-09 05:01:54,429 | INFO     | ready for new job
[2026-01-09 06:02:26] 2026-01-09 05:01:54,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:02:26] 2026-01-09 05:01:54,431 | INFO     | ***************************************
[2026-01-09 06:02:26] 2026-01-09 05:01:54,431 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:02:26] 2026-01-09 05:01:54,431 | INFO     | ***************************************
[2026-01-09 06:02:26] 2026-01-09 05:01:54,431 | INFO     | 
[2026-01-09 06:02:26] 2026-01-09 05:01:54,432 | INFO     | pilot is running in a VM
[2026-01-09 06:02:26] 2026-01-09 05:01:54,432 | INFO     | architecture information:
[2026-01-09 06:02:26] 2026-01-09 05:01:54,435 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:02:26] 2026-01-09 05:01:54,455 | INFO     | cat /etc/os-release:
[2026-01-09 06:02:26] NAME="CentOS Linux"
[2026-01-09 06:02:26] VERSION="7 (Core)"
[2026-01-09 06:02:26] ID="centos"
[2026-01-09 06:02:26] ID_LIKE="rhel fedora"
[2026-01-09 06:02:26] VERSION_ID="7"
[2026-01-09 06:02:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:02:26] ANSI_COLOR="0;31"
[2026-01-09 06:02:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:02:26] HOME_URL="https://www.centos.org/"
[2026-01-09 06:02:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:02:26] 
[2026-01-09 06:02:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:02:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:02:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:02:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:02:26] 
[2026-01-09 06:02:26] 2026-01-09 05:01:54,455 | INFO     | ***************************************
[2026-01-09 06:02:26] 2026-01-09 05:01:54,958 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 06:02:26] 2026-01-09 05:01:54,976 | INFO     | sufficient remaining disk space (497361616896 B)
[2026-01-09 06:02:26] 2026-01-09 05:01:54,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:02:26] 2026-01-09 05:01:54,977 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:02:26] 2026-01-09 05:01:54,977 | INFO     | update_server=False
[2026-01-09 06:02:26] 2026-01-09 05:01:54,977 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:02:26] 2026-01-09 05:01:54,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:02:26] 2026-01-09 05:01:54,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:02:26] 2026-01-09 05:01:54,978 | INFO     | aborting loop
[2026-01-09 06:02:26] 2026-01-09 05:01:55,342 | INFO     | all payload control threads have been joined
[2026-01-09 06:02:26] 2026-01-09 05:01:55,451 | INFO     | all data control threads have been joined
[2026-01-09 06:02:26] 2026-01-09 05:01:55,983 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:55,983 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:55,984 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:55,992 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:02:26] 2026-01-09 05:01:56,235 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,348 | INFO     | [payload] control thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,457 | INFO     | [data] control thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,513 | INFO     | [job] validate thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,645 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:56,650 | INFO     | all job control threads have been joined
[2026-01-09 06:02:26] 2026-01-09 05:01:56,672 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:57,144 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:57,217 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:57,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:02:26] 2026-01-09 05:01:57,656 | INFO     | [job] control thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:01:58,147 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:02:01,492 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:02:05,441 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:02:26] 2026-01-09 05:02:06,446 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:02:26] 2026-01-09 05:02:19,212 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:02:26] 2026-01-09 05:02:21,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540933916480)>', '<ExcThread(monitor, started 140540473480960)>']
[2026-01-09 06:02:26] 2026-01-09 05:02:24,984 | INFO     | PID=31491 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 06:02:26] 2026-01-09 05:02:24,985 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:02:26] 2026-01-09 05:02:24,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:02:26] 2026-01-09 05:02:24,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:02:26] 2026-01-09 05:02:24,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:02:26] 2026-01-09 05:02:24,986 | INFO     | [monitor] control thread has ended
[2026-01-09 06:02:26] 2026-01-09 05:02:26,239 | INFO     | all workflow threads have been joined
[2026-01-09 06:02:26] 2026-01-09 05:02:26,239 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:02:26] 2026-01-09 05:02:26,240 | INFO     | traces error code: 0
[2026-01-09 06:02:26] 2026-01-09 05:02:26,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:02:26] 2026-01-09 05:02:26,399 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:02:26] 2026-01-09 05:02:26,406 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:02:26] 2026-01-09 05:02:26,431 [wrapper] pilotpid: 31491
[2026-01-09 06:02:26] 2026-01-09 05:02:26,449 [wrapper] Pilot exit status: 0
[2026-01-09 06:02:26] 2026-01-09 05:02:26,496 [wrapper] pandaids: 6962919564
[2026-01-09 06:02:26] 2026-01-09 05:02:26,537 [wrapper] cleanup supervisor_pilot  4789 31492
[2026-01-09 06:02:26] 2026-01-09 05:02:26,548 [wrapper] Test setup, not cleaning
[2026-01-09 06:02:26] 2026-01-09 05:02:26,553 [wrapper] apfmon messages muted
[2026-01-09 06:02:26] 2026-01-09 05:02:26,558 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:02:26] 2026-01-09 05:02:26,563 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:02:26]  *** Error codes and diagnostics ***
[2026-01-09 06:02:26]     "exeErrorCode": 0,
[2026-01-09 06:02:26]     "exeErrorDiag": "",
[2026-01-09 06:02:26]     "pilotErrorCode": 0,
[2026-01-09 06:02:26]     "pilotErrorDiag": "",
[2026-01-09 06:02:26]  *** Listing of results directory ***
[2026-01-09 06:02:26] total 439932
[2026-01-09 06:02:26] -rwx------. 1 boinc boinc     36322 Jan  8 09:07 runpilot2-wrapper.sh
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc       100 Jan  9 00:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:02:26] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 00:25 run_atlas
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc       105 Jan  9 00:25 job.xml
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc 224359242 Jan  9 00:25 EVNT.47898824._000337.pool.root.1
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc      6390 Jan  9 00:25 init_data.xml
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:25 start_atlas.sh
[2026-01-09 06:02:26] drwxrwx--x. 2 boinc boinc        68 Jan  9 00:25 shared
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc    592398 Jan  9 00:25 input.tar.gz
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc         0 Jan  9 00:25 boinc_lockfile
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc      2519 Jan  9 00:26 pandaJob.out
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc    989837 Jan  9 00:30 agis_schedconf.cvmfs.json
[2026-01-09 06:02:26] drwx------. 5 boinc boinc      4096 Jan  9 00:30 pilot3
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc 215918311 Jan  9 06:01 HITS.47898826._021354.pool.root.1
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc       531 Jan  9 06:01 boinc_task_state.xml
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc      1016 Jan  9 06:01 memory_monitor_summary.json
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc   1516240 Jan  9 06:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc    517665 Jan  9 06:01 log.47898826._021354.job.log.tgz.1
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc      7780 Jan  9 06:01 heartbeat.json
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc        28 Jan  9 06:02 wrapper_checkpoint.txt
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc      8192 Jan  9 06:02 boinc_mmap_file
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc        95 Jan  9 06:02 pilot_heartbeat.json
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc      4881 Jan  9 06:02 pilotlog.txt
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc   2640071 Jan  9 06:02 log.47898826._021354.job.log.1
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc       357 Jan  9 06:02 output.list
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc       620 Jan  9 06:02 runtime_log
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc   3174400 Jan  9 06:02 result.tar.gz
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc      8817 Jan  9 06:02 runtime_log.err
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc       656 Jan  9 06:02 J1qKDmLE0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8jeKDmGyF71m.diag
[2026-01-09 06:02:26] -rw-r--r--. 1 boinc boinc     20761 Jan  9 06:02 stderr.txt
[2026-01-09 06:02:26] HITS file was successfully produced:
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc 215918311 Jan  9 06:01 shared/HITS.pool.root.1
[2026-01-09 06:02:26]  *** Contents of shared directory: ***
[2026-01-09 06:02:26] total 433660
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc 224359242 Jan  9 00:25 ATLAS.root_0
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:25 start_atlas.sh
[2026-01-09 06:02:26] -rw-r--r--. 2 boinc boinc    592398 Jan  9 00:25 input.tar.gz
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc 215918311 Jan  9 06:01 HITS.pool.root.1
[2026-01-09 06:02:26] -rw-------. 1 boinc boinc   3174400 Jan  9 06:02 result.tar.gz
06:02:27 (27720): run_atlas exited; CPU time 78107.836355
06:02:27 (27720): called boinc_finish(0)

</stderr_txt>
]]>

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