Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:31:35 (19916): wrapper (7.7.26015): starting
23:31:35 (19916): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:31:35] Arguments: --nthreads 8
[2026-01-08 23:31:35] Threads: 8
[2026-01-08 23:31:35] Checking for CVMFS
[2026-01-08 23:31:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:31:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:31:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:31:38] 2.11.2.0 24946 34579 125492 154922 0 60 14573052 25165825 96 130560 0 15723174 99.807 11270631 3356 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 23:31:38] CVMFS is ok
[2026-01-08 23:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:31:38] Checking for apptainer binary...
[2026-01-08 23:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:31:38] Running /usr/bin/apptainer --version
[2026-01-08 23:31:38] apptainer version 1.3.2-1.el7
[2026-01-08 23:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:31:56] cg-vwn407.simple-grid.lan
[2026-01-08 23:31:56] apptainer works
[2026-01-08 23:31:56] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:31:56] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:31:56] Starting ATLAS job with PandaID=6963077040
[2026-01-08 23:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:36:33]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:36:33] 2026-01-09 04:35:47,199 | INFO     | time since job start (21562s) is within the limit (174528.0s)
[2026-01-09 05:36:33] 2026-01-09 04:35:49,204 | INFO     | time since job start (21564s) is within the limit (174528.0s)
[2026-01-09 05:36:33] 2026-01-09 04:35:49,542 | INFO     | monitor loop #1561: job 0:6963077040 is in state 'finished'
[2026-01-09 05:36:33] 2026-01-09 04:35:49,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:36:33] 2026-01-09 04:35:50,354 | INFO     | PID=23642 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:36:33] 2026-01-09 04:35:50,354 | INFO     | .. there are 2 such processes running
[2026-01-09 05:36:33] 2026-01-09 04:35:51,362 | INFO     | time since job start (21566s) is within the limit (174528.0s)
[2026-01-09 05:36:33] 2026-01-09 04:35:51,362 | INFO     | 21579s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 05:36:33] 2026-01-09 04:35:52,050 | INFO     | monitor loop #1562: job 0:6963077040 is in state 'finished'
[2026-01-09 05:36:33] 2026-01-09 04:35:52,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:36:33] 2026-01-09 04:35:53,371 | INFO     | time since job start (21568s) is within the limit (174528.0s)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,554 | INFO     | monitor loop #1563: job 0:6963077040 is in state 'finished'
[2026-01-09 05:36:33] 2026-01-09 04:35:54,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,945 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 05:36:33] 2026-01-09 04:35:54,947 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 05:36:33] 2026-01-09 04:35:54,949 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963077040/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,949 | INFO     | extracted standard info from prmon json
[2026-01-09 05:36:33] 2026-01-09 04:35:54,950 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:36:33] 2026-01-09 04:35:54,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:36:33] 2026-01-09 04:35:54,957 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:36:33] 2026-01-09 04:35:54,958 | INFO     | sum of square deviations: 12512654854.55972
[2026-01-09 05:36:33] 2026-01-09 04:35:54,962 | INFO     | sum of deviations: 133505775689.33807
[2026-01-09 05:36:33] 2026-01-09 04:35:54,962 | INFO     | mean x: 1767922789.8629737
[2026-01-09 05:36:33] 2026-01-09 04:35:54,962 | INFO     | mean y: 2341903.6880466472
[2026-01-09 05:36:33] 2026-01-09 04:35:54,963 | INFO     | intersect: -18860793551.015583
[2026-01-09 05:36:33] 2026-01-09 04:35:54,963 | INFO     | chi2: 38.69228120771365
[2026-01-09 05:36:33] 2026-01-09 04:35:54,964 | INFO     | sum of square deviations: 11973469903.281025
[2026-01-09 05:36:33] 2026-01-09 04:35:54,974 | INFO     | sum of deviations: 230455443720.91095
[2026-01-09 05:36:33] 2026-01-09 04:35:54,980 | INFO     | mean x: 1767922637.3757396
[2026-01-09 05:36:33] 2026-01-09 04:35:54,980 | INFO     | mean y: 2369323.355029586
[2026-01-09 05:36:33] 2026-01-09 04:35:54,980 | INFO     | intersect: -34025143098.00447
[2026-01-09 05:36:33] 2026-01-09 04:35:54,981 | INFO     | chi2: 34.59285889957283
[2026-01-09 05:36:33] 2026-01-09 04:35:54,981 | INFO     | current chi2=34.59285889957283 (change=10.594935682736537 %)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,981 | INFO     | right removable region: 337
[2026-01-09 05:36:33] 2026-01-09 04:35:54,982 | INFO     | sum of square deviations: 11973289343.281025
[2026-01-09 05:36:33] 2026-01-09 04:35:54,986 | INFO     | sum of deviations: 11332895873.499588
[2026-01-09 05:36:33] 2026-01-09 04:35:54,986 | INFO     | mean x: 1767922942.3757396
[2026-01-09 05:36:33] 2026-01-09 04:35:54,986 | INFO     | mean y: 2376451.5
[2026-01-09 05:36:33] 2026-01-09 04:35:54,986 | INFO     | intersect: -1670988823.8124661
[2026-01-09 05:36:33] 2026-01-09 04:35:54,987 | INFO     | chi2: 32.8367090563611
[2026-01-09 05:36:33] 2026-01-09 04:35:54,987 | INFO     | current chi2=32.8367090563611 (change=15.133695839533976 %)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,987 | INFO     | left removable region: 10
[2026-01-09 05:36:33] 2026-01-09 04:35:54,988 | INFO     | sum of square deviations: 10841913154.061148
[2026-01-09 05:36:33] 2026-01-09 04:35:54,991 | INFO     | sum of deviations: 18788918891.385292
[2026-01-09 05:36:33] 2026-01-09 04:35:54,991 | INFO     | mean x: 1767922911.9051988
[2026-01-09 05:36:33] 2026-01-09 04:35:54,992 | INFO     | mean y: 2445612.3027522936
[2026-01-09 05:36:33] 2026-01-09 04:35:54,992 | INFO     | intersect: -3061345780.0462976
[2026-01-09 05:36:33] 2026-01-09 04:35:54,992 | INFO     | chi2: 22.845101251138964
[2026-01-09 05:36:33] 2026-01-09 04:35:54,993 | INFO     | current memory leak: 1.73 B/s (using 327 data points, chi2=22.85)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,993 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | ..............................
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . Timing measurements:
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . get job = 0 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . initial setup = 12 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . payload setup = 183 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . stage-in = 0 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . payload execution = 21047 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . stage-out = 4 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | . log creation = 1 s
[2026-01-09 05:36:33] 2026-01-09 04:35:54,994 | INFO     | ..............................
[2026-01-09 05:36:33] 2026-01-09 04:35:55,172 | INFO     | 
[2026-01-09 05:36:33] 2026-01-09 04:35:55,172 | INFO     | job summary report
[2026-01-09 05:36:33] 2026-01-09 04:35:55,172 | INFO     | --------------------------------------------------
[2026-01-09 05:36:33] 2026-01-09 04:35:55,172 | INFO     | PanDA job id: 6963077040
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | task id: 47947082
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | errors: (none)
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | pilot state: finished 
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | transexitcode: 0
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | exeerrorcode: 0
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | exeerrordiag: 
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | exitcode: 0
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | exitmsg: OK
[2026-01-09 05:36:33] 2026-01-09 04:35:55,173 | INFO     | cpuconsumptiontime: 67278 s
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | nevents: 150
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | neventsw: 0
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | pid: 30147
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | pgrp: 30147
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | corecount: 8
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | event service: False
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | sizes: {0: 2283724, 1: 2284409, 2: 2284608, 13: 2284608, 24: 2284664, 34: 2284692, 45: 2284848, 56: 2284876, 67: 2284904, 77: 2284932, 88: 2284988, 99: 2285296, 10
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | --------------------------------------------------
[2026-01-09 05:36:33] 2026-01-09 04:35:55,174 | INFO     | 
[2026-01-09 05:36:33] 2026-01-09 04:35:55,175 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 05:36:33] 2026-01-09 04:35:55,377 | INFO     | time since job start (21570s) is within the limit (174528.0s)
[2026-01-09 05:36:33] 2026-01-09 04:35:55,757 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,757 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,757 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,757 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:36:33] 2026-01-09 04:35:55,759 | INFO     | job 6963077040 has completed (purged errors)
[2026-01-09 05:36:33] 2026-01-09 04:35:55,760 | INFO     | overall cleanup function is called
[2026-01-09 05:36:33] 2026-01-09 04:35:56,776 | INFO     | --- collectZombieJob: --- 10, [30147]
[2026-01-09 05:36:33] 2026-01-09 04:35:56,776 | INFO     | zombie collector waiting for pid 30147
[2026-01-09 05:36:33] 2026-01-09 04:35:56,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:36:33] 2026-01-09 04:35:56,776 | INFO     | collected zombie processes
[2026-01-09 05:36:33] 2026-01-09 04:35:56,777 | INFO     | will attempt to kill all subprocesses of pid=30147
[2026-01-09 05:36:33] 2026-01-09 04:35:56,864 | INFO     | process IDs to be killed: [30147] (in reverse order)
[2026-01-09 05:36:33] 2026-01-09 04:35:57,954 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:36:33] 2026-01-09 04:35:57,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:36:33] 2026-01-09 04:35:57,956 | INFO     | did not find any defunct processes belonging to 30147
[2026-01-09 05:36:33] 2026-01-09 04:35:57,958 | INFO     | did not find any defunct processes belonging to 30147
[2026-01-09 05:36:33] 2026-01-09 04:35:57,959 | INFO     | ready for new job
[2026-01-09 05:36:33] 2026-01-09 04:35:57,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:36:33] 2026-01-09 04:35:57,961 | INFO     | ***************************************
[2026-01-09 05:36:33] 2026-01-09 04:35:57,961 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:36:33] 2026-01-09 04:35:57,961 | INFO     | ***************************************
[2026-01-09 05:36:33] 2026-01-09 04:35:57,962 | INFO     | 
[2026-01-09 05:36:33] 2026-01-09 04:35:57,969 | INFO     | pilot is running in a VM
[2026-01-09 05:36:33] 2026-01-09 04:35:57,969 | INFO     | architecture information:
[2026-01-09 05:36:33] 2026-01-09 04:35:57,990 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:36:33] 2026-01-09 04:35:58,318 | INFO     | cat /etc/os-release:
[2026-01-09 05:36:33] NAME="CentOS Linux"
[2026-01-09 05:36:33] VERSION="7 (Core)"
[2026-01-09 05:36:33] ID="centos"
[2026-01-09 05:36:33] ID_LIKE="rhel fedora"
[2026-01-09 05:36:33] VERSION_ID="7"
[2026-01-09 05:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:36:33] ANSI_COLOR="0;31"
[2026-01-09 05:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:36:33] HOME_URL="https://www.centos.org/"
[2026-01-09 05:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:36:33] 
[2026-01-09 05:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:36:33] 
[2026-01-09 05:36:33] 2026-01-09 04:35:58,319 | INFO     | ***************************************
[2026-01-09 05:36:33] 2026-01-09 04:35:58,822 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 05:36:33] 2026-01-09 04:35:59,150 | INFO     | sufficient remaining disk space (495757295616 B)
[2026-01-09 05:36:33] 2026-01-09 04:35:59,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:36:33] 2026-01-09 04:35:59,150 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:36:33] 2026-01-09 04:35:59,150 | INFO     | update_server=False
[2026-01-09 05:36:33] 2026-01-09 04:35:59,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:36:33] 2026-01-09 04:35:59,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:36:33] 2026-01-09 04:35:59,384 | INFO     | all data control threads have been joined
[2026-01-09 05:36:33] 2026-01-09 04:35:59,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:36:33] 2026-01-09 04:35:59,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:36:33] 2026-01-09 04:35:59,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:36:33] 2026-01-09 04:35:59,575 | INFO     | will abort loop
[2026-01-09 05:36:33] 2026-01-09 04:35:59,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:36:33] 2026-01-09 04:36:00,119 | INFO     | all job control threads have been joined
[2026-01-09 05:36:33] 2026-01-09 04:36:00,156 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:36:33] 2026-01-09 04:36:00,280 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,379 | INFO     | [job] validate thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,390 | INFO     | [data] control thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,393 | INFO     | all payload control threads have been joined
[2026-01-09 05:36:33] 2026-01-09 04:36:00,452 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,580 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:00,692 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,088 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,125 | INFO     | [job] control thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,158 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,201 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,208 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,308 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,399 | INFO     | [payload] control thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:01,489 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:36:33] 2026-01-09 04:36:01,526 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:03,829 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:36:33] 2026-01-09 04:36:05,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140098970556224)>', '<ExcThread(monitor, started 140098377070336)>']
[2026-01-09 05:36:33] 2026-01-09 04:36:10,736 | INFO     | all workflow threads have been joined
[2026-01-09 05:36:33] 2026-01-09 04:36:10,736 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:36:33] 2026-01-09 04:36:10,737 | INFO     | traces error code: 0
[2026-01-09 05:36:33] 2026-01-09 04:36:10,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:36:33] 2026-01-09 04:36:24,490 [wrapper] supervise_pilot (15 min periods counter: 25)
[2026-01-09 05:36:33] 2026-01-09 04:36:28,510 | INFO     | PID=23642 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:36:33] 2026-01-09 04:36:28,510 | INFO     | .. there are 2 such processes running
[2026-01-09 05:36:33] 2026-01-09 04:36:28,511 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:36:33] 2026-01-09 04:36:28,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:36:33] 2026-01-09 04:36:28,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:36:33] 2026-01-09 04:36:28,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:36:33] 2026-01-09 04:36:28,511 | INFO     | [monitor] control thread has ended
[2026-01-09 05:36:33] 2026-01-09 04:36:28,844 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:36:33] 2026-01-09 04:36:28,978 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:36:33] 2026-01-09 04:36:29,086 [wrapper] pilotpid: 23642
[2026-01-09 05:36:33] 2026-01-09 04:36:29,195 [wrapper] Pilot exit status: 0
[2026-01-09 05:36:33] 2026-01-09 04:36:29,565 [wrapper] pandaids: 6963077040
[2026-01-09 05:36:33] 2026-01-09 04:36:30,585 [wrapper] cleanup supervisor_pilot   767 23643
[2026-01-09 05:36:33] 2026-01-09 04:36:30,690 [wrapper] Test setup, not cleaning
[2026-01-09 05:36:33] 2026-01-09 04:36:30,736 [wrapper] apfmon messages muted
[2026-01-09 05:36:33] 2026-01-09 04:36:30,838 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:36:33] 2026-01-09 04:36:30,952 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:36:33]  *** Error codes and diagnostics ***
[2026-01-09 05:36:33]     "exeErrorCode": 0,
[2026-01-09 05:36:33]     "exeErrorDiag": "",
[2026-01-09 05:36:33]     "pilotErrorCode": 0,
[2026-01-09 05:36:33]     "pilotErrorDiag": "",
[2026-01-09 05:36:33]  *** Listing of results directory ***
[2026-01-09 05:36:33] total 566028
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 05:36:33] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:36:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:31 run_atlas
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:31 job.xml
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc 414398668 Jan  8 23:31 EVNT.47947080._000147.pool.root.1
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:31 start_atlas.sh
[2026-01-09 05:36:33] drwxrwx--x. 2 boinc boinc        68 Jan  8 23:31 shared
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc    592614 Jan  8 23:31 input.tar.gz
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc      6389 Jan  8 23:31 init_data.xml
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:31 boinc_lockfile
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc      2877 Jan  8 23:31 pandaJob.out
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc    989837 Jan  8 23:36 agis_schedconf.cvmfs.json
[2026-01-09 05:36:33] drwx------. 5 boinc boinc      4096 Jan  8 23:36 pilot3
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc       531 Jan  9 04:57 boinc_task_state.xml
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc 152543578 Jan  9 05:33 HITS.47947082._005299.pool.root.1
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc      1022 Jan  9 05:33 memory_monitor_summary.json
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc   1516240 Jan  9 05:33 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc   1462301 Jan  9 05:34 log.47947082._005299.job.log.tgz.1
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc        95 Jan  9 05:35 pilot_heartbeat.json
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc      8607 Jan  9 05:35 heartbeat.json
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc      8192 Jan  9 05:36 boinc_mmap_file
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc        28 Jan  9 05:36 wrapper_checkpoint.txt
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc       820 Jan  9 05:36 pilotlog.txt
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc   2923361 Jan  9 05:36 log.47947082._005299.job.log.1
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc       353 Jan  9 05:36 output.list
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc       620 Jan  9 05:36 runtime_log
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc   4403200 Jan  9 05:36 result.tar.gz
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc      8817 Jan  9 05:36 runtime_log.err
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc       657 Jan  9 05:36 R2hLDmOo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJWkKDmGrVN9m.diag
[2026-01-09 05:36:33] -rw-r--r--. 1 boinc boinc     21360 Jan  9 05:36 stderr.txt
[2026-01-09 05:36:33] HITS file was successfully produced:
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc 152543578 Jan  9 05:33 shared/HITS.pool.root.1
[2026-01-09 05:36:33]  *** Contents of shared directory: ***
[2026-01-09 05:36:33] total 558556
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc 414398668 Jan  8 23:31 ATLAS.root_0
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:31 start_atlas.sh
[2026-01-09 05:36:33] -rw-r--r--. 2 boinc boinc    592614 Jan  8 23:31 input.tar.gz
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc 152543578 Jan  9 05:33 HITS.pool.root.1
[2026-01-09 05:36:33] -rw-------. 1 boinc boinc   4403200 Jan  9 05:36 result.tar.gz
05:36:35 (19916): run_atlas exited; CPU time 67362.579263
05:36:35 (19916): called boinc_finish(0)

</stderr_txt>
]]>

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