Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:33:24 (604765): wrapper (7.7.26015): starting
08:33:24 (604765): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 08:33:24] Arguments: --nthreads 12
[2026-01-08 08:33:24] Threads: 12
[2026-01-08 08:33:24] Checking for CVMFS
[2026-01-08 08:33:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:33:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:33:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:33:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:33:24] 2.11.5.0 3717103 55356 226372 154914 2 529 33528801 45568000 13669 130560 0 375124126 99.776 240169020 23768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 08:33:24] CVMFS is ok
[2026-01-08 08:33:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:33:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:33:24] Further information can be found at the LHC@home message board.
[2026-01-08 08:33:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:33:24] Checking for apptainer binary...
[2026-01-08 08:33:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:33:24] Running /usr/bin/apptainer --version
[2026-01-08 08:33:24] apptainer version 1.4.1-1.el9
[2026-01-08 08:33:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:33:24] wns0080.triumf.lcg
[2026-01-08 08:33:24] apptainer works
[2026-01-08 08:33:24] Set ATHENA_PROC_NUMBER=12
[2026-01-08 08:33:24] Set ATHENA_CORE_NUMBER=12
[2026-01-08 08:33:24] Starting ATLAS job with PandaID=6963077075
[2026-01-08 08:33:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:37:39]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | WARNING  | wrong length of table data, x=[1767890037.0, 1767890098.0], y=[2483.0, 253988.0] (must be same and length>=4)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | INFO     | could have reported an average CPU frequency of 2748 MHz (4 samples)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . Timing measurements:
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . get job = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . initial setup = 2 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload setup = 4 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-in = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload execution = 67 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-out = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . log creation = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077075/pilotlog.txt
[2026-01-08 08:37:39] 2026-01-08 16:37:04,163 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 08:37:39] - Log from pilotlog.txt -
[2026-01-08 08:37:39] 2026-01-08 16:37:04,151 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963077075/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | INFO     | extracted standard info from prmon json
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | WARNING  | wrong length of table data, x=[1767890037.0, 1767890098.0], y=[2483.0, 253988.0] (must be same and length>=4)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | INFO     | could have reported an average CPU frequency of 2748 MHz (4 samples)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . Timing measurements:
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . get job = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . initial setup = 2 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload setup = 4 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-in = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload execution = 67 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-out = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . log creation = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077075/pilotlog.txt
[2026-01-08 08:37:39] 2026-01-08 16:37:04,163 | WARNING  | 
[2026-01-08 08:37:39] [begin log extracts]
[2026-01-08 08:37:39] - Log from pilotlog.txt -
[2026-01-08 08:37:39] 2026-01-08 16:37:04,151 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963077075/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | INFO     | extracted standard info from prmon json
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:37:39] 2026-01-08 16:37:04,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | WARNING  | wrong length of table data, x=[1767890037.0, 1767890098.0], y=[2483.0, 253988.0] (must be same and length>=4)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,153 | INFO     | could have reported an average CPU frequency of 2748 MHz (4 samples)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . Timing measurements:
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . get job = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . initial setup = 2 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload setup = 4 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-in = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . payload execution = 67 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . stage-out = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | . log creation = 0 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | ..............................
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:37:39] 2026-01-08 16:37:04,154 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963077075/pilotlog.txt
[2026-01-08 08:37:39] [end log extracts]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,163 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,164 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 08:37:39] 2026-01-08 16:37:04,232 | INFO     | 
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | job summary report
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | --------------------------------------------------
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | PanDA job id: 6963077075
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | task id: 47947082
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 08:34:56,422 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | pilot state: failed 
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | transexitcode: 65
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | exeerrorcode: 65
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | exitcode: 65
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | cpuconsumptiontime: 40 s
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | nevents: 0
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | neventsw: 0
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | pid: 615068
[2026-01-08 08:37:39] 2026-01-08 16:37:04,233 | INFO     | pgrp: 615068
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | corecount: 12
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | event service: False
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | sizes: {0: 2284549, 4: 2284811, 11: 2284839, 75: 2310268, 76: 2310244, 77: 2314590, 78: 2314774, 196: 2314968}
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | --------------------------------------------------
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | 
[2026-01-08 08:37:39] 2026-01-08 16:37:04,234 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | job 6963077075 has completed (purged errors)
[2026-01-08 08:37:39] 2026-01-08 16:37:04,249 | INFO     | overall cleanup function is called
[2026-01-08 08:37:39] 2026-01-08 16:37:05,255 | INFO     | --- collectZombieJob: --- 10, [615068]
[2026-01-08 08:37:39] 2026-01-08 16:37:05,255 | INFO     | zombie collector waiting for pid 615068
[2026-01-08 08:37:39] 2026-01-08 16:37:05,255 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:37:39] 2026-01-08 16:37:05,255 | INFO     | collected zombie processes
[2026-01-08 08:37:39] 2026-01-08 16:37:05,255 | INFO     | will attempt to kill all subprocesses of pid=615068
[2026-01-08 08:37:39] 2026-01-08 16:37:05,441 | INFO     | process IDs to be killed: [615068] (in reverse order)
[2026-01-08 08:37:39] 2026-01-08 16:37:05,509 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:37:39] 2026-01-08 16:37:05,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:37:39] 2026-01-08 16:37:05,517 | INFO     | did not find any defunct processes belonging to 615068
[2026-01-08 08:37:39] 2026-01-08 16:37:05,524 | INFO     | did not find any defunct processes belonging to 615068
[2026-01-08 08:37:39] 2026-01-08 16:37:05,524 | INFO     | ready for new job
[2026-01-08 08:37:39] 2026-01-08 16:37:05,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:37:39] 2026-01-08 16:37:05,525 | INFO     | ***************************************
[2026-01-08 08:37:39] 2026-01-08 16:37:05,526 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:37:39] 2026-01-08 16:37:05,526 | INFO     | ***************************************
[2026-01-08 08:37:39] 2026-01-08 16:37:05,526 | INFO     | 
[2026-01-08 08:37:39] 2026-01-08 16:37:05,527 | INFO     | architecture information:
[2026-01-08 08:37:39] 2026-01-08 16:37:05,528 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:37:39] 2026-01-08 16:37:05,536 | INFO     | cat /etc/os-release:
[2026-01-08 08:37:39] NAME="CentOS Linux"
[2026-01-08 08:37:39] VERSION="7 (Core)"
[2026-01-08 08:37:39] ID="centos"
[2026-01-08 08:37:39] ID_LIKE="rhel fedora"
[2026-01-08 08:37:39] VERSION_ID="7"
[2026-01-08 08:37:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:37:39] ANSI_COLOR="0;31"
[2026-01-08 08:37:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:37:39] HOME_URL="https://www.centos.org/"
[2026-01-08 08:37:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:37:39] 
[2026-01-08 08:37:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:37:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:37:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:37:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:37:39] 
[2026-01-08 08:37:39] 2026-01-08 16:37:05,537 | INFO     | ***************************************
[2026-01-08 08:37:39] 2026-01-08 16:37:06,039 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 08:37:39] 2026-01-08 16:37:06,050 | INFO     | sufficient remaining disk space (2168477188096 B)
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | INFO     | update_server=False
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:37:39] 2026-01-08 16:37:06,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:37:39] 2026-01-08 16:37:06,052 | INFO     | aborting loop
[2026-01-08 08:37:39] 2026-01-08 16:37:06,336 | INFO     | all payload control threads have been joined
[2026-01-08 08:37:39] 2026-01-08 16:37:07,054 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,057 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,057 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,068 | INFO     | all data control threads have been joined
[2026-01-08 08:37:39] 2026-01-08 16:37:07,085 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,341 | INFO     | [payload] control thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,473 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,510 | INFO     | all job control threads have been joined
[2026-01-08 08:37:39] 2026-01-08 16:37:07,613 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,654 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:07,686 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,036 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,057 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,073 | INFO     | [data] control thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,354 | INFO     | [job] validate thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,467 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,515 | INFO     | [job] control thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:08,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:37:39] 2026-01-08 16:37:12,961 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:37:39] 2026-01-08 16:37:33,517 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:37:39] 2026-01-08 16:37:34,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420285146944)>', '<ExcThread(monitor, started 140419383944960)>']
[2026-01-08 08:37:39] 2026-01-08 16:37:36,867 | INFO     | PID=608460 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 08:37:39] 2026-01-08 16:37:36,867 | INFO     | .. there are 33 such processes running
[2026-01-08 08:37:39] 2026-01-08 16:37:36,869 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:37:39] 2026-01-08 16:37:36,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:37:39] 2026-01-08 16:37:36,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:37:39] 2026-01-08 16:37:36,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:37:39] 2026-01-08 16:37:36,869 | INFO     | [monitor] control thread has ended
[2026-01-08 08:37:39] 2026-01-08 16:37:39,696 | INFO     | all workflow threads have been joined
[2026-01-08 08:37:39] 2026-01-08 16:37:39,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:37:39] 2026-01-08 16:37:39,696 | INFO     | traces error code: 0
[2026-01-08 08:37:39] 2026-01-08 16:37:39,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:37:39] 2026-01-08 16:37:39,786 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:37:39] 2026-01-08 16:37:39,788 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:37:39] 2026-01-08 16:37:39,789 [wrapper] pilotpid: 608460
[2026-01-08 08:37:39] 2026-01-08 16:37:39,791 [wrapper] Pilot exit status: 0
[2026-01-08 08:37:39] 2026-01-08 16:37:39,797 [wrapper] pandaids: 6963077075
[2026-01-08 08:37:39] 2026-01-08 16:37:39,840 [wrapper] cleanup supervisor_pilot  608466 608461
[2026-01-08 08:37:39] 2026-01-08 16:37:39,841 [wrapper] Test setup, not cleaning
[2026-01-08 08:37:39] 2026-01-08 16:37:39,843 [wrapper] apfmon messages muted
[2026-01-08 08:37:39] 2026-01-08 16:37:39,844 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:37:39] 2026-01-08 16:37:39,846 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:37:39]  *** Error codes and diagnostics ***
[2026-01-08 08:37:39]     "exeErrorCode": 65,
[2026-01-08 08:37:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-08 08:37:39]     "pilotErrorCode": 1305,
[2026-01-08 08:37:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-08 08:37:39]  *** Listing of results directory ***
[2026-01-08 08:37:39] total 412016
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc    579449 Jan  8 03:09 pilot3.tar.gz
[2026-01-08 08:37:39] -rwx------. 1 boinc boinc     36322 Jan  8 03:57 runpilot2-wrapper.sh
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc      5112 Jan  8 03:57 queuedata.json
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc       100 Jan  8 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:37:39] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 08:33 run_atlas
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc       105 Jan  8 08:33 job.xml
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc      6594 Jan  8 08:33 init_data.xml
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc 417709010 Jan  8 08:33 EVNT.47947080._000150.pool.root.1
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:33 start_atlas.sh
[2026-01-08 08:37:39] drwxrwx--x. 2 boinc boinc      4096 Jan  8 08:33 shared
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc    592613 Jan  8 08:33 input.tar.gz
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc         0 Jan  8 08:33 boinc_lockfile
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc      2877 Jan  8 08:33 pandaJob.out
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc    989837 Jan  8 08:33 agis_schedconf.cvmfs.json
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc   1516240 Jan  8 08:33 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:37:39] drwx------. 5 boinc boinc      4096 Jan  8 08:33 pilot3
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc       524 Jan  8 08:34 boinc_task_state.xml
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc      1011 Jan  8 08:35 memory_monitor_summary.json
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc     48084 Jan  8 08:35 log.47947082._005334.job.log.tgz.1
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc     10333 Jan  8 08:37 heartbeat.json
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc        95 Jan  8 08:37 pilot_heartbeat.json
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc      8192 Jan  8 08:37 boinc_mmap_file
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc        23 Jan  8 08:37 wrapper_checkpoint.txt
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc      4822 Jan  8 08:37 pilotlog.txt
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc     91652 Jan  8 08:37 log.47947082._005334.job.log.1
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc       186 Jan  8 08:37 output.list
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc       620 Jan  8 08:37 runtime_log
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc    163840 Jan  8 08:37 result.tar.gz
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc      8636 Jan  8 08:37 runtime_log.err
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc       645 Jan  8 08:37 agkLDmZo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJIfKDm27aojm.diag
[2026-01-08 08:37:39] -rw-r--r--. 1 boinc boinc     22346 Jan  8 08:37 stderr.txt
[2026-01-08 08:37:39] No HITS result produced
[2026-01-08 08:37:39]  *** Contents of shared directory: ***
[2026-01-08 08:37:39] total 408680
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc 417709010 Jan  8 08:33 ATLAS.root_0
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:33 start_atlas.sh
[2026-01-08 08:37:39] -rw-r--r--. 2 boinc boinc    592613 Jan  8 08:33 input.tar.gz
[2026-01-08 08:37:39] -rw-------. 1 boinc boinc    163840 Jan  8 08:37 result.tar.gz
08:37:41 (604765): run_atlas exited; CPU time 39.356595
08:37:41 (604765): called boinc_finish(0)

</stderr_txt>
]]>

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