Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:11 (74332): wrapper (7.7.26015): starting
08:23:11 (74332): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 08:23:11] Arguments: --nthreads 12
[2026-01-08 08:23:11] Threads: 12
[2026-01-08 08:23:11] Checking for CVMFS
[2026-01-08 08:23:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 08:23:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 08:23:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 08:23:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 08:23:12] 2.11.5.0 143847 90211 209528 154914 2 24 24832285 45568000 14182 130560 0 693801764 99.780 462482268 21432 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 08:23:12] CVMFS is ok
[2026-01-08 08:23:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 08:23:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 08:23:12] Further information can be found at the LHC@home message board.
[2026-01-08 08:23:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 08:23:12] Checking for apptainer binary...
[2026-01-08 08:23:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 08:23:12] Running /usr/bin/apptainer --version
[2026-01-08 08:23:12] apptainer version 1.4.1-1.el9
[2026-01-08 08:23:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 08:23:12] wns0057.triumf.lcg
[2026-01-08 08:23:12] apptainer works
[2026-01-08 08:23:12] Set ATHENA_PROC_NUMBER=12
[2026-01-08 08:23:12] Set ATHENA_CORE_NUMBER=12
[2026-01-08 08:23:12] Starting ATLAS job with PandaID=6963078290
[2026-01-08 08:23:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:27:29]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | WARNING  | wrong length of table data, x=[1767889432.0], y=[1205.0] (must be same and length>=4)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . Timing measurements:
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . get job = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . initial setup = 2 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload setup = 5 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-in = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload execution = 61 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-out = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . log creation = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078290/pilotlog.txt
[2026-01-08 08:27:29] 2026-01-08 16:26:50,539 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 08:27:29] - Log from pilotlog.txt -
[2026-01-08 08:27:29] 2026-01-08 16:26:50,525 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963078290/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | INFO     | extracted standard info from prmon json
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | WARNING  | wrong length of table data, x=[1767889432.0], y=[1205.0] (must be same and length>=4)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . Timing measurements:
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . get job = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . initial setup = 2 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload setup = 5 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-in = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload execution = 61 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-out = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . log creation = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078290/pilotlog.txt
[2026-01-08 08:27:29] 2026-01-08 16:26:50,539 | WARNING  | 
[2026-01-08 08:27:29] [begin log extracts]
[2026-01-08 08:27:29] - Log from pilotlog.txt -
[2026-01-08 08:27:29] 2026-01-08 16:26:50,525 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963078290/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | INFO     | extracted standard info from prmon json
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:27:29] 2026-01-08 16:26:50,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | WARNING  | wrong length of table data, x=[1767889432.0], y=[1205.0] (must be same and length>=4)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,527 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . Timing measurements:
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . get job = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . initial setup = 2 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload setup = 5 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-in = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . payload execution = 61 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . stage-out = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | . log creation = 0 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | ..............................
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 08:27:29] 2026-01-08 16:26:50,528 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963078290/pilotlog.txt
[2026-01-08 08:27:29] [end log extracts]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,539 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,540 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | 
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | job summary report
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | --------------------------------------------------
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | PanDA job id: 6963078290
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | task id: 47962010
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 08:24:42,234 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | error 2/2: 1165: Local output file is missing
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:27:29] 2026-01-08 16:26:50,834 | INFO     | pilot state: failed 
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | transexitcode: 65
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | exeerrorcode: 65
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | exitcode: 65
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | cpuconsumptiontime: 42 s
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | nevents: 0
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | neventsw: 0
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | pid: 84537
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | pgrp: 84537
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | corecount: 12
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | event service: False
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | sizes: {0: 2284616, 1: 2284616, 5: 2284906, 11: 2284962, 70: 2314685, 72: 2314685, 192: 2314979}
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | --------------------------------------------------
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | 
[2026-01-08 08:27:29] 2026-01-08 16:26:50,835 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | job 6963078290 has completed (purged errors)
[2026-01-08 08:27:29] 2026-01-08 16:26:50,852 | INFO     | overall cleanup function is called
[2026-01-08 08:27:29] 2026-01-08 16:26:51,862 | INFO     | --- collectZombieJob: --- 10, [84537]
[2026-01-08 08:27:29] 2026-01-08 16:26:51,862 | INFO     | zombie collector waiting for pid 84537
[2026-01-08 08:27:29] 2026-01-08 16:26:51,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:27:29] 2026-01-08 16:26:51,863 | INFO     | collected zombie processes
[2026-01-08 08:27:29] 2026-01-08 16:26:51,863 | INFO     | will attempt to kill all subprocesses of pid=84537
[2026-01-08 08:27:29] 2026-01-08 16:26:52,040 | INFO     | process IDs to be killed: [84537] (in reverse order)
[2026-01-08 08:27:29] 2026-01-08 16:26:52,106 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:27:29] 2026-01-08 16:26:52,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:27:29] 2026-01-08 16:26:52,114 | INFO     | did not find any defunct processes belonging to 84537
[2026-01-08 08:27:29] 2026-01-08 16:26:52,122 | INFO     | did not find any defunct processes belonging to 84537
[2026-01-08 08:27:29] 2026-01-08 16:26:52,123 | INFO     | ready for new job
[2026-01-08 08:27:29] 2026-01-08 16:26:52,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:27:29] 2026-01-08 16:26:52,125 | INFO     | ***************************************
[2026-01-08 08:27:29] 2026-01-08 16:26:52,125 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:27:29] 2026-01-08 16:26:52,125 | INFO     | ***************************************
[2026-01-08 08:27:29] 2026-01-08 16:26:52,125 | INFO     | 
[2026-01-08 08:27:29] 2026-01-08 16:26:52,127 | INFO     | architecture information:
[2026-01-08 08:27:29] 2026-01-08 16:26:52,127 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:27:29] 2026-01-08 16:26:52,142 | INFO     | cat /etc/os-release:
[2026-01-08 08:27:29] NAME="CentOS Linux"
[2026-01-08 08:27:29] VERSION="7 (Core)"
[2026-01-08 08:27:29] ID="centos"
[2026-01-08 08:27:29] ID_LIKE="rhel fedora"
[2026-01-08 08:27:29] VERSION_ID="7"
[2026-01-08 08:27:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:27:29] ANSI_COLOR="0;31"
[2026-01-08 08:27:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:27:29] HOME_URL="https://www.centos.org/"
[2026-01-08 08:27:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:27:29] 
[2026-01-08 08:27:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:27:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:27:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:27:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:27:29] 
[2026-01-08 08:27:29] 2026-01-08 16:26:52,142 | INFO     | ***************************************
[2026-01-08 08:27:29] 2026-01-08 16:26:52,645 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 08:27:29] 2026-01-08 16:26:52,658 | INFO     | sufficient remaining disk space (2132569751552 B)
[2026-01-08 08:27:29] 2026-01-08 16:26:52,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:27:29] 2026-01-08 16:26:52,659 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:27:29] 2026-01-08 16:26:52,659 | INFO     | update_server=False
[2026-01-08 08:27:29] 2026-01-08 16:26:52,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:27:29] 2026-01-08 16:26:52,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:27:29] 2026-01-08 16:26:52,827 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 08:27:29] 2026-01-08 16:26:52,828 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 08:27:29] 2026-01-08 16:26:52,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:27:29] 2026-01-08 16:26:52,828 | INFO     | will abort loop
[2026-01-08 08:27:29] 2026-01-08 16:26:53,352 | INFO     | all payload control threads have been joined
[2026-01-08 08:27:29] 2026-01-08 16:26:53,664 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:53,694 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:53,698 | INFO     | all data control threads have been joined
[2026-01-08 08:27:29] 2026-01-08 16:26:53,833 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:53,883 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:53,971 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:27:29] 2026-01-08 16:26:54,113 | INFO     | all job control threads have been joined
[2026-01-08 08:27:29] 2026-01-08 16:26:54,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,358 | INFO     | [payload] control thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,704 | INFO     | [data] control thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,812 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,908 | INFO     | [job] validate thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:54,980 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:55,052 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:55,094 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:55,120 | INFO     | [job] control thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:55,608 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:27:29] 2026-01-08 16:26:56,614 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:26:58,097 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:27:29] 2026-01-08 16:27:22,984 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:27:29] 2026-01-08 16:27:23,751 | INFO     | PID=77989 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 08:27:29] 2026-01-08 16:27:23,752 | INFO     | .. there are 25 such processes running
[2026-01-08 08:27:29] 2026-01-08 16:27:23,753 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:27:29] 2026-01-08 16:27:23,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:27:29] 2026-01-08 16:27:23,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:27:29] 2026-01-08 16:27:24,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139780578125632)>', '<ExcThread(monitor, started 139780257978112)>']
[2026-01-08 08:27:29] 2026-01-08 16:27:24,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:27:29] 2026-01-08 16:27:24,759 | INFO     | [monitor] control thread has ended
[2026-01-08 08:27:29] 2026-01-08 16:27:29,367 | INFO     | all workflow threads have been joined
[2026-01-08 08:27:29] 2026-01-08 16:27:29,368 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:27:29] 2026-01-08 16:27:29,368 | INFO     | traces error code: 0
[2026-01-08 08:27:29] 2026-01-08 16:27:29,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:27:29] 2026-01-08 16:27:29,539 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:27:29] 2026-01-08 16:27:29,543 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:27:29] 2026-01-08 16:27:29,546 [wrapper] pilotpid: 77989
[2026-01-08 08:27:29] 2026-01-08 16:27:29,548 [wrapper] Pilot exit status: 0
[2026-01-08 08:27:29] 2026-01-08 16:27:29,560 [wrapper] pandaids: 6963078290
[2026-01-08 08:27:29] 2026-01-08 16:27:29,603 [wrapper] cleanup supervisor_pilot   77996 77991
[2026-01-08 08:27:29] 2026-01-08 16:27:29,606 [wrapper] Test setup, not cleaning
[2026-01-08 08:27:29] 2026-01-08 16:27:29,608 [wrapper] apfmon messages muted
[2026-01-08 08:27:29] 2026-01-08 16:27:29,610 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:27:29] 2026-01-08 16:27:29,612 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:27:29]  *** Error codes and diagnostics ***
[2026-01-08 08:27:29]     "exeErrorCode": 65,
[2026-01-08 08:27:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2026-01-08 08:27:29]     "pilotErrorCode": 1305,
[2026-01-08 08:27:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2026-01-08 08:27:29]  *** Listing of results directory ***
[2026-01-08 08:27:29] total 389564
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc    579449 Jan  8 03:09 pilot3.tar.gz
[2026-01-08 08:27:29] -rwx------. 1 boinc boinc     36322 Jan  8 03:56 runpilot2-wrapper.sh
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc      5112 Jan  8 03:57 queuedata.json
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc       100 Jan  8 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:27:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 08:23 run_atlas
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc       105 Jan  8 08:23 job.xml
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc      6594 Jan  8 08:23 init_data.xml
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc 394716078 Jan  8 08:23 EVNT.47962006._000049.pool.root.1
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:23 start_atlas.sh
[2026-01-08 08:27:29] drwxrwx--x. 2 boinc boinc      4096 Jan  8 08:23 shared
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc    592606 Jan  8 08:23 input.tar.gz
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc         0 Jan  8 08:23 boinc_lockfile
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc      2890 Jan  8 08:23 pandaJob.out
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc    989837 Jan  8 08:23 agis_schedconf.cvmfs.json
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc   1516240 Jan  8 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:27:29] drwx------. 5 boinc boinc      4096 Jan  8 08:23 pilot3
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc       523 Jan  8 08:24 boinc_task_state.xml
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc       954 Jan  8 08:24 memory_monitor_summary.json
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc     47896 Jan  8 08:24 log.47962010._000427.job.log.tgz.1
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc     10319 Jan  8 08:26 heartbeat.json
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc        95 Jan  8 08:27 pilot_heartbeat.json
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc        23 Jan  8 08:27 wrapper_checkpoint.txt
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 08:27 boinc_mmap_file
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc      5007 Jan  8 08:27 pilotlog.txt
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc     91141 Jan  8 08:27 log.47962010._000427.job.log.1
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc       186 Jan  8 08:27 output.list
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 08:27 runtime_log
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc    163840 Jan  8 08:27 result.tar.gz
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc      8636 Jan  8 08:27 runtime_log.err
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc       647 Jan  8 08:27 o5HLDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeHfKDmYv6iDm.diag
[2026-01-08 08:27:29] -rw-r--r--. 1 boinc boinc     22273 Jan  8 08:27 stderr.txt
[2026-01-08 08:27:29] No HITS result produced
[2026-01-08 08:27:29]  *** Contents of shared directory: ***
[2026-01-08 08:27:29] total 386228
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc 394716078 Jan  8 08:23 ATLAS.root_0
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc     15847 Jan  8 08:23 start_atlas.sh
[2026-01-08 08:27:29] -rw-r--r--. 2 boinc boinc    592606 Jan  8 08:23 input.tar.gz
[2026-01-08 08:27:29] -rw-------. 1 boinc boinc    163840 Jan  8 08:27 result.tar.gz
08:27:31 (74332): run_atlas exited; CPU time 41.023377
08:27:31 (74332): called boinc_finish(0)

</stderr_txt>
]]>

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