Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:50:33 (23046): wrapper (7.7.26015): starting
02:50:33 (23046): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:50:33] Arguments: --nthreads 8
[2026-01-09 02:50:33] Threads: 8
[2026-01-09 02:50:33] Checking for CVMFS
[2026-01-09 02:50:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:50:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:50:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:50:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:50:36] 2.11.2.0 3545 34775 93128 154926 2 60 21468906 25165825 96 130560 0 17356671 99.835 8623925 2701 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 02:50:36] CVMFS is ok
[2026-01-09 02:50:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:50:37] Checking for apptainer binary...
[2026-01-09 02:50:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:50:37] Running /usr/bin/apptainer --version
[2026-01-09 02:50:37] apptainer version 1.3.2-1.el7
[2026-01-09 02:50:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:50:56] cg-vwn466.simple-grid.lan
[2026-01-09 02:50:56] apptainer works
[2026-01-09 02:50:56] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:50:56] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:50:57] Starting ATLAS job with PandaID=6963078249
[2026-01-09 02:50:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 10:00:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 10:00:01] 2026-01-09 08:59:13,930 | INFO     | chi2: 18.928354719484947
[2026-01-09 10:00:01] 2026-01-09 08:59:13,930 | INFO     | current chi2=18.928354719484947 (change=9.127902037826432 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,930 | INFO     | right removable region: 402
[2026-01-09 10:00:01] 2026-01-09 08:59:13,931 | INFO     | sum of square deviations: 20293509743.776764
[2026-01-09 10:00:01] 2026-01-09 08:59:13,936 | INFO     | sum of deviations: 640063028715.2329
[2026-01-09 10:00:01] 2026-01-09 08:59:13,937 | INFO     | mean x: 1767936851.3349876
[2026-01-09 10:00:01] 2026-01-09 08:59:13,937 | INFO     | mean y: 2631035.6501240693
[2026-01-09 10:00:01] 2026-01-09 08:59:13,937 | INFO     | intersect: -55758596565.19698
[2026-01-09 10:00:01] 2026-01-09 08:59:13,937 | INFO     | chi2: 14.91484583113635
[2026-01-09 10:00:01] 2026-01-09 08:59:13,938 | INFO     | current chi2=14.91484583113635 (change=28.396136296910107 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,938 | INFO     | sum of square deviations: 19547398765.708626
[2026-01-09 10:00:01] 2026-01-09 08:59:13,943 | INFO     | sum of deviations: 494297768903.10583
[2026-01-09 10:00:01] 2026-01-09 08:59:13,943 | INFO     | mean x: 1767937003.839196
[2026-01-09 10:00:01] 2026-01-09 08:59:13,943 | INFO     | mean y: 2660824.9547738694
[2026-01-09 10:00:01] 2026-01-09 08:59:13,943 | INFO     | intersect: -44703406055.51368
[2026-01-09 10:00:01] 2026-01-09 08:59:13,944 | INFO     | chi2: 10.398040393047907
[2026-01-09 10:00:01] 2026-01-09 08:59:13,944 | INFO     | current chi2=10.398040393047907 (change=30.283956597520607 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,945 | INFO     | sum of square deviations: 18819799762.626038
[2026-01-09 10:00:01] 2026-01-09 08:59:13,950 | INFO     | sum of deviations: 364624496094.1221
[2026-01-09 10:00:01] 2026-01-09 08:59:13,950 | INFO     | mean x: 1767937156.3435113
[2026-01-09 10:00:01] 2026-01-09 08:59:13,950 | INFO     | mean y: 2687997.3027989822
[2026-01-09 10:00:01] 2026-01-09 08:59:13,950 | INFO     | intersect: -34250237266.971027
[2026-01-09 10:00:01] 2026-01-09 08:59:13,951 | INFO     | chi2: 7.029150880023137
[2026-01-09 10:00:01] 2026-01-09 08:59:13,951 | INFO     | current chi2=7.029150880023137 (change=32.39927318687085 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,952 | INFO     | sum of square deviations: 18110480172.028458
[2026-01-09 10:00:01] 2026-01-09 08:59:13,956 | INFO     | sum of deviations: 236759917566.59045
[2026-01-09 10:00:01] 2026-01-09 08:59:13,956 | INFO     | mean x: 1767937308.847938
[2026-01-09 10:00:01] 2026-01-09 08:59:13,957 | INFO     | mean y: 2715502.925257732
[2026-01-09 10:00:01] 2026-01-09 08:59:13,957 | INFO     | intersect: -23109686130.258778
[2026-01-09 10:00:01] 2026-01-09 08:59:13,957 | INFO     | chi2: 3.8464398597607348
[2026-01-09 10:00:01] 2026-01-09 08:59:13,958 | INFO     | current chi2=3.8464398597607348 (change=45.27874098289274 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,958 | INFO     | sum of square deviations: 17419230855.11749
[2026-01-09 10:00:01] 2026-01-09 08:59:13,963 | INFO     | sum of deviations: 153591804833.83267
[2026-01-09 10:00:01] 2026-01-09 08:59:13,963 | INFO     | mean x: 1767937461.3498695
[2026-01-09 10:00:01] 2026-01-09 08:59:13,963 | INFO     | mean y: 2733796.6579634463
[2026-01-09 10:00:01] 2026-01-09 08:59:13,963 | INFO     | intersect: -15585825065.704004
[2026-01-09 10:00:01] 2026-01-09 08:59:13,964 | INFO     | chi2: 2.3847055531300496
[2026-01-09 10:00:01] 2026-01-09 08:59:13,964 | INFO     | current chi2=2.3847055531300496 (change=38.00226598945476 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,965 | INFO     | sum of square deviations: 16745889520.476206
[2026-01-09 10:00:01] 2026-01-09 08:59:13,969 | INFO     | sum of deviations: 134512157481.143
[2026-01-09 10:00:01] 2026-01-09 08:59:13,969 | INFO     | mean x: 1767937613.8412697
[2026-01-09 10:00:01] 2026-01-09 08:59:13,970 | INFO     | mean y: 2738115.619047619
[2026-01-09 10:00:01] 2026-01-09 08:59:13,970 | INFO     | intersect: -14198305217.377361
[2026-01-09 10:00:01] 2026-01-09 08:59:13,970 | INFO     | chi2: 2.3562306791802405
[2026-01-09 10:00:01] 2026-01-09 08:59:13,970 | INFO     | current chi2=2.3562306791802405 (change=1.1940624666401405 %)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,971 | INFO     | left removable region: 60
[2026-01-09 10:00:01] 2026-01-09 08:59:13,971 | INFO     | sum of square deviations: 12402598918.842104
[2026-01-09 10:00:01] 2026-01-09 08:59:13,975 | INFO     | sum of deviations: 181910649541.47345
[2026-01-09 10:00:01] 2026-01-09 08:59:13,975 | INFO     | mean x: 1767938345.7894738
[2026-01-09 10:00:01] 2026-01-09 08:59:13,975 | INFO     | mean y: 2775469.0204678364
[2026-01-09 10:00:01] 2026-01-09 08:59:13,975 | INFO     | intersect: -25927823023.7885
[2026-01-09 10:00:01] 2026-01-09 08:59:13,976 | INFO     | chi2: 0.12484168028970005
[2026-01-09 10:00:01] 2026-01-09 08:59:13,976 | INFO     | current memory leak: 14.67 B/s (using 342 data points, chi2=0.12)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,977 | INFO     | could have reported an average CPU frequency of 2250 MHz (16 samples)
[2026-01-09 10:00:01] 2026-01-09 08:59:13,977 | INFO     | ..............................
[2026-01-09 10:00:01] 2026-01-09 08:59:13,977 | INFO     | . Timing measurements:
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . get job = 0 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . initial setup = 11 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . payload setup = 192 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . stage-in = 0 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . payload execution = 25025 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . stage-out = 1 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | . log creation = 0 s
[2026-01-09 10:00:01] 2026-01-09 08:59:13,978 | INFO     | ..............................
[2026-01-09 10:00:01] 2026-01-09 08:59:14,165 | INFO     | 
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | job summary report
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | --------------------------------------------------
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | PanDA job id: 6963078249
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | task id: 47962010
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | errors: (none)
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 10:00:01] 2026-01-09 08:59:14,166 | INFO     | pilot state: finished 
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | transexitcode: 0
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | exeerrorcode: 0
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | exeerrordiag: 
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | exitcode: 0
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | exitmsg: OK
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | cpuconsumptiontime: 155821 s
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | nevents: 450
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | neventsw: 0
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | pid: 847
[2026-01-09 10:00:01] 2026-01-09 08:59:14,167 | INFO     | pgrp: 847
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | corecount: 8
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | event service: False
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | sizes: {0: 2283791, 1: 2284647, 2: 2284675, 12: 2284675, 23: 2284703, 34: 2284731, 45: 2284887, 55: 2284915, 66: 2284943, 77: 2284971, 87: 2285027, 98: 2285335, 10
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | --------------------------------------------------
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | 
[2026-01-09 10:00:01] 2026-01-09 08:59:14,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,198 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 10:00:01] 2026-01-09 08:59:14,199 | INFO     | job 6963078249 has completed (purged errors)
[2026-01-09 10:00:01] 2026-01-09 08:59:14,199 | INFO     | overall cleanup function is called
[2026-01-09 10:00:01] 2026-01-09 08:59:15,213 | INFO     | --- collectZombieJob: --- 10, [847]
[2026-01-09 10:00:01] 2026-01-09 08:59:15,214 | INFO     | zombie collector waiting for pid 847
[2026-01-09 10:00:01] 2026-01-09 08:59:15,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 10:00:01] 2026-01-09 08:59:15,214 | INFO     | collected zombie processes
[2026-01-09 10:00:01] 2026-01-09 08:59:15,214 | INFO     | will attempt to kill all subprocesses of pid=847
[2026-01-09 10:00:01] 2026-01-09 08:59:15,274 | INFO     | process IDs to be killed: [847] (in reverse order)
[2026-01-09 10:00:01] 2026-01-09 08:59:15,316 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 10:00:01] 2026-01-09 08:59:15,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 10:00:01] 2026-01-09 08:59:15,319 | INFO     | did not find any defunct processes belonging to 847
[2026-01-09 10:00:01] 2026-01-09 08:59:15,320 | INFO     | did not find any defunct processes belonging to 847
[2026-01-09 10:00:01] 2026-01-09 08:59:15,320 | INFO     | ready for new job
[2026-01-09 10:00:01] 2026-01-09 08:59:15,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 10:00:01] 2026-01-09 08:59:15,323 | INFO     | ***************************************
[2026-01-09 10:00:01] 2026-01-09 08:59:15,323 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 10:00:01] 2026-01-09 08:59:15,323 | INFO     | ***************************************
[2026-01-09 10:00:01] 2026-01-09 08:59:15,323 | INFO     | 
[2026-01-09 10:00:01] 2026-01-09 08:59:15,324 | INFO     | pilot is running in a VM
[2026-01-09 10:00:01] 2026-01-09 08:59:15,324 | INFO     | architecture information:
[2026-01-09 10:00:01] 2026-01-09 08:59:15,324 | INFO     | executing command: cat /etc/os-release
[2026-01-09 10:00:01] 2026-01-09 08:59:15,341 | INFO     | cat /etc/os-release:
[2026-01-09 10:00:01] NAME="CentOS Linux"
[2026-01-09 10:00:01] VERSION="7 (Core)"
[2026-01-09 10:00:01] ID="centos"
[2026-01-09 10:00:01] ID_LIKE="rhel fedora"
[2026-01-09 10:00:01] VERSION_ID="7"
[2026-01-09 10:00:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 10:00:01] ANSI_COLOR="0;31"
[2026-01-09 10:00:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 10:00:01] HOME_URL="https://www.centos.org/"
[2026-01-09 10:00:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 10:00:01] 
[2026-01-09 10:00:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 10:00:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 10:00:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 10:00:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 10:00:01] 
[2026-01-09 10:00:01] 2026-01-09 08:59:15,341 | INFO     | ***************************************
[2026-01-09 10:00:01] 2026-01-09 08:59:15,844 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-09 10:00:01] 2026-01-09 08:59:15,862 | INFO     | sufficient remaining disk space (497539874816 B)
[2026-01-09 10:00:01] 2026-01-09 08:59:15,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 10:00:01] 2026-01-09 08:59:15,863 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 10:00:01] 2026-01-09 08:59:15,863 | INFO     | update_server=False
[2026-01-09 10:00:01] 2026-01-09 08:59:15,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 10:00:01] 2026-01-09 08:59:15,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:00:01] 2026-01-09 08:59:15,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 10:00:01] 2026-01-09 08:59:15,864 | INFO     | aborting loop
[2026-01-09 10:00:01] 2026-01-09 08:59:16,193 | INFO     | all payload control threads have been joined
[2026-01-09 10:00:01] 2026-01-09 08:59:16,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 10:00:01] 2026-01-09 08:59:16,703 | INFO     | all data control threads have been joined
[2026-01-09 10:00:01] 2026-01-09 08:59:16,790 | INFO     | all job control threads have been joined
[2026-01-09 10:00:01] 2026-01-09 08:59:16,869 | INFO     | [job] retrieve thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:16,870 | INFO     | [job] job monitor thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:16,870 | INFO     | [job] queue monitor thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:16,932 | INFO     | [payload] validate_post thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:16,994 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,104 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,198 | INFO     | [payload] control thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,283 | INFO     | [payload] failed_post thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,546 | INFO     | [job] validate thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,707 | INFO     | [data] copytool_in thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,709 | INFO     | [data] control thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,727 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:17,791 | INFO     | [job] control thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:18,334 | INFO     | [data] copytool_out thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:18,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 10:00:01] 2026-01-09 08:59:22,944 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:26,733 | INFO     | job.realtimelogging is not enabled
[2026-01-09 10:00:01] 2026-01-09 08:59:27,738 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 10:00:01] 2026-01-09 08:59:45,432 | INFO     | PID=26782 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 10:00:01] 2026-01-09 08:59:45,433 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 10:00:01] 2026-01-09 08:59:45,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 10:00:01] 2026-01-09 08:59:45,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 10:00:01] 2026-01-09 08:59:53,682 | INFO     | [monitor] cgroup control has ended
[2026-01-09 10:00:01] 2026-01-09 08:59:55,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000285878080)>', '<ExcThread(monitor, started 139999693502208)>']
[2026-01-09 10:00:01] 2026-01-09 08:59:56,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 10:00:01] 2026-01-09 08:59:56,490 | INFO     | [monitor] control thread has ended
[2026-01-09 10:00:01] 2026-01-09 09:00:00,719 | INFO     | all workflow threads have been joined
[2026-01-09 10:00:01] 2026-01-09 09:00:00,720 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 10:00:01] 2026-01-09 09:00:00,720 | INFO     | traces error code: 0
[2026-01-09 10:00:01] 2026-01-09 09:00:00,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 10:00:01] 2026-01-09 09:00:00,863 [wrapper] ==== pilot stdout END ====
[2026-01-09 10:00:01] 2026-01-09 09:00:00,869 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 10:00:01] 2026-01-09 09:00:00,875 [wrapper] pilotpid: 26782
[2026-01-09 10:00:01] 2026-01-09 09:00:00,879 [wrapper] Pilot exit status: 0
[2026-01-09 10:00:01] 2026-01-09 09:00:00,910 [wrapper] pandaids: 6963078249
[2026-01-09 10:00:01] 2026-01-09 09:00:00,948 [wrapper] cleanup supervisor_pilot  6744 26783
[2026-01-09 10:00:01] 2026-01-09 09:00:00,961 [wrapper] Test setup, not cleaning
[2026-01-09 10:00:01] 2026-01-09 09:00:00,967 [wrapper] apfmon messages muted
[2026-01-09 10:00:01] 2026-01-09 09:00:00,978 [wrapper] ==== wrapper stdout END ====
[2026-01-09 10:00:01] 2026-01-09 09:00:00,985 [wrapper] ==== wrapper stderr END ====
[2026-01-09 10:00:01]  *** Error codes and diagnostics ***
[2026-01-09 10:00:01]     "exeErrorCode": 0,
[2026-01-09 10:00:01]     "exeErrorDiag": "",
[2026-01-09 10:00:01]     "pilotErrorCode": 0,
[2026-01-09 10:00:01]     "pilotErrorDiag": "",
[2026-01-09 10:00:01]  *** Listing of results directory ***
[2026-01-09 10:00:01] total 788668
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 10:00:01] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:57 queuedata.json
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc       100 Jan  9 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 10:00:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 02:50 run_atlas
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc       105 Jan  9 02:50 job.xml
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc      6391 Jan  9 02:50 init_data.xml
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc 392712777 Jan  9 02:50 EVNT.47962006._000047.pool.root.1
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:50 start_atlas.sh
[2026-01-09 10:00:01] drwxrwx--x. 2 boinc boinc        68 Jan  9 02:50 shared
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc    592607 Jan  9 02:50 input.tar.gz
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc         0 Jan  9 02:50 boinc_lockfile
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc      2890 Jan  9 02:50 pandaJob.out
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc    989821 Jan  9 02:55 agis_schedconf.cvmfs.json
[2026-01-09 10:00:01] drwx------. 5 boinc boinc      4096 Jan  9 02:55 pilot3
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc       533 Jan  9 09:50 boinc_task_state.xml
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc 401005418 Jan  9 09:58 HITS.47962010._000386.pool.root.1
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc      1024 Jan  9 09:59 memory_monitor_summary.json
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc   1516240 Jan  9 09:59 agis_ddmendpoints.agis.ALL.json
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc   1587843 Jan  9 09:59 log.47962010._000386.job.log.tgz.1
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc      8617 Jan  9 09:59 heartbeat.json
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc        95 Jan  9 09:59 pilot_heartbeat.json
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc      8192 Jan  9 09:59 boinc_mmap_file
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc        29 Jan  9 09:59 wrapper_checkpoint.txt
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc      4881 Jan  9 10:00 pilotlog.txt
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc   3398576 Jan  9 10:00 log.47962010._000386.job.log.1
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc       353 Jan  9 10:00 output.list
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc       620 Jan  9 10:00 runtime_log
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc   5007360 Jan  9 10:00 result.tar.gz
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc      8817 Jan  9 10:00 runtime_log.err
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc       659 Jan  9 10:00 1IQKDmNo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1GfKDmYviQqn.diag
[2026-01-09 10:00:01] -rw-r--r--. 1 boinc boinc     20729 Jan  9 10:00 stderr.txt
[2026-01-09 10:00:01] HITS file was successfully produced:
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc 401005418 Jan  9 09:58 shared/HITS.pool.root.1
[2026-01-09 10:00:01]  *** Contents of shared directory: ***
[2026-01-09 10:00:01] total 780608
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc 392712777 Jan  9 02:50 ATLAS.root_0
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc     15847 Jan  9 02:50 start_atlas.sh
[2026-01-09 10:00:01] -rw-r--r--. 2 boinc boinc    592607 Jan  9 02:50 input.tar.gz
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc 401005418 Jan  9 09:58 HITS.pool.root.1
[2026-01-09 10:00:01] -rw-------. 1 boinc boinc   5007360 Jan  9 10:00 result.tar.gz
10:00:02 (23046): run_atlas exited; CPU time 155889.658414
10:00:02 (23046): called boinc_finish(0)

</stderr_txt>
]]>

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