Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:16:34 (1885245): wrapper (7.7.26015): starting
03:16:34 (1885245): wrapper: running run_atlas (--nthreads 4)
[2026-01-13 03:16:34] Arguments: --nthreads 4
[2026-01-13 03:16:34] Threads: 4
[2026-01-13 03:16:34] Checking for CVMFS
[2026-01-13 03:16:34] No cvmfs_config command found, will try listing directly
[2026-01-13 03:16:34] CVMFS is ok
[2026-01-13 03:16:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 03:16:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 03:16:34] Further information can be found at the LHC@home message board.
[2026-01-13 03:16:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 03:16:34] Checking for apptainer binary...
[2026-01-13 03:16:34] which: no apptainer in ((null))
[2026-01-13 03:16:34] apptainer is not installed, using version from CVMFS
[2026-01-13 03:16:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 03:16:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-13 03:16:34] apptainer works
[2026-01-13 03:16:34] Set ATHENA_PROC_NUMBER=4
[2026-01-13 03:16:34] Set ATHENA_CORE_NUMBER=4
[2026-01-13 03:16:34] Starting ATLAS job with PandaID=6963077761
[2026-01-13 03:16:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 12:16:03]  *** The last 200 lines of the pilot log: ***
[2026-01-13 12:16:03] 2026-01-13 11:06:42,925 | INFO     | pfn file=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6963077761/HITS.47962010._000259.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,925 | INFO     | total size of present files: 0 B (workdir size: 5032294 B)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,926 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6963077761/HITS.47962010._000259.pool.root.1 since it does not exist
[2026-01-13 12:16:03] 2026-01-13 11:06:42,938 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6963077761/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,939 | INFO     | extracted standard info from prmon json
[2026-01-13 12:16:03] 2026-01-13 11:06:42,939 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 12:16:03] 2026-01-13 11:06:42,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 12:16:03] 2026-01-13 11:06:42,949 | INFO     | fitting pss+swap vs Time
[2026-01-13 12:16:03] 2026-01-13 11:06:42,950 | INFO     | sum of square deviations: 43852059420.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,956 | INFO     | sum of deviations: 87103475569.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,957 | INFO     | mean x: 1768286496.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,957 | INFO     | mean y: 2279120.3090211134
[2026-01-13 12:16:03] 2026-01-13 11:06:42,957 | INFO     | intersect: -3510073586.5077896
[2026-01-13 12:16:03] 2026-01-13 11:06:42,958 | INFO     | chi2: 3.621598876934217
[2026-01-13 12:16:03] 2026-01-13 11:06:42,958 | INFO     | sum of square deviations: 42601598765.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,965 | INFO     | sum of deviations: 176542330556.50003
[2026-01-13 12:16:03] 2026-01-13 11:06:42,965 | INFO     | mean x: 1768286343.5
[2026-01-13 12:16:03] 2026-01-13 11:06:42,965 | INFO     | mean y: 2290004.4011627906
[2026-01-13 12:16:03] 2026-01-13 11:06:42,965 | INFO     | intersect: -7325542781.752297
[2026-01-13 12:16:03] 2026-01-13 11:06:42,966 | INFO     | chi2: 1.9674847382764487
[2026-01-13 12:16:03] 2026-01-13 11:06:42,966 | INFO     | current chi2=1.9674847382764487 (change=45.673587685061946 %)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,967 | INFO     | sum of square deviations: 41375138560.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,973 | INFO     | sum of deviations: 183990227273.99997
[2026-01-13 12:16:03] 2026-01-13 11:06:42,973 | INFO     | mean x: 1768286191.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,973 | INFO     | mean y: 2290922.8140900196
[2026-01-13 12:16:03] 2026-01-13 11:06:42,973 | INFO     | intersect: -7861063484.948544
[2026-01-13 12:16:03] 2026-01-13 11:06:42,974 | INFO     | chi2: 1.9240656193335153
[2026-01-13 12:16:03] 2026-01-13 11:06:42,974 | INFO     | current chi2=1.9240656193335153 (change=2.2068338370425833 %)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,974 | INFO     | right removable region: 510
[2026-01-13 12:16:03] 2026-01-13 11:06:42,975 | INFO     | sum of square deviations: 42601598765.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,981 | INFO     | sum of deviations: -4252778175.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,981 | INFO     | mean x: 1768286648.5
[2026-01-13 12:16:03] 2026-01-13 11:06:42,982 | INFO     | mean y: 2290223.395348837
[2026-01-13 12:16:03] 2026-01-13 11:06:42,982 | INFO     | intersect: 178812492.13383985
[2026-01-13 12:16:03] 2026-01-13 11:06:42,982 | INFO     | chi2: 1.8350406521234572
[2026-01-13 12:16:03] 2026-01-13 11:06:42,983 | INFO     | current chi2=1.8350406521234572 (change=49.330648852065316 %)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,983 | INFO     | sum of square deviations: 41375138560.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,989 | INFO     | sum of deviations: -10054719731.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,989 | INFO     | mean x: 1768286801.0
[2026-01-13 12:16:03] 2026-01-13 11:06:42,989 | INFO     | mean y: 2290943.4716242664
[2026-01-13 12:16:03] 2026-01-13 11:06:42,989 | INFO     | intersect: 432008614.6837342
[2026-01-13 12:16:03] 2026-01-13 11:06:42,990 | INFO     | chi2: 1.8307596193805478
[2026-01-13 12:16:03] 2026-01-13 11:06:42,990 | INFO     | current chi2=1.8307596193805478 (change=0.23329361875201968 %)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,990 | INFO     | left removable region: 20
[2026-01-13 12:16:03] 2026-01-13 11:06:42,991 | INFO     | sum of square deviations: 36480842142.5
[2026-01-13 12:16:03] 2026-01-13 11:06:42,997 | INFO     | sum of deviations: 88077371008.00002
[2026-01-13 12:16:03] 2026-01-13 11:06:42,997 | INFO     | mean x: 1768286770.5
[2026-01-13 12:16:03] 2026-01-13 11:06:42,997 | INFO     | mean y: 2302933.3836734695
[2026-01-13 12:16:03] 2026-01-13 11:06:42,997 | INFO     | intersect: -4266952949.6219244
[2026-01-13 12:16:03] 2026-01-13 11:06:42,998 | INFO     | chi2: 0.11258482718742491
[2026-01-13 12:16:03] 2026-01-13 11:06:42,998 | INFO     | current memory leak: 2.41 B/s (using 490 data points, chi2=0.11)
[2026-01-13 12:16:03] 2026-01-13 11:06:42,999 | INFO     | could have reported an average CPU frequency of 2646 MHz (21 samples)
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | ..............................
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . Timing measurements:
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . get job = 0 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . initial setup = 1 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . payload setup = 7 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . stage-in = 0 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . payload execution = 31760 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . stage-out = 1 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | . log creation = 0 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,000 | INFO     | ..............................
[2026-01-13 12:16:03] 2026-01-13 11:06:43,102 | INFO     | 
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | job summary report
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | --------------------------------------------------
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | PanDA job id: 6963077761
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | task id: 47962010
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | errors: (none)
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | pilot state: finished 
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | transexitcode: 0
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | exeerrorcode: 0
[2026-01-13 12:16:03] 2026-01-13 11:06:43,103 | INFO     | exeerrordiag: 
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | exitcode: 0
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | exitmsg: OK
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | cpuconsumptiontime: 125317 s
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | nevents: 450
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | neventsw: 0
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | pid: 1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | pgrp: 1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | corecount: 4
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | event service: False
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | sizes: {0: 2284630, 5: 2284892, 11: 2284948, 31770: 2324251, 31772: 2333267, 31773: 2333323, 31778: 2333725}
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | --------------------------------------------------
[2026-01-13 12:16:03] 2026-01-13 11:06:43,104 | INFO     | 
[2026-01-13 12:16:03] 2026-01-13 11:06:43,105 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-13 12:16:03] 2026-01-13 11:06:43,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,127 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 12:16:03] 2026-01-13 11:06:43,129 | INFO     | job 6963077761 has completed (purged errors)
[2026-01-13 12:16:03] 2026-01-13 11:06:43,129 | INFO     | overall cleanup function is called
[2026-01-13 12:16:03] 2026-01-13 11:06:43,468 | INFO     | number of running child processes to parent process 1896303: 1
[2026-01-13 12:16:03] 2026-01-13 11:06:43,468 | INFO     | maximum number of monitored processes: 12
[2026-01-13 12:16:03] 2026-01-13 11:06:43,468 | INFO     | aborting job monitoring since job object (job id=6963077761) has expired
[2026-01-13 12:16:03] 2026-01-13 11:06:44,144 | INFO     | --- collectZombieJob: --- 10, [1896303]
[2026-01-13 12:16:03] 2026-01-13 11:06:44,145 | INFO     | zombie collector waiting for pid 1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:44,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 12:16:03] 2026-01-13 11:06:44,145 | INFO     | collected zombie processes
[2026-01-13 12:16:03] 2026-01-13 11:06:44,145 | INFO     | will attempt to kill all subprocesses of pid=1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:44,446 | INFO     | process IDs to be killed: [1896303] (in reverse order)
[2026-01-13 12:16:03] 2026-01-13 11:06:44,552 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 12:16:03] 2026-01-13 11:06:44,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 12:16:03] 2026-01-13 11:06:44,564 | INFO     | did not find any defunct processes belonging to 1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:44,576 | INFO     | did not find any defunct processes belonging to 1896303
[2026-01-13 12:16:03] 2026-01-13 11:06:44,576 | INFO     | ready for new job
[2026-01-13 12:16:03] 2026-01-13 11:06:44,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 12:16:03] 2026-01-13 11:06:44,580 | INFO     | ***************************************
[2026-01-13 12:16:03] 2026-01-13 11:06:44,581 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 12:16:03] 2026-01-13 11:06:44,581 | INFO     | ***************************************
[2026-01-13 12:16:03] 2026-01-13 11:06:44,581 | INFO     | 
[2026-01-13 12:16:03] 2026-01-13 11:06:44,585 | INFO     | architecture information:
[2026-01-13 12:16:03] 2026-01-13 11:06:44,585 | INFO     | executing command: cat /etc/os-release
[2026-01-13 12:16:03] 2026-01-13 11:06:44,603 | INFO     | cat /etc/os-release:
[2026-01-13 12:16:03] NAME="CentOS Linux"
[2026-01-13 12:16:03] VERSION="7 (Core)"
[2026-01-13 12:16:03] ID="centos"
[2026-01-13 12:16:03] ID_LIKE="rhel fedora"
[2026-01-13 12:16:03] VERSION_ID="7"
[2026-01-13 12:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 12:16:03] ANSI_COLOR="0;31"
[2026-01-13 12:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 12:16:03] HOME_URL="https://www.centos.org/"
[2026-01-13 12:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 12:16:03] 
[2026-01-13 12:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 12:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 12:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 12:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 12:16:03] 
[2026-01-13 12:16:03] 2026-01-13 11:06:44,603 | INFO     | ***************************************
[2026-01-13 12:16:03] 2026-01-13 11:06:45,106 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-13 12:16:03] 2026-01-13 11:06:45,124 | INFO     | sufficient remaining disk space (704879001600 B)
[2026-01-13 12:16:03] 2026-01-13 11:06:45,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 12:16:03] 2026-01-13 11:06:45,124 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 12:16:03] 2026-01-13 11:06:45,124 | INFO     | update_server=False
[2026-01-13 12:16:03] 2026-01-13 11:06:45,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 12:16:03] 2026-01-13 11:06:45,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:16:03] 2026-01-13 11:06:45,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 12:16:03] 2026-01-13 11:06:45,125 | INFO     | aborting loop
[2026-01-13 12:16:03] 2026-01-13 11:06:45,596 | INFO     | all payload control threads have been joined
[2026-01-13 12:16:03] 2026-01-13 11:06:45,886 | INFO     | all data control threads have been joined
[2026-01-13 12:16:03] 2026-01-13 11:06:46,017 | INFO     | all job control threads have been joined
[2026-01-13 12:16:03] 2026-01-13 11:06:46,130 | INFO     | [job] retrieve thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,131 | INFO     | [job] job monitor thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,267 | INFO     | [data] copytool_in thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,416 | INFO     | [payload] failed_post thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,602 | INFO     | [payload] control thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,634 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,778 | INFO     | [job] validate thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,873 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:46,890 | INFO     | [data] control thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:47,023 | INFO     | [job] control thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:47,131 | INFO     | [data] copytool_out thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:47,479 | INFO     | [payload] validate_post thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:47,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:47,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 12:16:03] 2026-01-13 11:06:48,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 12:16:03] 2026-01-13 11:06:49,118 | INFO     | [job] queue monitor thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:06:51,892 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 12:16:03] 2026-01-13 11:07:16,188 | INFO     | PID=1889352 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 12:16:03] 2026-01-13 11:07:16,188 | INFO     | .. there are 3 such processes running
[2026-01-13 12:16:03] 2026-01-13 11:07:16,189 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 12:16:03] 2026-01-13 11:07:16,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 12:16:03] 2026-01-13 11:07:16,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 12:16:03] 2026-01-13 11:07:36,338 | INFO     | [monitor] cgroup control has ended
[2026-01-13 12:16:03] 2026-01-13 11:07:37,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22495212513088)>', '<ExcThread(monitor, started 22494975067904)>']
[2026-01-13 12:16:03] 2026-01-13 11:07:38,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 12:16:03] 2026-01-13 11:07:38,288 | INFO     | [monitor] control thread has ended
[2026-01-13 12:16:03] 2026-01-13 11:07:42,369 | INFO     | all workflow threads have been joined
[2026-01-13 12:16:03] 2026-01-13 11:07:42,369 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 12:16:03] 2026-01-13 11:07:42,369 | INFO     | traces error code: 0
[2026-01-13 12:16:03] 2026-01-13 11:07:42,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 12:16:03] 2026-01-13 11:07:42,544 [wrapper] ==== pilot stdout END ====
[2026-01-13 12:16:03] 2026-01-13 11:07:42,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 12:16:03] 2026-01-13 11:07:42,550 [wrapper] pilotpid: 1889352
[2026-01-13 12:16:03] 2026-01-13 11:07:42,553 [wrapper] Pilot exit status: 0
[2026-01-13 12:16:03] 2026-01-13 11:07:42,563 [wrapper] pandaids: 6963077761
[2026-01-13 12:16:03] 2026-01-13 11:07:42,639 [wrapper] cleanup supervisor_pilot 2380487 1889353
[2026-01-13 12:16:03] 2026-01-13 11:07:42,642 [wrapper] Test setup, not cleaning
[2026-01-13 12:16:03] 2026-01-13 11:07:42,645 [wrapper] apfmon messages muted
[2026-01-13 12:16:03] 2026-01-13 11:07:42,648 [wrapper] ==== wrapper stdout END ====
[2026-01-13 12:16:03] 2026-01-13 11:07:42,651 [wrapper] ==== wrapper stderr END ====
[2026-01-13 12:16:03]  *** Error codes and diagnostics ***
[2026-01-13 12:16:03]     "exeErrorCode": 0,
[2026-01-13 12:16:03]     "exeErrorDiag": "",
[2026-01-13 12:16:03]     "pilotErrorCode": 0,
[2026-01-13 12:16:03]     "pilotErrorDiag": "",
[2026-01-13 12:16:03]  *** Listing of results directory ***
[2026-01-13 12:16:03] total 792144
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc      5112 Jan  8 12:56 queuedata.json
[2026-01-13 12:16:03] -rwx------ 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc       100 Jan 13 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 12:16:03] -rwxr-xr-x 1 boinc boinc      7986 Jan 13 02:28 run_atlas
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc       105 Jan 13 02:28 job.xml
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc 392998403 Jan 13 03:16 EVNT.47962006._000042.pool.root.1
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc      6637 Jan 13 03:16 init_data.xml
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc     15847 Jan 13 03:16 start_atlas.sh
[2026-01-13 12:16:03] drwxrwx--x 2 boinc boinc      4096 Jan 13 03:16 shared
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc    592611 Jan 13 03:16 input.tar.gz
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc         0 Jan 13 03:16 boinc_lockfile
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc      2890 Jan 13 03:16 pandaJob.out
[2026-01-13 12:16:03] -rw------- 1 boinc boinc    987763 Jan 13 03:16 agis_schedconf.cvmfs.json
[2026-01-13 12:16:03] drwx------ 5 boinc boinc      4096 Jan 13 03:16 pilot3
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc       531 Jan 13 11:59 boinc_task_state.xml
[2026-01-13 12:16:03] -rw------- 1 boinc boinc 402827648 Jan 13 12:06 HITS.47962010._000259.pool.root.1
[2026-01-13 12:16:03] -rw------- 1 boinc boinc      1034 Jan 13 12:06 memory_monitor_summary.json
[2026-01-13 12:16:03] -rw------- 1 boinc boinc   1516240 Jan 13 12:06 agis_ddmendpoints.agis.ALL.json
[2026-01-13 12:16:03] -rw------- 1 boinc boinc   1230376 Jan 13 12:06 log.47962010._000259.job.log.tgz.1
[2026-01-13 12:16:03] -rw------- 1 boinc boinc      8616 Jan 13 12:06 heartbeat.json
[2026-01-13 12:16:03] -rw------- 1 boinc boinc        95 Jan 13 12:07 pilot_heartbeat.json
[2026-01-13 12:16:03] -rw------- 1 boinc boinc      4833 Jan 13 12:07 pilotlog.txt
[2026-01-13 12:16:03] -rw------- 1 boinc boinc   4475284 Jan 13 12:07 log.47962010._000259.job.log.1
[2026-01-13 12:16:03] -rw------- 1 boinc boinc       353 Jan 13 12:07 output.list
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc       620 Jan 13 12:07 runtime_log
[2026-01-13 12:16:03] -rw------- 1 boinc boinc   5724160 Jan 13 12:07 result.tar.gz
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc      9206 Jan 13 12:07 runtime_log.err
[2026-01-13 12:16:03] -rw------- 1 boinc boinc       668 Jan 13 12:07 NWYMDmBo3x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOUkKDmlLHgbn.diag
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc        28 Jan 13 12:16 wrapper_checkpoint.txt
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc      8192 Jan 13 12:16 boinc_mmap_file
[2026-01-13 12:16:03] -rw-r--r-- 1 boinc boinc     21113 Jan 13 12:16 stderr.txt
[2026-01-13 12:16:03] HITS file was successfully produced:
[2026-01-13 12:16:03] -rw------- 1 boinc boinc 402827648 Jan 13 12:06 shared/HITS.pool.root.1
[2026-01-13 12:16:03]  *** Contents of shared directory: ***
[2026-01-13 12:16:03] total 783372
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc 392998403 Jan 13 03:16 ATLAS.root_0
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc     15847 Jan 13 03:16 start_atlas.sh
[2026-01-13 12:16:03] -rw-r--r-- 2 boinc boinc    592611 Jan 13 03:16 input.tar.gz
[2026-01-13 12:16:03] -rw------- 1 boinc boinc 402827648 Jan 13 12:06 HITS.pool.root.1
[2026-01-13 12:16:03] -rw------- 1 boinc boinc   5724160 Jan 13 12:07 result.tar.gz
12:16:05 (1885245): run_atlas exited; CPU time 126433.607237
12:16:05 (1885245): called boinc_finish(0)

</stderr_txt>
]]>

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