Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:32 (21545): wrapper (7.7.26015): starting
22:43:32 (21545): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 22:43:32] Arguments: --nthreads 8
[2026-01-08 22:43:32] Threads: 8
[2026-01-08 22:43:32] Checking for CVMFS
[2026-01-08 22:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 22:43:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 22:43:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 22:43:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 22:43:35] 2.11.2.0 15680 34529 100360 154920 3 60 17332909 25165825 96 130560 0 15586990 99.798 11084791 3117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 22:43:35] CVMFS is ok
[2026-01-08 22:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 22:43:35] Checking for apptainer binary...
[2026-01-08 22:43:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 22:43:35] Running /usr/bin/apptainer --version
[2026-01-08 22:43:36] apptainer version 1.3.2-1.el7
[2026-01-08 22:43:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 22:43:41] cg-vwn486.simple-grid.lan
[2026-01-08 22:43:41] apptainer works
[2026-01-08 22:43:41] Set ATHENA_PROC_NUMBER=8
[2026-01-08 22:43:41] Set ATHENA_CORE_NUMBER=8
[2026-01-08 22:43:41] Starting ATLAS job with PandaID=6963077815
[2026-01-08 22:43:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:21:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:21:16] 2026-01-09 07:20:32,535 | INFO     | right removable region: 547
[2026-01-09 08:21:16] 2026-01-09 07:20:32,536 | INFO     | sum of square deviations: 51026257963.64062
[2026-01-09 08:21:16] 2026-01-09 07:20:32,544 | INFO     | sum of deviations: 985600676341.3942
[2026-01-09 08:21:16] 2026-01-09 07:20:32,545 | INFO     | mean x: 1767926487.187956
[2026-01-09 08:21:16] 2026-01-09 07:20:32,545 | INFO     | mean y: 2661090.666058394
[2026-01-09 08:21:16] 2026-01-09 07:20:32,545 | INFO     | intersect: -34145826590.63584
[2026-01-09 08:21:16] 2026-01-09 07:20:32,546 | INFO     | chi2: 16.010900421170764
[2026-01-09 08:21:16] 2026-01-09 07:20:32,546 | INFO     | current chi2=16.010900421170764 (change=26.58804215623796 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,547 | INFO     | sum of square deviations: 49642061211.252235
[2026-01-09 08:21:16] 2026-01-09 07:20:32,555 | INFO     | sum of deviations: 780314149258.2551
[2026-01-09 08:21:16] 2026-01-09 07:20:32,555 | INFO     | mean x: 1767926639.6942909
[2026-01-09 08:21:16] 2026-01-09 07:20:32,555 | INFO     | mean y: 2683705.405156538
[2026-01-09 08:21:16] 2026-01-09 07:20:32,555 | INFO     | intersect: -27787019988.271446
[2026-01-09 08:21:16] 2026-01-09 07:20:32,556 | INFO     | chi2: 11.310792434020563
[2026-01-09 08:21:16] 2026-01-09 07:20:32,556 | INFO     | current chi2=11.310792434020563 (change=29.35567559295653 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,557 | INFO     | sum of square deviations: 48283120746.31961
[2026-01-09 08:21:16] 2026-01-09 07:20:32,565 | INFO     | sum of deviations: 591617962337.6025
[2026-01-09 08:21:16] 2026-01-09 07:20:32,565 | INFO     | mean x: 1767926792.2007434
[2026-01-09 08:21:16] 2026-01-09 07:20:32,565 | INFO     | mean y: 2704877.4944237918
[2026-01-09 08:21:16] 2026-01-09 07:20:32,566 | INFO     | intersect: -21659880932.96367
[2026-01-09 08:21:16] 2026-01-09 07:20:32,566 | INFO     | chi2: 7.5319252255251605
[2026-01-09 08:21:16] 2026-01-09 07:20:32,566 | INFO     | current chi2=7.5319252255251605 (change=33.40939399727059 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,567 | INFO     | sum of square deviations: 46949204006.341354
[2026-01-09 08:21:16] 2026-01-09 07:20:32,576 | INFO     | sum of deviations: 415214087737.561
[2026-01-09 08:21:16] 2026-01-09 07:20:32,576 | INFO     | mean x: 1767926944.707317
[2026-01-09 08:21:16] 2026-01-09 07:20:32,576 | INFO     | mean y: 2725055.343339587
[2026-01-09 08:21:16] 2026-01-09 07:20:32,576 | INFO     | intersect: -15632644895.426275
[2026-01-09 08:21:16] 2026-01-09 07:20:32,577 | INFO     | chi2: 4.332903118135332
[2026-01-09 08:21:16] 2026-01-09 07:20:32,577 | INFO     | current chi2=4.332903118135332 (change=42.47283412411703 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,578 | INFO     | sum of square deviations: 45640110698.24249
[2026-01-09 08:21:16] 2026-01-09 07:20:32,586 | INFO     | sum of deviations: 290913450294.2125
[2026-01-09 08:21:16] 2026-01-09 07:20:32,586 | INFO     | mean x: 1767927097.2121212
[2026-01-09 08:21:16] 2026-01-09 07:20:32,586 | INFO     | mean y: 2739505.2481060605
[2026-01-09 08:21:16] 2026-01-09 07:20:32,586 | INFO     | intersect: -11266158923.133993
[2026-01-09 08:21:16] 2026-01-09 07:20:32,587 | INFO     | chi2: 2.5893758706649908
[2026-01-09 08:21:16] 2026-01-09 07:20:32,587 | INFO     | current chi2=2.5893758706649908 (change=40.23923914136971 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,588 | INFO     | sum of square deviations: 44355705067.824
[2026-01-09 08:21:16] 2026-01-09 07:20:32,596 | INFO     | sum of deviations: 262242869095.1069
[2026-01-09 08:21:16] 2026-01-09 07:20:32,596 | INFO     | mean x: 1767927249.709369
[2026-01-09 08:21:16] 2026-01-09 07:20:32,596 | INFO     | mean y: 2742908.263862333
[2026-01-09 08:21:16] 2026-01-09 07:20:32,596 | INFO     | intersect: -10449718925.141302
[2026-01-09 08:21:16] 2026-01-09 07:20:32,597 | INFO     | chi2: 2.5499079038377315
[2026-01-09 08:21:16] 2026-01-09 07:20:32,597 | INFO     | current chi2=2.5499079038377315 (change=1.5242270260718584 %)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,597 | INFO     | left removable region: 60
[2026-01-09 08:21:16] 2026-01-09 07:20:32,598 | INFO     | sum of square deviations: 35811970154.22988
[2026-01-09 08:21:16] 2026-01-09 07:20:32,605 | INFO     | sum of deviations: 339795387076.88324
[2026-01-09 08:21:16] 2026-01-09 07:20:32,605 | INFO     | mean x: 1767927981.7002053
[2026-01-09 08:21:16] 2026-01-09 07:20:32,605 | INFO     | mean y: 2770279.1704312116
[2026-01-09 08:21:16] 2026-01-09 07:20:32,605 | INFO     | intersect: -16771893898.162447
[2026-01-09 08:21:16] 2026-01-09 07:20:32,606 | INFO     | chi2: 0.021915799864798448
[2026-01-09 08:21:16] 2026-01-09 07:20:32,606 | INFO     | current memory leak: 9.49 B/s (using 487 data points, chi2=0.02)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | could have reported an average CPU frequency of 2249 MHz (21 samples)
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | ..............................
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | . Timing measurements:
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | . get job = 0 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | . initial setup = 12 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,607 | INFO     | . payload setup = 199 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,608 | INFO     | . stage-in = 0 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,608 | INFO     | . payload execution = 33904 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,608 | INFO     | . stage-out = 2 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,608 | INFO     | . log creation = 0 s
[2026-01-09 08:21:16] 2026-01-09 07:20:32,608 | INFO     | ..............................
[2026-01-09 08:21:16] 2026-01-09 07:20:33,118 | INFO     | 
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | job summary report
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | --------------------------------------------------
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | PanDA job id: 6963077815
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | task id: 47962010
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | errors: (none)
[2026-01-09 08:21:16] 2026-01-09 07:20:33,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | pilot state: finished 
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | transexitcode: 0
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | exeerrorcode: 0
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | exeerrordiag: 
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | exitcode: 0
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | exitmsg: OK
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | cpuconsumptiontime: 162220 s
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | nevents: 450
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | neventsw: 0
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | pid: 31762
[2026-01-09 08:21:16] 2026-01-09 07:20:33,120 | INFO     | pgrp: 31762
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | corecount: 8
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | event service: False
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | sizes: {0: 2283791, 1: 2284477, 2: 2284676, 13: 2284676, 23: 2284732, 34: 2284760, 45: 2284916, 56: 2284944, 66: 2284972, 77: 2285000, 88: 2285056, 98: 2285364, 10
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | --------------------------------------------------
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | 
[2026-01-09 08:21:16] 2026-01-09 07:20:33,121 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2026-01-09 08:21:16] 2026-01-09 07:20:33,144 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,144 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,147 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:21:16] 2026-01-09 07:20:33,147 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,147 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:21:16] 2026-01-09 07:20:33,147 | INFO     | job 6963077815 has completed (purged errors)
[2026-01-09 08:21:16] 2026-01-09 07:20:33,147 | INFO     | overall cleanup function is called
[2026-01-09 08:21:16] 2026-01-09 07:20:34,163 | INFO     | --- collectZombieJob: --- 10, [31762]
[2026-01-09 08:21:16] 2026-01-09 07:20:34,163 | INFO     | zombie collector waiting for pid 31762
[2026-01-09 08:21:16] 2026-01-09 07:20:34,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:21:16] 2026-01-09 07:20:34,163 | INFO     | collected zombie processes
[2026-01-09 08:21:16] 2026-01-09 07:20:34,163 | INFO     | will attempt to kill all subprocesses of pid=31762
[2026-01-09 08:21:16] 2026-01-09 07:20:34,221 | INFO     | process IDs to be killed: [31762] (in reverse order)
[2026-01-09 08:21:16] 2026-01-09 07:20:34,264 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:21:16] 2026-01-09 07:20:34,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:21:16] 2026-01-09 07:20:34,266 | INFO     | did not find any defunct processes belonging to 31762
[2026-01-09 08:21:16] 2026-01-09 07:20:34,268 | INFO     | did not find any defunct processes belonging to 31762
[2026-01-09 08:21:16] 2026-01-09 07:20:34,268 | INFO     | ready for new job
[2026-01-09 08:21:16] 2026-01-09 07:20:34,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:21:16] 2026-01-09 07:20:34,271 | INFO     | ***************************************
[2026-01-09 08:21:16] 2026-01-09 07:20:34,271 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:21:16] 2026-01-09 07:20:34,271 | INFO     | ***************************************
[2026-01-09 08:21:16] 2026-01-09 07:20:34,271 | INFO     | 
[2026-01-09 08:21:16] 2026-01-09 07:20:34,272 | INFO     | pilot is running in a VM
[2026-01-09 08:21:16] 2026-01-09 07:20:34,272 | INFO     | architecture information:
[2026-01-09 08:21:16] 2026-01-09 07:20:34,273 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:21:16] 2026-01-09 07:20:34,290 | INFO     | cat /etc/os-release:
[2026-01-09 08:21:16] NAME="CentOS Linux"
[2026-01-09 08:21:16] VERSION="7 (Core)"
[2026-01-09 08:21:16] ID="centos"
[2026-01-09 08:21:16] ID_LIKE="rhel fedora"
[2026-01-09 08:21:16] VERSION_ID="7"
[2026-01-09 08:21:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:21:16] ANSI_COLOR="0;31"
[2026-01-09 08:21:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:21:16] HOME_URL="https://www.centos.org/"
[2026-01-09 08:21:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:21:16] 
[2026-01-09 08:21:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:21:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:21:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:21:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:21:16] 
[2026-01-09 08:21:16] 2026-01-09 07:20:34,291 | INFO     | ***************************************
[2026-01-09 08:21:16] 2026-01-09 07:20:34,794 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2026-01-09 08:21:16] 2026-01-09 07:20:34,816 | INFO     | sufficient remaining disk space (497759027200 B)
[2026-01-09 08:21:16] 2026-01-09 07:20:34,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:21:16] 2026-01-09 07:20:34,817 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:21:16] 2026-01-09 07:20:34,817 | INFO     | update_server=False
[2026-01-09 08:21:16] 2026-01-09 07:20:34,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:21:16] 2026-01-09 07:20:34,848 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 08:21:16] 2026-01-09 07:20:34,848 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 08:21:16] 2026-01-09 07:20:34,848 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:21:16] 2026-01-09 07:20:34,848 | INFO     | will abort loop
[2026-01-09 08:21:16] 2026-01-09 07:20:34,861 | INFO     | all job control threads have been joined
[2026-01-09 08:21:16] 2026-01-09 07:20:35,047 | INFO     | all data control threads have been joined
[2026-01-09 08:21:16] 2026-01-09 07:20:35,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:21:16] 2026-01-09 07:20:35,558 | INFO     | all payload control threads have been joined
[2026-01-09 08:21:16] 2026-01-09 07:20:35,823 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:35,854 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:35,867 | INFO     | [job] control thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,001 | INFO     | [job] validate thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,053 | INFO     | [data] control thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,130 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,145 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,211 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:21:16] 2026-01-09 07:20:36,306 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,500 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:36,564 | INFO     | [payload] control thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:37,308 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:37,467 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:37,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:21:16] 2026-01-09 07:20:38,737 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:40,230 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:20:45,255 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:21:16] 2026-01-09 07:20:46,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:21:16] 2026-01-09 07:21:05,140 | INFO     | PID=25281 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 08:21:16] 2026-01-09 07:21:05,141 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:21:16] 2026-01-09 07:21:05,141 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:21:16] 2026-01-09 07:21:05,141 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:21:16] 2026-01-09 07:21:11,011 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:21:16] 2026-01-09 07:21:11,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464085382976)>', '<ExcThread(monitor, started 140463633831680)>']
[2026-01-09 08:21:16] 2026-01-09 07:21:12,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:21:16] 2026-01-09 07:21:12,175 | INFO     | [monitor] control thread has ended
[2026-01-09 08:21:16] 2026-01-09 07:21:16,562 | INFO     | all workflow threads have been joined
[2026-01-09 08:21:16] 2026-01-09 07:21:16,563 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:21:16] 2026-01-09 07:21:16,563 | INFO     | traces error code: 0
[2026-01-09 08:21:16] 2026-01-09 07:21:16,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:21:16] 2026-01-09 07:21:16,704 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:21:16] 2026-01-09 07:21:16,709 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:21:16] 2026-01-09 07:21:16,712 [wrapper] pilotpid: 25281
[2026-01-09 08:21:16] 2026-01-09 07:21:16,716 [wrapper] Pilot exit status: 0
[2026-01-09 08:21:16] 2026-01-09 07:21:16,734 [wrapper] pandaids: 6963077815
[2026-01-09 08:21:16] 2026-01-09 07:21:16,780 [wrapper] cleanup supervisor_pilot 18432 25282
[2026-01-09 08:21:16] 2026-01-09 07:21:16,787 [wrapper] Test setup, not cleaning
[2026-01-09 08:21:16] 2026-01-09 07:21:16,791 [wrapper] apfmon messages muted
[2026-01-09 08:21:16] 2026-01-09 07:21:16,794 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:21:16] 2026-01-09 07:21:16,799 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:21:16]  *** Error codes and diagnostics ***
[2026-01-09 08:21:16]     "exeErrorCode": 0,
[2026-01-09 08:21:16]     "exeErrorDiag": "",
[2026-01-09 08:21:16]     "pilotErrorCode": 0,
[2026-01-09 08:21:16]     "pilotErrorDiag": "",
[2026-01-09 08:21:16]  *** Listing of results directory ***
[2026-01-09 08:21:16] total 794084
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 08:21:16] -rwx------. 1 boinc boinc     36322 Jan  8 12:56 runpilot2-wrapper.sh
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:56 queuedata.json
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc       100 Jan  8 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:21:16] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 22:43 run_atlas
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc       105 Jan  8 22:43 job.xml
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc      6389 Jan  8 22:43 init_data.xml
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc 393092130 Jan  8 22:43 EVNT.47962006._000044.pool.root.1
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc     15847 Jan  8 22:43 start_atlas.sh
[2026-01-09 08:21:16] drwxrwx--x. 2 boinc boinc        68 Jan  8 22:43 shared
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc    592609 Jan  8 22:43 input.tar.gz
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc         0 Jan  8 22:43 boinc_lockfile
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc      2890 Jan  8 22:43 pandaJob.out
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc    989845 Jan  8 22:48 agis_schedconf.cvmfs.json
[2026-01-09 08:21:16] drwx------. 5 boinc boinc      4096 Jan  8 22:48 pilot3
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc       533 Jan  9 08:12 boinc_task_state.xml
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc 403529152 Jan  9 08:19 HITS.47962010._000313.pool.root.1
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc      1022 Jan  9 08:20 memory_monitor_summary.json
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc   1516240 Jan  9 08:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc   1704166 Jan  9 08:20 log.47962010._000313.job.log.tgz.1
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc      8618 Jan  9 08:20 heartbeat.json
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc      8192 Jan  9 08:21 boinc_mmap_file
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc        29 Jan  9 08:21 wrapper_checkpoint.txt
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc        95 Jan  9 08:21 pilot_heartbeat.json
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc      5068 Jan  9 08:21 pilotlog.txt
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc   4607817 Jan  9 08:21 log.47962010._000313.job.log.1
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc       353 Jan  9 08:21 output.list
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc       620 Jan  9 08:21 runtime_log
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc   6328320 Jan  9 08:21 result.tar.gz
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc      8833 Jan  9 08:21 runtime_log.err
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc       660 Jan  9 08:21 omrNDmAo3x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtFfKDmRQekMo.diag
[2026-01-09 08:21:16] -rw-r--r--. 1 boinc boinc     20767 Jan  9 08:21 stderr.txt
[2026-01-09 08:21:16] HITS file was successfully produced:
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc 403529152 Jan  9 08:19 shared/HITS.pool.root.1
[2026-01-09 08:21:16]  *** Contents of shared directory: ***
[2026-01-09 08:21:16] total 784728
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc 393092130 Jan  8 22:43 ATLAS.root_0
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc     15847 Jan  8 22:43 start_atlas.sh
[2026-01-09 08:21:16] -rw-r--r--. 2 boinc boinc    592609 Jan  8 22:43 input.tar.gz
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc 403529152 Jan  9 08:19 HITS.pool.root.1
[2026-01-09 08:21:16] -rw-------. 1 boinc boinc   6328320 Jan  9 08:21 result.tar.gz
08:21:18 (21545): run_atlas exited; CPU time 162353.175945
08:21:18 (21545): called boinc_finish(0)

</stderr_txt>
]]>

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