Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:42:13 (41194): wrapper (7.7.26015): starting
16:42:13 (41194): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 16:42:13] Arguments: --nthreads 12
[2026-01-08 16:42:13] Threads: 12
[2026-01-08 16:42:13] Checking for CVMFS
[2026-01-08 16:42:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 16:42:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 16:42:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 16:42:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 16:42:21] 2.13.3.0 41404 0 25484 154912 3 1 3818043 4096000 0 130560 0 0 0.000 1335 319 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 16:42:21] CVMFS is ok
[2026-01-08 16:42:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 16:42:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 16:42:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 16:42:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 16:42:21] Further information can be found at the LHC@home message board.
[2026-01-08 16:42:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 16:42:21] Checking for apptainer binary...
[2026-01-08 16:42:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 16:42:21] Running /usr/bin/apptainer --version
[2026-01-08 16:42:21] apptainer version 1.4.5
[2026-01-08 16:42:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 16:42:22] perseverance
[2026-01-08 16:42:22] apptainer works
[2026-01-08 16:42:22] Set ATHENA_PROC_NUMBER=12
[2026-01-08 16:42:22] Set ATHENA_CORE_NUMBER=12
[2026-01-08 16:42:22] Starting ATLAS job with PandaID=6962919575
[2026-01-08 16:42:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:26:13 (3327): wrapper (7.7.26015): starting
17:26:13 (3327): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 17:26:13] Arguments: --nthreads 12
[2026-01-08 17:26:13] Threads: 12
[2026-01-08 17:26:13] This job has been restarted, cleaning up previous attempt
[2026-01-08 17:26:13] Checking for CVMFS
[2026-01-08 17:26:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:26:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:26:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:26:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:26:19] 2.13.3.0 3550 0 25524 154914 3 1 3824731 4096001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 17:26:19] CVMFS is ok
[2026-01-08 17:26:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 17:26:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 17:26:19] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 17:26:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 17:26:19] Further information can be found at the LHC@home message board.
[2026-01-08 17:26:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:26:19] Checking for apptainer binary...
[2026-01-08 17:26:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:26:19] Running /usr/bin/apptainer --version
[2026-01-08 17:26:19] apptainer version 1.4.5
[2026-01-08 17:26:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:26:19] perseverance
[2026-01-08 17:26:19] apptainer works
[2026-01-08 17:26:19] Set ATHENA_PROC_NUMBER=12
[2026-01-08 17:26:19] Set ATHENA_CORE_NUMBER=12
[2026-01-08 17:26:19] Starting ATLAS job with PandaID=6962919575
[2026-01-08 17:26:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:31:27 (3325): wrapper (7.7.26015): starting
17:31:27 (3325): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 17:31:27] Arguments: --nthreads 12
[2026-01-08 17:31:27] Threads: 12
[2026-01-08 17:31:27] This job has been restarted, cleaning up previous attempt
[2026-01-08 17:31:27] Checking for CVMFS
[2026-01-08 17:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 17:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 17:31:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 17:31:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 17:31:31] 2.13.3.0 3547 0 25504 154914 3 1 3828318 4096001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-08 17:31:31] CVMFS is ok
[2026-01-08 17:31:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 17:31:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 17:31:31] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-08 17:31:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-08 17:31:31] Further information can be found at the LHC@home message board.
[2026-01-08 17:31:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 17:31:31] Checking for apptainer binary...
[2026-01-08 17:31:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 17:31:31] Running /usr/bin/apptainer --version
[2026-01-08 17:31:31] apptainer version 1.4.5
[2026-01-08 17:31:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 17:31:32] perseverance
[2026-01-08 17:31:32] apptainer works
[2026-01-08 17:31:32] Set ATHENA_PROC_NUMBER=12
[2026-01-08 17:31:32] Set ATHENA_CORE_NUMBER=12
[2026-01-08 17:31:32] Starting ATLAS job with PandaID=6962919575
[2026-01-08 17:31:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 18:42:56]  *** The last 200 lines of the pilot log: ***
[2026-01-08 18:42:56]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6962919575/log.47898826._021365.job.log.tgz.1
[2026-01-08 18:42:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/0d/log.47898826._021365.job.log.tgz.1
[2026-01-08 18:42:56]  workdir=None
[2026-01-08 18:42:56] ]
[2026-01-08 18:42:56] 2026-01-08 17:41:43,157 | INFO     | transferring file log.47898826._021365.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6962919575/log.47898826._021365.job.log.tgz.1 to /var/lib/boin
[2026-01-08 18:42:56] 2026-01-08 17:41:43,157 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6962919575/log.47898826._021365.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4789
[2026-01-08 18:42:56] 2026-01-08 17:41:43,166 | INFO     | adding to output.list: log.47898826._021365.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/0d/log.47898826._021365.job.log.tg
[2026-01-08 18:42:56] 2026-01-08 17:41:43,167 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-08 18:42:56] 2026-01-08 17:41:43,167 | INFO     | summary of transferred files:
[2026-01-08 18:42:56] 2026-01-08 17:41:43,167 | INFO     |  -- lfn=log.47898826._021365.job.log.tgz.1, status_code=0, status=transferred
[2026-01-08 18:42:56] 2026-01-08 17:41:43,167 | INFO     | stage-out finished correctly
[2026-01-08 18:42:56] 2026-01-08 17:41:43,405 | INFO     | time since job start (4201s) is within the limit (174528.0s)
[2026-01-08 18:42:56] 2026-01-08 17:41:44,009 | INFO     | monitor loop #317: job 0:6962919575 is in state 'finished'
[2026-01-08 18:42:56] 2026-01-08 17:41:44,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:42:56] 2026-01-08 17:41:45,411 | INFO     | time since job start (4203s) is within the limit (174528.0s)
[2026-01-08 18:42:56] 2026-01-08 17:41:45,629 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-08 18:42:56] 2026-01-08 17:41:46,348 | INFO     | job 6962919575 has state=finished
[2026-01-08 18:42:56] 2026-01-08 17:41:46,348 | INFO     | preparing for final server update for job 6962919575 in state='finished'
[2026-01-08 18:42:56] 2026-01-08 17:41:46,513 | INFO     | monitor loop #318: job 0:6962919575 is in state 'finished'
[2026-01-08 18:42:56] 2026-01-08 17:41:46,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | this job has now completed (state=finished)
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | log transfer has been attempted: DONE
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | job 6962919575 has finished - writing final server update
[2026-01-08 18:42:56] 2026-01-08 17:41:47,401 | INFO     | total number of processed events: 400 (read)
[2026-01-08 18:42:56] 2026-01-08 17:41:47,402 | INFO     | executing command: lscpu
[2026-01-08 18:42:56] 2026-01-08 17:41:47,414 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 18:42:56] 2026-01-08 17:41:47,416 | INFO     | time since job start (4205s) is within the limit (174528.0s)
[2026-01-08 18:42:56] 2026-01-08 17:41:48,462 | INFO     | PID=7655 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 18:42:56] 2026-01-08 17:41:49,015 | INFO     | monitor loop #319: job 0:6962919575 is in state 'finished'
[2026-01-08 18:42:56] 2026-01-08 17:41:49,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:42:56] 2026-01-08 17:41:49,463 | INFO     | time since job start (4207s) is within the limit (174528.0s)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,468 | INFO     | time since job start (4209s) is within the limit (174528.0s)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,517 | INFO     | monitor loop #320: job 0:6962919575 is in state 'finished'
[2026-01-08 18:42:56] 2026-01-08 17:41:51,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,896 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 18:42:56] 2026-01-08 17:41:51,897 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3729.0970833333336
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6962919575/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | INFO     | extracted standard info from prmon json
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 18:42:56] 2026-01-08 17:41:51,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | fitting pss+swap vs Time
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | sum of square deviations: 73882315.5
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | sum of deviations: -4434783478.5
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | mean x: 1767892087.5
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | mean y: 2855651.3387096776
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | intersect: 106120518157.67795
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | chi2: 0.12121561609519955
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | current memory leak: -60.02 B/s (using 62 data points, chi2=0.12)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | could have reported an average CPU frequency of 4215 MHz (6 samples)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,899 | INFO     | ..............................
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . Timing measurements:
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . get job = 0 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . initial setup = 0 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . payload setup = 3 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . stage-in = 0 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . payload execution = 4178 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . stage-out = 0 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | . log creation = 0 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,900 | INFO     | ..............................
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | 
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | job summary report
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | --------------------------------------------------
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | PanDA job id: 6962919575
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | task id: 47898826
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | errors: (none)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | pilot state: finished 
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | transexitcode: 0
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | exeerrorcode: 0
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | exeerrordiag: 
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | exitcode: 0
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | exitmsg: OK
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | cpuconsumptiontime: 37385 s
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | nevents: 400
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | neventsw: 0
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | pid: 14117
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | pgrp: 14117
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | corecount: 12
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | event service: False
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | sizes: {0: 2283977, 1: 2283977, 3: 2284267, 11: 2284295, 4186: 2310374, 4187: 2319571, 4190: 2319571, 4196: 2319765}
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | --------------------------------------------------
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | 
[2026-01-08 18:42:56] 2026-01-08 17:41:51,928 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,937 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 18:42:56] 2026-01-08 17:41:51,938 | INFO     | job 6962919575 has completed (purged errors)
[2026-01-08 18:42:56] 2026-01-08 17:41:51,938 | INFO     | overall cleanup function is called
[2026-01-08 18:42:56] 2026-01-08 17:41:52,944 | INFO     | --- collectZombieJob: --- 10, [14117]
[2026-01-08 18:42:56] 2026-01-08 17:41:52,944 | INFO     | zombie collector waiting for pid 14117
[2026-01-08 18:42:56] 2026-01-08 17:41:52,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 18:42:56] 2026-01-08 17:41:52,945 | INFO     | collected zombie processes
[2026-01-08 18:42:56] 2026-01-08 17:41:52,945 | INFO     | will attempt to kill all subprocesses of pid=14117
[2026-01-08 18:42:56] 2026-01-08 17:41:52,979 | INFO     | process IDs to be killed: [14117] (in reverse order)
[2026-01-08 18:42:56] 2026-01-08 17:41:52,998 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 18:42:56] 2026-01-08 17:41:52,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 18:42:56] 2026-01-08 17:41:52,999 | INFO     | did not find any defunct processes belonging to 14117
[2026-01-08 18:42:56] 2026-01-08 17:41:53,000 | INFO     | did not find any defunct processes belonging to 14117
[2026-01-08 18:42:56] 2026-01-08 17:41:53,000 | INFO     | ready for new job
[2026-01-08 18:42:56] 2026-01-08 17:41:53,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | ***************************************
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | ***************************************
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | 
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | architecture information:
[2026-01-08 18:42:56] 2026-01-08 17:41:53,001 | INFO     | executing command: cat /etc/os-release
[2026-01-08 18:42:56] 2026-01-08 17:41:53,007 | INFO     | cat /etc/os-release:
[2026-01-08 18:42:56] NAME="CentOS Linux"
[2026-01-08 18:42:56] VERSION="7 (Core)"
[2026-01-08 18:42:56] ID="centos"
[2026-01-08 18:42:56] ID_LIKE="rhel fedora"
[2026-01-08 18:42:56] VERSION_ID="7"
[2026-01-08 18:42:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 18:42:56] ANSI_COLOR="0;31"
[2026-01-08 18:42:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 18:42:56] HOME_URL="https://www.centos.org/"
[2026-01-08 18:42:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 18:42:56] 
[2026-01-08 18:42:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 18:42:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 18:42:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 18:42:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 18:42:56] 
[2026-01-08 18:42:56] 2026-01-08 17:41:53,007 | INFO     | ***************************************
[2026-01-08 18:42:56] 2026-01-08 17:41:53,510 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | INFO     | sufficient remaining disk space (122996916224 B)
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | INFO     | update_server=False
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 18:42:56] 2026-01-08 17:41:53,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:42:56] 2026-01-08 17:41:53,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 18:42:56] 2026-01-08 17:41:53,749 | INFO     | all payload control threads have been joined
[2026-01-08 18:42:56] 2026-01-08 17:41:54,018 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 18:42:56] 2026-01-08 17:41:54,018 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 18:42:56] 2026-01-08 17:41:54,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 18:42:56] 2026-01-08 17:41:54,018 | INFO     | will abort loop
[2026-01-08 18:42:56] 2026-01-08 17:41:54,328 | INFO     | all data control threads have been joined
[2026-01-08 18:42:56] 2026-01-08 17:41:54,524 | INFO     | [job] queue monitor thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,525 | INFO     | [job] retrieve thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,544 | INFO     | [data] copytool_in thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,548 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,549 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,755 | INFO     | [payload] control thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:54,864 | INFO     | [payload] validate_post thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,024 | INFO     | [job] job monitor thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,052 | INFO     | all job control threads have been joined
[2026-01-08 18:42:56] 2026-01-08 17:41:55,242 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,334 | INFO     | [data] control thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,547 | INFO     | [job] validate thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,714 | INFO     | [data] copytool_out thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:55,781 | INFO     | [payload] failed_post thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:56,058 | INFO     | [job] control thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:41:56,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 18:42:56] 2026-01-08 17:42:00,172 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:42:04,455 | INFO     | job.realtimelogging is not enabled
[2026-01-08 18:42:56] 2026-01-08 17:42:05,463 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 18:42:56] 2026-01-08 17:42:25,094 | INFO     | PID=7655 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 18:42:56] 2026-01-08 17:42:25,097 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 18:42:56] 2026-01-08 17:42:25,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 18:42:56] 2026-01-08 17:42:25,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 18:42:56] 2026-01-08 17:42:48,419 | INFO     | [monitor] cgroup control has ended
[2026-01-08 18:42:56] 2026-01-08 17:42:49,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138358779254592)>', '<ExcThread(monitor, started 138357942253312)>']
[2026-01-08 18:42:56] 2026-01-08 17:42:50,226 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 18:42:56] 2026-01-08 17:42:50,228 | INFO     | [monitor] control thread has ended
[2026-01-08 18:42:56] 2026-01-08 17:42:54,475 | INFO     | all workflow threads have been joined
[2026-01-08 18:42:56] 2026-01-08 17:42:54,478 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 18:42:56] 2026-01-08 17:42:54,480 | INFO     | traces error code: 0
[2026-01-08 18:42:56] 2026-01-08 17:42:54,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 18:42:56] 2026-01-08 17:42:55,406 [wrapper] ==== pilot stdout END ====
[2026-01-08 18:42:56] 2026-01-08 17:42:55,425 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 18:42:56] 2026-01-08 17:42:55,446 [wrapper] pilotpid: 7655
[2026-01-08 18:42:56] 2026-01-08 17:42:55,458 [wrapper] Pilot exit status: 0
[2026-01-08 18:42:56] 2026-01-08 17:42:55,520 [wrapper] pandaids: 6962919575 6962919575 6962919575
[2026-01-08 18:42:56] 2026-01-08 17:42:55,644 [wrapper] cleanup supervisor_pilot   23382 7656
[2026-01-08 18:42:56] 2026-01-08 17:42:55,657 [wrapper] Test setup, not cleaning
[2026-01-08 18:42:56] 2026-01-08 17:42:55,674 [wrapper] apfmon messages muted
[2026-01-08 18:42:56] 2026-01-08 17:42:55,693 [wrapper] ==== wrapper stdout END ====
[2026-01-08 18:42:56] 2026-01-08 17:42:55,705 [wrapper] ==== wrapper stderr END ====
[2026-01-08 18:42:56]  *** Error codes and diagnostics ***
[2026-01-08 18:42:56]     "exeErrorCode": 0,
[2026-01-08 18:42:56]     "exeErrorDiag": "",
[2026-01-08 18:42:56]     "pilotErrorCode": 0,
[2026-01-08 18:42:56]     "pilotErrorDiag": "",
[2026-01-08 18:42:56]  *** Listing of results directory ***
[2026-01-08 18:42:56] total 661768
[2026-01-08 18:42:56] drwx------ 5 boinc boinc      4096 dic  3 15:30 pilot3
[2026-01-08 18:42:56] -rwx------ 1 boinc boinc     36322 ene  8 09:07 runpilot2-wrapper.sh
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc      5112 ene  8 09:11 queuedata.json
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc    579449 ene  8 09:11 pilot3.tar.gz
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc       100 ene  8 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 18:42:56] -rwxr-xr-x 1 boinc boinc      7986 ene  8 16:42 run_atlas
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc       105 ene  8 16:42 job.xml
[2026-01-08 18:42:56] -rw-r--r-- 3 boinc boinc 224359242 ene  8 16:42 EVNT.47898824._000337.pool.root.1
[2026-01-08 18:42:56] -rw-r--r-- 3 boinc boinc 224359242 ene  8 16:42 ATLAS.root_0
[2026-01-08 18:42:56] drwxrwx--x 2 boinc boinc      4096 ene  8 16:42 shared
[2026-01-08 18:42:56] -rw-r--r-- 2 boinc boinc    592395 ene  8 16:42 input.tar.gz
[2026-01-08 18:42:56] -rw-r--r-- 2 boinc boinc     15847 ene  8 16:42 start_atlas.sh
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc         0 ene  8 16:42 boinc_setup_complete
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc         0 ene  8 16:42 boinc_lockfile
[2026-01-08 18:42:56] -rw------- 1 boinc boinc   1516240 ene  8 16:43 agis_ddmendpoints.agis.ALL.json
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc      2519 ene  8 17:31 pandaJob.out
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc      8980 ene  8 17:31 init_data.xml
[2026-01-08 18:42:56] -rw------- 1 boinc boinc    989837 ene  8 17:31 agis_schedconf.cvmfs.json
[2026-01-08 18:42:56] -rw------- 1 boinc boinc 222989132 ene  8 18:40 HITS.47898826._021365.pool.root.1
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc       529 ene  8 18:41 boinc_task_state.xml
[2026-01-08 18:42:56] -rw------- 1 boinc boinc        96 ene  8 18:41 pilot_heartbeat.json
[2026-01-08 18:42:56] -rw------- 1 boinc boinc      1035 ene  8 18:41 memory_monitor_summary.json
[2026-01-08 18:42:56] -rw------- 1 boinc boinc    382407 ene  8 18:41 log.47898826._021365.job.log.tgz.1
[2026-01-08 18:42:56] -rw------- 1 boinc boinc      7787 ene  8 18:41 heartbeat.json
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc      8192 ene  8 18:42 boinc_mmap_file
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc        27 ene  8 18:42 wrapper_checkpoint.txt
[2026-01-08 18:42:56] -rw------- 1 boinc boinc      5012 ene  8 18:42 pilotlog.txt
[2026-01-08 18:42:56] -rw------- 1 boinc boinc    623982 ene  8 18:42 log.47898826._021365.job.log.1
[2026-01-08 18:42:56] -rw------- 1 boinc boinc       357 ene  8 18:42 output.list
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc       620 ene  8 18:42 runtime_log
[2026-01-08 18:42:56] -rw------- 1 boinc boinc   1024000 ene  8 18:42 result.tar.gz
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc      9018 ene  8 18:42 runtime_log.err
[2026-01-08 18:42:56] -rw------- 1 boinc boinc       910 ene  8 18:42 8D3LDmLE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLtjKDm2nBQvn.diag
[2026-01-08 18:42:56] -rw-r--r-- 1 boinc boinc     27223 ene  8 18:42 stderr.txt
[2026-01-08 18:42:56] HITS file was successfully produced:
[2026-01-08 18:42:56] -rw------- 1 boinc boinc 222989132 ene  8 18:40 shared/HITS.pool.root.1
[2026-01-08 18:42:56]  *** Contents of shared directory: ***
[2026-01-08 18:42:56] total 438472
[2026-01-08 18:42:56] -rw-r--r-- 3 boinc boinc 224359242 ene  8 16:42 ATLAS.root_0
[2026-01-08 18:42:56] -rw-r--r-- 2 boinc boinc    592395 ene  8 16:42 input.tar.gz
[2026-01-08 18:42:56] -rw-r--r-- 2 boinc boinc     15847 ene  8 16:42 start_atlas.sh
[2026-01-08 18:42:56] -rw------- 1 boinc boinc 222989132 ene  8 18:40 HITS.pool.root.1
[2026-01-08 18:42:56] -rw------- 1 boinc boinc   1024000 ene  8 18:42 result.tar.gz
18:42:58 (3325): run_atlas exited; CPU time 37269.295355
18:42:58 (3325): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN