Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-13 03:49:22 (9148): vboxwrapper version 26210
2026-01-13 03:49:22 (9148): BOINC client version: 8.2.8
2026-01-13 03:49:23 (9148): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-01-13 03:49:23 (9148): Successfully copied 'init_data.xml' to the shared directory.
2026-01-13 03:49:23 (9148): Create VM. (boinc_3429c085e5776904, slot#2)
2026-01-13 03:49:24 (9148): Setting Memory Size for VM. (4400MB)
2026-01-13 03:49:24 (9148): Setting CPU Count for VM. (4)
2026-01-13 03:49:24 (9148): Setting Chipset Options for VM.
2026-01-13 03:49:25 (9148): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-13 03:49:25 (9148): Setting Boot Options for VM.
2026-01-13 03:49:25 (9148): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-13 03:49:26 (9148): Enabling VM Network Access.
2026-01-13 03:49:26 (9148): Disabling USB Support for VM.
2026-01-13 03:49:26 (9148): Disabling COM Port Support for VM.
2026-01-13 03:49:26 (9148): Disabling LPT Port Support for VM.
2026-01-13 03:49:27 (9148): Disabling Audio Support for VM.
2026-01-13 03:49:27 (9148): Disabling Clipboard Support for VM.
2026-01-13 03:49:27 (9148): Disabling Drag and Drop Support for VM.
2026-01-13 03:49:27 (9148): Adding storage controller(s) to VM.
2026-01-13 03:49:28 (9148): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-13 03:49:28 (9148): Adding VirtualBox Guest Additions to VM.
2026-01-13 03:49:29 (9148): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-13 03:49:29 (9148): forwarding host port 60751 to guest port 80
2026-01-13 03:49:29 (9148): Enabling remote desktop for VM.
2026-01-13 03:49:30 (9148): Enabling shared directory for VM.
2026-01-13 03:49:30 (9148): Starting VM using VBoxManage interface. (boinc_3429c085e5776904, slot#2)
2026-01-13 03:49:36 (9148): Successfully started VM. (PID = '7456')
2026-01-13 03:49:36 (9148): Reporting VM Process ID to BOINC.
2026-01-13 03:49:36 (9148): Guest Log: BIOS: VirtualBox 7.2.2
2026-01-13 03:49:36 (9148): Guest Log: CPUID EDX: 0x178bfbff
2026-01-13 03:49:36 (9148): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-13 03:49:36 (9148): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-13 03:49:36 (9148): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-13 03:49:36 (9148): Detected: Web Application Enabled (http://localhost:60751)
2026-01-13 03:49:36 (9148): Detected: Remote Desktop Enabled (localhost:60752)
2026-01-13 03:49:36 (9148): Preference change detected
2026-01-13 03:49:36 (9148): Setting CPU throttle for VM. (100%)
2026-01-13 03:49:37 (9148): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-13 03:49:38 (9148): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-13 03:49:38 (9148): Guest Log: BIOS: Booting from Hard Disk...
2026-01-13 03:49:41 (9148): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-13 03:49:41 (9148): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-13 03:49:41 (9148): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-13 03:49:49 (9148): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-13 03:49:49 (9148): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-13 03:49:59 (9148): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000143 main     Log opened 2026-01-13T03:49:58.013386000Z
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000245 main     OS Product: Linux
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000278 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000305 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000331 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000332 main     Process ID: 1305
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.000333 main     Package type: LINUX_64BITS_GENERIC
2026-01-13 03:49:59 (9148): Guest Log: 00:00:00.001100 main     5.2.32 r132073 started. Verbose level = 0
2026-01-13 03:50:00 (9148): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-13 03:50:00 (9148): Guest Log: [INFO] Mounting shared directory
2026-01-13 03:50:00 (9148): Guest Log: [INFO] Checking for init_data.xml
2026-01-13 03:50:07 (9148): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-13 03:50:07 (9148): Guest Log: [INFO] Detected branch: prod
2026-01-13 03:50:07 (9148): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-13 03:50:07 (9148): Guest Log: Copying input files
2026-01-13 03:50:08 (9148): Guest Log: Copied input files into RunAtlas.
2026-01-13 03:50:08 (9148): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-13 03:50:08 (9148): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-13 03:50:08 (9148): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-13 03:50:08 (9148): Guest Log: Further information can be found at the LHC@home message board.
2026-01-13 03:50:09 (9148): Guest Log: 00:00:10.005767 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 394 416 000ns (GuestNow=1 768 269 009 621 284 000 ns GuestLast=1 768 276 198 015 700 000 ns fSetTimeLastLoop=true )
2026-01-13 03:50:21 (9148): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-13 03:50:22 (9148): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-13 03:50:22 (9148): Guest Log: 2.6.3.0 1601 0 29964 155072 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-13 03:50:24 (9148): Guest Log: copied the webapp to /var/www
2026-01-13 03:50:24 (9148): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-13 03:50:24 (9148): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-13 03:50:25 (9148): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-13 03:50:25 (9148): Guest Log:  *** Starting ATLAS job. (PandaID=6962919592 taskID=47898826) ***
2026-01-13 05:33:32 (9148): Status Report: Elapsed Time: '6000.494413'
2026-01-13 05:33:32 (9148): Status Report: CPU Time: '21198.687500'
2026-01-13 07:17:00 (9148): Status Report: Elapsed Time: '12001.074986'
2026-01-13 07:17:00 (9148): Status Report: CPU Time: '45782.875000'
2026-01-13 08:26:13 (9148): Guest Log:  *** Job finished ***
2026-01-13 08:26:13 (9148): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:25:58,017 | INFO     | all workflow threads have been joined
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:25:58,017 | INFO     | end of generic workflow (traces error code: 0)
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:25:58,018 | INFO     | traces error code: 0
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:25:58,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,754 | INFO     | PID=6011 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,755 | INFO     | found 0 job(s) in 20 queues
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,755 | INFO     | [monitor] control thread has ended
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,867 [wrapper] ==== pilot stdout END ====
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,871 [wrapper] ==== wrapper stdout RESUME ====
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,875 [wrapper] pilotpid: 6011
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:09,880 [wrapper] Pilot exit status: 0
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,852 [wrapper] pandaids: 6962919592
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,914 [wrapper] cleanup supervisor_pilot 17458 6012
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,920 [wrapper] Test setup, not cleaning
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,924 [wrapper] apfmon messages muted
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,929 [wrapper] ==== wrapper stdout END ====
2026-01-13 08:26:13 (9148): Guest Log: 2026-01-13 06:26:10,933 [wrapper] ==== wrapper stderr END ====
2026-01-13 08:26:13 (9148): Guest Log:  *** Error codes and diagnostics ***
2026-01-13 08:26:13 (9148): Guest Log:     "exeErrorCode": 0,
2026-01-13 08:26:13 (9148): Guest Log:     "exeErrorDiag": "",
2026-01-13 08:26:13 (9148): Guest Log:     "pilotErrorCode": 0,
2026-01-13 08:26:13 (9148): Guest Log:     "pilotErrorDiag": "",
2026-01-13 08:26:13 (9148): Guest Log:  *** Listing of results directory ***
2026-01-13 08:26:13 (9148): Guest Log: total 221532
2026-01-13 08:26:13 (9148): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 08:07 runpilot2-wrapper.sh
2026-01-13 08:26:13 (9148): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 08:11 queuedata.json
2026-01-13 08:26:13 (9148): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 08:11 pilot3.tar.gz
2026-01-13 08:26:13 (9148): Guest Log: -rwxr-xr-x. 1 atlas atlas      8457 Jan 13 01:50 init_data.xml
2026-01-13 08:26:13 (9148): Guest Log: -rwxr-xr-x. 1 atlas atlas    592405 Jan 13 01:50 input.tar.gz
2026-01-13 08:26:13 (9148): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 13 01:50 start_atlas.sh
2026-01-13 08:26:13 (9148): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 13 01:50 EVNT.47898824._000338.pool.root.1 -> /data/./ATLAS.root_0
2026-01-13 08:26:13 (9148): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 13 01:50 pandaJob.out
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas    987763 Jan 13 01:53 agis_schedconf.cvmfs.json
2026-01-13 08:26:13 (9148): Guest Log: drwx------. 5 atlas atlas      4096 Jan 13 01:53 pilot3
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas 217865743 Jan 13 06:24 HITS.47898826._021382.pool.root.1
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas      1030 Jan 13 06:25 memory_monitor_summary.json
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas        95 Jan 13 06:25 pilot_heartbeat.json
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 13 06:25 agis_ddmendpoints.agis.ALL.json
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas    414939 Jan 13 06:25 log.47898826._021382.job.log.tgz.1
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas      7822 Jan 13 06:25 heartbeat.json
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas       744 Jan 13 06:26 pilotlog.txt
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas   2157554 Jan 13 06:26 log.47898826._021382.job.log.1
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas       357 Jan 13 06:26 output.list
2026-01-13 08:26:13 (9148): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 13 06:26 runtime_log
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas   2590720 Jan 13 06:26 result.tar.gz
2026-01-13 08:26:13 (9148): Guest Log: -rw-r--r--. 1 atlas atlas      8738 Jan 13 06:26 runtime_log.err
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas       654 Jan 13 06:26 HXPMDmLE0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbtjKDm7KW10m.diag
2026-01-13 08:26:13 (9148): Guest Log: Looking for outputfile HITS.47898826._021382.pool.root.1
2026-01-13 08:26:13 (9148): Guest Log: HITS file was successfully produced
2026-01-13 08:26:13 (9148): Guest Log: -rw-------. 1 atlas atlas 217865743 Jan 13 06:24 /home/atlas/RunAtlas/HITS.47898826._021382.pool.root.1
2026-01-13 08:26:15 (9148): Guest Log: Successfully finished the ATLAS job!
2026-01-13 08:26:15 (9148): Guest Log: Copying the results back to the shared directory!
2026-01-13 08:26:15 (9148): Guest Log:  *** Contents of shared directory: ***
2026-01-13 08:26:15 (9148): Guest Log: total 436940
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root 226342484 Jan 13 01:49 ATLAS.root_0
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root 217865743 Jan 13 06:26 HITS.pool.root.1
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root      8457 Jan 13 01:49 init_data.xml
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root    592405 Jan  8 15:54 input.tar.gz
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root   2590720 Jan 13 06:26 result.tar.gz
2026-01-13 08:26:15 (9148): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  8 15:54 start_atlas.sh
2026-01-13 08:26:15 (9148): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-13 08:26:15 (9148): VM Completion File Detected.
2026-01-13 08:26:15 (9148): Powering off VM.
2026-01-13 08:26:15 (9148): Successfully stopped VM.
2026-01-13 08:26:15 (9148): Deregistering VM. (boinc_3429c085e5776904, slot#2)
2026-01-13 08:26:15 (9148): Removing network bandwidth throttle group from VM.
2026-01-13 08:26:16 (9148): Removing VM from VirtualBox.
2026-01-13 08:26:21 (9148): called boinc_finish(0)

</stderr_txt>
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