Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:15:54 (3936356): wrapper (7.7.26015): starting
08:15:54 (3936356): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 08:15:54] Arguments: --nthreads 4
[2026-01-11 08:15:54] Threads: 4
[2026-01-11 08:15:54] Checking for CVMFS
[2026-01-11 08:15:54] No cvmfs_config command found, will try listing directly
[2026-01-11 08:15:54] CVMFS is ok
[2026-01-11 08:15:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 08:15:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 08:15:54] Further information can be found at the LHC@home message board.
[2026-01-11 08:15:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 08:15:54] Checking for apptainer binary...
[2026-01-11 08:15:54] which: no apptainer in ((null))
[2026-01-11 08:15:54] apptainer is not installed, using version from CVMFS
[2026-01-11 08:15:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 08:15:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-11 08:15:54] apptainer works
[2026-01-11 08:15:54] Set ATHENA_PROC_NUMBER=4
[2026-01-11 08:15:54] Set ATHENA_CORE_NUMBER=4
[2026-01-11 08:15:54] Starting ATLAS job with PandaID=6962922540
[2026-01-11 08:15:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 12:28:28]  *** The last 200 lines of the pilot log: ***
[2026-01-11 12:28:28] 2026-01-11 11:15:23,921 | INFO     | executing command: lscpu
[2026-01-11 12:28:28] 2026-01-11 11:15:23,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 12:28:28] 2026-01-11 11:15:24,935 | INFO     | time since job start (14358s) is within the limit (174528.0s)
[2026-01-11 12:28:28] 2026-01-11 11:15:25,585 | INFO     | monitor loop #1040: job 0:6962922540 is in state 'finished'
[2026-01-11 12:28:28] 2026-01-11 11:15:25,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:28:28] 2026-01-11 11:15:26,942 | INFO     | time since job start (14360s) is within the limit (174528.0s)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,087 | INFO     | monitor loop #1041: job 0:6962922540 is in state 'finished'
[2026-01-11 12:28:28] 2026-01-11 11:15:28,088 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,416 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 12:28:28] 2026-01-11 11:15:28,427 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2564.4292656250004
[2026-01-11 12:28:28] 2026-01-11 11:15:28,441 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962922540/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,442 | INFO     | extracted standard info from prmon json
[2026-01-11 12:28:28] 2026-01-11 11:15:28,442 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 12:28:28] 2026-01-11 11:15:28,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 12:28:28] 2026-01-11 11:15:28,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 12:28:28] 2026-01-11 11:15:28,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 12:28:28] 2026-01-11 11:15:28,448 | INFO     | fitting pss+swap vs Time
[2026-01-11 12:28:28] 2026-01-11 11:15:28,448 | INFO     | sum of square deviations: 4024149870.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,450 | INFO     | sum of deviations: -18334693688.99999
[2026-01-11 12:28:28] 2026-01-11 11:15:28,450 | INFO     | mean x: 1768122933.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,450 | INFO     | mean y: 2365998.2893617023
[2026-01-11 12:28:28] 2026-01-11 11:15:28,450 | INFO     | intersect: 8058227094.002293
[2026-01-11 12:28:28] 2026-01-11 11:15:28,451 | INFO     | chi2: 1.3352534142222012
[2026-01-11 12:28:28] 2026-01-11 11:15:28,451 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 12:28:28] 2026-01-11 11:15:28,453 | INFO     | sum of deviations: -17629093116.499996
[2026-01-11 12:28:28] 2026-01-11 11:15:28,453 | INFO     | mean x: 1768122780.5
[2026-01-11 12:28:28] 2026-01-11 11:15:28,453 | INFO     | mean y: 2366426.3
[2026-01-11 12:28:28] 2026-01-11 11:15:28,453 | INFO     | intersect: 8264432601.045076
[2026-01-11 12:28:28] 2026-01-11 11:15:28,454 | INFO     | chi2: 1.3345238074912613
[2026-01-11 12:28:28] 2026-01-11 11:15:28,454 | INFO     | current chi2=1.3345238074912613 (change=0.05464181728866178 %)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,454 | INFO     | right removable region: 229
[2026-01-11 12:28:28] 2026-01-11 11:15:28,454 | INFO     | sum of square deviations: 3772712597.5
[2026-01-11 12:28:28] 2026-01-11 11:15:28,456 | INFO     | sum of deviations: -43184660189.00001
[2026-01-11 12:28:28] 2026-01-11 11:15:28,456 | INFO     | mean x: 1768123085.5
[2026-01-11 12:28:28] 2026-01-11 11:15:28,456 | INFO     | mean y: 2380853.652173913
[2026-01-11 12:28:28] 2026-01-11 11:15:28,456 | INFO     | intersect: 20241344900.434086
[2026-01-11 12:28:28] 2026-01-11 11:15:28,457 | INFO     | chi2: 0.11543325187908983
[2026-01-11 12:28:28] 2026-01-11 11:15:28,457 | INFO     | current chi2=0.11543325187908983 (change=91.35495549761758 %)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,457 | INFO     | sum of square deviations: 3531973200.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,459 | INFO     | sum of deviations: -35620287296.00001
[2026-01-11 12:28:28] 2026-01-11 11:15:28,459 | INFO     | mean x: 1768123238.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,459 | INFO     | mean y: 2376050.8933333335
[2026-01-11 12:28:28] 2026-01-11 11:15:28,459 | INFO     | intersect: 17834067897.335938
[2026-01-11 12:28:28] 2026-01-11 11:15:28,460 | INFO     | chi2: 0.09604446127576076
[2026-01-11 12:28:28] 2026-01-11 11:15:28,460 | INFO     | current chi2=0.09604446127576076 (change=16.79653850836481 %)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,460 | INFO     | left removable region: 20
[2026-01-11 12:28:28] 2026-01-11 11:15:28,460 | INFO     | sum of square deviations: 2830787960.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,462 | INFO     | sum of deviations: -22497448857.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,462 | INFO     | mean x: 1768123360.0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,462 | INFO     | mean y: 2368384.4449760765
[2026-01-11 12:28:28] 2026-01-11 11:15:28,462 | INFO     | intersect: 14054379847.877583
[2026-01-11 12:28:28] 2026-01-11 11:15:28,463 | INFO     | chi2: 0.059782626316856435
[2026-01-11 12:28:28] 2026-01-11 11:15:28,463 | INFO     | current memory leak: -7.95 B/s (using 209 data points, chi2=0.06)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | could have reported an average CPU frequency of 2522 MHz (11 samples)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | ..............................
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . Timing measurements:
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . get job = 0 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . initial setup = 1 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . payload setup = 7 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . stage-in = 0 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,464 | INFO     | . payload execution = 14322 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,465 | INFO     | . stage-out = 1 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,465 | INFO     | . log creation = 0 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,465 | INFO     | ..............................
[2026-01-11 12:28:28] 2026-01-11 11:15:28,570 | INFO     | 
[2026-01-11 12:28:28] 2026-01-11 11:15:28,570 | INFO     | job summary report
[2026-01-11 12:28:28] 2026-01-11 11:15:28,570 | INFO     | --------------------------------------------------
[2026-01-11 12:28:28] 2026-01-11 11:15:28,570 | INFO     | PanDA job id: 6962922540
[2026-01-11 12:28:28] 2026-01-11 11:15:28,570 | INFO     | task id: 47898826
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | errors: (none)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | pilot state: finished 
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | transexitcode: 0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | exeerrorcode: 0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | exeerrordiag: 
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | exitcode: 0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | exitmsg: OK
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | cpuconsumptiontime: 55036 s
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | nevents: 400
[2026-01-11 12:28:28] 2026-01-11 11:15:28,571 | INFO     | neventsw: 0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | pid: 3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | pgrp: 3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | corecount: 4
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | event service: False
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | sizes: {0: 2283860, 1: 2284002, 6: 2284264, 11: 2284292, 14333: 2314865, 14335: 2324137, 14337: 2324321, 14345: 2324515}
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | --------------------------------------------------
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | 
[2026-01-11 12:28:28] 2026-01-11 11:15:28,572 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 12:28:28] 2026-01-11 11:15:28,590 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | job 6962922540 has completed (purged errors)
[2026-01-11 12:28:28] 2026-01-11 11:15:28,592 | INFO     | overall cleanup function is called
[2026-01-11 12:28:28] 2026-01-11 11:15:29,600 | INFO     | --- collectZombieJob: --- 10, [3947523]
[2026-01-11 12:28:28] 2026-01-11 11:15:29,600 | INFO     | zombie collector waiting for pid 3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:29,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 12:28:28] 2026-01-11 11:15:29,601 | INFO     | collected zombie processes
[2026-01-11 12:28:28] 2026-01-11 11:15:29,601 | INFO     | will attempt to kill all subprocesses of pid=3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:29,935 | INFO     | process IDs to be killed: [3947523] (in reverse order)
[2026-01-11 12:28:28] 2026-01-11 11:15:30,042 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 12:28:28] 2026-01-11 11:15:30,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 12:28:28] 2026-01-11 11:15:30,055 | INFO     | did not find any defunct processes belonging to 3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:30,066 | INFO     | did not find any defunct processes belonging to 3947523
[2026-01-11 12:28:28] 2026-01-11 11:15:30,067 | INFO     | ready for new job
[2026-01-11 12:28:28] 2026-01-11 11:15:30,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 12:28:28] 2026-01-11 11:15:30,069 | INFO     | ***************************************
[2026-01-11 12:28:28] 2026-01-11 11:15:30,070 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 12:28:28] 2026-01-11 11:15:30,070 | INFO     | ***************************************
[2026-01-11 12:28:28] 2026-01-11 11:15:30,070 | INFO     | 
[2026-01-11 12:28:28] 2026-01-11 11:15:30,074 | INFO     | architecture information:
[2026-01-11 12:28:28] 2026-01-11 11:15:30,074 | INFO     | executing command: cat /etc/os-release
[2026-01-11 12:28:28] 2026-01-11 11:15:30,090 | INFO     | cat /etc/os-release:
[2026-01-11 12:28:28] NAME="CentOS Linux"
[2026-01-11 12:28:28] VERSION="7 (Core)"
[2026-01-11 12:28:28] ID="centos"
[2026-01-11 12:28:28] ID_LIKE="rhel fedora"
[2026-01-11 12:28:28] VERSION_ID="7"
[2026-01-11 12:28:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 12:28:28] ANSI_COLOR="0;31"
[2026-01-11 12:28:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 12:28:28] HOME_URL="https://www.centos.org/"
[2026-01-11 12:28:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 12:28:28] 
[2026-01-11 12:28:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 12:28:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 12:28:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 12:28:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 12:28:28] 
[2026-01-11 12:28:28] 2026-01-11 11:15:30,091 | INFO     | ***************************************
[2026-01-11 12:28:28] 2026-01-11 11:15:30,594 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 12:28:28] 2026-01-11 11:15:30,610 | INFO     | sufficient remaining disk space (700970958848 B)
[2026-01-11 12:28:28] 2026-01-11 11:15:30,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 12:28:28] 2026-01-11 11:15:30,611 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 12:28:28] 2026-01-11 11:15:30,611 | INFO     | update_server=False
[2026-01-11 12:28:28] 2026-01-11 11:15:30,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 12:28:28] 2026-01-11 11:15:30,713 | INFO     | all data control threads have been joined
[2026-01-11 12:28:28] 2026-01-11 11:15:31,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 12:28:28] 2026-01-11 11:15:31,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 12:28:28] 2026-01-11 11:15:31,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:28:28] 2026-01-11 11:15:31,595 | INFO     | aborting loop
[2026-01-11 12:28:28] 2026-01-11 11:15:31,616 | INFO     | [job] retrieve thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:31,718 | INFO     | [data] control thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,006 | INFO     | all payload control threads have been joined
[2026-01-11 12:28:28] 2026-01-11 11:15:32,086 | INFO     | [job] validate thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,107 | INFO     | all job control threads have been joined
[2026-01-11 12:28:28] 2026-01-11 11:15:32,154 | INFO     | [data] copytool_in thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,186 | INFO     | [payload] validate_post thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,474 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,601 | INFO     | [job] job monitor thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,674 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,766 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,781 | INFO     | [payload] failed_post thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:32,838 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:33,012 | INFO     | [payload] control thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:33,112 | INFO     | [job] control thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:33,431 | INFO     | [data] copytool_out thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:33,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:28:28] 2026-01-11 11:15:34,582 | INFO     | [job] queue monitor thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:15:35,436 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 12:28:28] 2026-01-11 11:16:00,545 | INFO     | PID=3940183 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 12:28:28] 2026-01-11 11:16:00,545 | INFO     | .. there are 4 such processes running
[2026-01-11 12:28:28] 2026-01-11 11:16:00,546 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 12:28:28] 2026-01-11 11:16:00,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 12:28:28] 2026-01-11 11:16:00,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 12:28:28] 2026-01-11 11:16:04,206 [wrapper] supervise_pilot (15 min periods counter: 17)
[2026-01-11 12:28:28] 2026-01-11 11:16:28,927 | INFO     | [monitor] cgroup control has ended
[2026-01-11 12:28:28] 2026-01-11 11:16:29,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22773873575744)>', '<ExcThread(monitor, started 22773629933312)>']
[2026-01-11 12:28:28] 2026-01-11 11:16:30,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 12:28:28] 2026-01-11 11:16:30,696 | INFO     | [monitor] control thread has ended
[2026-01-11 12:28:28] 2026-01-11 11:16:34,959 | INFO     | all workflow threads have been joined
[2026-01-11 12:28:28] 2026-01-11 11:16:34,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 12:28:28] 2026-01-11 11:16:34,960 | INFO     | traces error code: 0
[2026-01-11 12:28:28] 2026-01-11 11:16:34,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 12:28:28] 2026-01-11 11:16:35,166 [wrapper] ==== pilot stdout END ====
[2026-01-11 12:28:28] 2026-01-11 11:16:35,169 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 12:28:28] 2026-01-11 11:16:35,172 [wrapper] pilotpid: 3940183
[2026-01-11 12:28:28] 2026-01-11 11:16:35,176 [wrapper] Pilot exit status: 0
[2026-01-11 12:28:28] 2026-01-11 11:16:35,187 [wrapper] pandaids: 6962922540
[2026-01-11 12:28:28] 2026-01-11 11:16:35,266 [wrapper] cleanup supervisor_pilot 4183508 3940184
[2026-01-11 12:28:28] 2026-01-11 11:16:35,269 [wrapper] Test setup, not cleaning
[2026-01-11 12:28:28] 2026-01-11 11:16:35,272 [wrapper] apfmon messages muted
[2026-01-11 12:28:28] 2026-01-11 11:16:35,275 [wrapper] ==== wrapper stdout END ====
[2026-01-11 12:28:28] 2026-01-11 11:16:35,278 [wrapper] ==== wrapper stderr END ====
[2026-01-11 12:28:28]  *** Error codes and diagnostics ***
[2026-01-11 12:28:28]     "exeErrorCode": 0,
[2026-01-11 12:28:28]     "exeErrorDiag": "",
[2026-01-11 12:28:28]     "pilotErrorCode": 0,
[2026-01-11 12:28:28]     "pilotErrorDiag": "",
[2026-01-11 12:28:28]  *** Listing of results directory ***
[2026-01-11 12:28:28] total 443008
[2026-01-11 12:28:28] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:10 pilot3.tar.gz
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:10 queuedata.json
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc       100 Jan 11 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 12:28:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 08:15 run_atlas
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc       105 Jan 11 08:15 job.xml
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc 226507190 Jan 11 08:15 EVNT.47898824._000845.pool.root.1
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc      6636 Jan 11 08:15 init_data.xml
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc    592400 Jan 11 08:15 input.tar.gz
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc     15847 Jan 11 08:15 start_atlas.sh
[2026-01-11 12:28:28] drwxrwx--x 2 boinc boinc      4096 Jan 11 08:15 shared
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc         0 Jan 11 08:15 boinc_lockfile
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc      2516 Jan 11 08:15 pandaJob.out
[2026-01-11 12:28:28] -rw------- 1 boinc boinc    989548 Jan 11 08:16 agis_schedconf.cvmfs.json
[2026-01-11 12:28:28] drwx------ 5 boinc boinc      4096 Jan 11 08:16 pilot3
[2026-01-11 12:28:28] -rw------- 1 boinc boinc 218385984 Jan 11 12:14 HITS.47898826._021975.pool.root.1
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc       528 Jan 11 12:14 boinc_task_state.xml
[2026-01-11 12:28:28] -rw------- 1 boinc boinc      1037 Jan 11 12:15 memory_monitor_summary.json
[2026-01-11 12:28:28] -rw------- 1 boinc boinc   1516240 Jan 11 12:15 agis_ddmendpoints.agis.ALL.json
[2026-01-11 12:28:28] -rw------- 1 boinc boinc    394369 Jan 11 12:15 log.47898826._021975.job.log.tgz.1
[2026-01-11 12:28:28] -rw------- 1 boinc boinc        95 Jan 11 12:15 pilot_heartbeat.json
[2026-01-11 12:28:28] -rw------- 1 boinc boinc      7829 Jan 11 12:15 heartbeat.json
[2026-01-11 12:28:28] -rw------- 1 boinc boinc      4833 Jan 11 12:16 pilotlog.txt
[2026-01-11 12:28:28] -rw------- 1 boinc boinc   2024719 Jan 11 12:16 log.47898826._021975.job.log.1
[2026-01-11 12:28:28] -rw------- 1 boinc boinc       357 Jan 11 12:16 output.list
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc       620 Jan 11 12:16 runtime_log
[2026-01-11 12:28:28] -rw------- 1 boinc boinc   2437120 Jan 11 12:16 result.tar.gz
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc      9206 Jan 11 12:16 runtime_log.err
[2026-01-11 12:28:28] -rw------- 1 boinc boinc       665 Jan 11 12:16 9MoNDmnB0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZjjKDmnblr2n.diag
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc        27 Jan 11 12:28 wrapper_checkpoint.txt
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc      8192 Jan 11 12:28 boinc_mmap_file
[2026-01-11 12:28:28] -rw-r--r-- 1 boinc boinc     21167 Jan 11 12:28 stderr.txt
[2026-01-11 12:28:28] HITS file was successfully produced:
[2026-01-11 12:28:28] -rw------- 1 boinc boinc 218385984 Jan 11 12:14 shared/HITS.pool.root.1
[2026-01-11 12:28:28]  *** Contents of shared directory: ***
[2026-01-11 12:28:28] total 437448
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc 226507190 Jan 11 08:15 ATLAS.root_0
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc    592400 Jan 11 08:15 input.tar.gz
[2026-01-11 12:28:28] -rw-r--r-- 2 boinc boinc     15847 Jan 11 08:15 start_atlas.sh
[2026-01-11 12:28:28] -rw------- 1 boinc boinc 218385984 Jan 11 12:14 HITS.pool.root.1
[2026-01-11 12:28:28] -rw------- 1 boinc boinc   2437120 Jan 11 12:16 result.tar.gz
12:28:30 (3936356): run_atlas exited; CPU time 55707.141818
12:28:30 (3936356): called boinc_finish(0)

</stderr_txt>
]]>

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