Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:35:30 (248345): wrapper (7.7.26015): starting
16:35:30 (248345): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 16:35:30] Arguments: --nthreads 4
[2026-01-11 16:35:30] Threads: 4
[2026-01-11 16:35:30] Checking for CVMFS
[2026-01-11 16:35:30] No cvmfs_config command found, will try listing directly
[2026-01-11 16:35:30] CVMFS is ok
[2026-01-11 16:35:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 16:35:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 16:35:30] Further information can be found at the LHC@home message board.
[2026-01-11 16:35:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 16:35:30] Checking for apptainer binary...
[2026-01-11 16:35:30] which: no apptainer in ((null))
[2026-01-11 16:35:30] apptainer is not installed, using version from CVMFS
[2026-01-11 16:35:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 16:35:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-01-11 16:35:30] apptainer works
[2026-01-11 16:35:30] Set ATHENA_PROC_NUMBER=4
[2026-01-11 16:35:30] Set ATHENA_CORE_NUMBER=4
[2026-01-11 16:35:30] Starting ATLAS job with PandaID=6962918792
[2026-01-11 16:35:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 20:59:15]  *** The last 200 lines of the pilot log: ***
[2026-01-11 20:59:15] 2026-01-11 19:44:05,857 | INFO     | executing command: lscpu
[2026-01-11 20:59:15] 2026-01-11 19:44:05,911 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 20:59:15] 2026-01-11 19:44:07,375 | INFO     | time since job start (14906s) is within the limit (174528.0s)
[2026-01-11 20:59:15] 2026-01-11 19:44:08,183 | INFO     | monitor loop #1082: job 0:6962918792 is in state 'finished'
[2026-01-11 20:59:15] 2026-01-11 19:44:08,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 20:59:15] 2026-01-11 19:44:09,380 | INFO     | time since job start (14908s) is within the limit (174528.0s)
[2026-01-11 20:59:15] 2026-01-11 19:44:10,686 | INFO     | monitor loop #1083: job 0:6962918792 is in state 'finished'
[2026-01-11 20:59:15] 2026-01-11 19:44:10,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,386 | INFO     | time since job start (14910s) is within the limit (174528.0s)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,944 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 20:59:15] 2026-01-11 19:44:11,955 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2538.593421875001
[2026-01-11 20:59:15] 2026-01-11 19:44:11,970 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6962918792/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,971 | INFO     | extracted standard info from prmon json
[2026-01-11 20:59:15] 2026-01-11 19:44:11,971 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 20:59:15] 2026-01-11 19:44:11,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 20:59:15] 2026-01-11 19:44:11,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 20:59:15] 2026-01-11 19:44:11,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 20:59:15] 2026-01-11 19:44:11,977 | INFO     | fitting pss+swap vs Time
[2026-01-11 20:59:15] 2026-01-11 19:44:11,977 | INFO     | sum of square deviations: 4504437945.0
[2026-01-11 20:59:15] 2026-01-11 19:44:11,979 | INFO     | sum of deviations: 11518588672.500002
[2026-01-11 20:59:15] 2026-01-11 19:44:11,979 | INFO     | mean x: 1768153179.5
[2026-01-11 20:59:15] 2026-01-11 19:44:11,979 | INFO     | mean y: 2353289.3647540985
[2026-01-11 20:59:15] 2026-01-11 19:44:11,979 | INFO     | intersect: -4519105199.644037
[2026-01-11 20:59:15] 2026-01-11 19:44:11,979 | INFO     | chi2: 1.2914788025364479
[2026-01-11 20:59:15] 2026-01-11 19:44:11,980 | INFO     | sum of square deviations: 4233158440.0
[2026-01-11 20:59:15] 2026-01-11 19:44:11,981 | INFO     | sum of deviations: 10768302976.999998
[2026-01-11 20:59:15] 2026-01-11 19:44:11,981 | INFO     | mean x: 1768153027.0
[2026-01-11 20:59:15] 2026-01-11 19:44:11,982 | INFO     | mean y: 2352867.539748954
[2026-01-11 20:59:15] 2026-01-11 19:44:11,982 | INFO     | intersect: -4495472520.832829
[2026-01-11 20:59:15] 2026-01-11 19:44:11,982 | INFO     | chi2: 1.2914068961141085
[2026-01-11 20:59:15] 2026-01-11 19:44:11,982 | INFO     | current chi2=1.2914068961141085 (change=0.005567758618888466 %)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,982 | INFO     | right removable region: 238
[2026-01-11 20:59:15] 2026-01-11 19:44:11,983 | INFO     | sum of square deviations: 4233158440.0
[2026-01-11 20:59:15] 2026-01-11 19:44:11,984 | INFO     | sum of deviations: -17899870561.000004
[2026-01-11 20:59:15] 2026-01-11 19:44:11,984 | INFO     | mean x: 1768153332.0
[2026-01-11 20:59:15] 2026-01-11 19:44:11,984 | INFO     | mean y: 2369648.648535565
[2026-01-11 20:59:15] 2026-01-11 19:44:11,984 | INFO     | intersect: 7478989346.067862
[2026-01-11 20:59:15] 2026-01-11 19:44:11,985 | INFO     | chi2: 0.0716130980330208
[2026-01-11 20:59:15] 2026-01-11 19:44:11,985 | INFO     | current chi2=0.0716130980330208 (change=94.45495366301223 %)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,985 | INFO     | sum of square deviations: 3972995422.5
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | sum of deviations: -15496425939.500002
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | mean x: 1768153484.5
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | mean y: 2368224.7393162395
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | intersect: 6898942876.461839
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | chi2: 0.06689761446240888
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | current chi2=0.06689761446240888 (change=6.584666353126634 %)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,987 | INFO     | left removable region: 20
[2026-01-11 20:59:15] 2026-01-11 19:44:11,988 | INFO     | sum of square deviations: 3212467674.5
[2026-01-11 20:59:15] 2026-01-11 19:44:11,989 | INFO     | sum of deviations: -6214185259.499985
[2026-01-11 20:59:15] 2026-01-11 19:44:11,989 | INFO     | mean x: 1768153606.5
[2026-01-11 20:59:15] 2026-01-11 19:44:11,989 | INFO     | mean y: 2361829.6926605506
[2026-01-11 20:59:15] 2026-01-11 19:44:11,989 | INFO     | intersect: 3422671445.649867
[2026-01-11 20:59:15] 2026-01-11 19:44:11,990 | INFO     | chi2: 0.04034829590681282
[2026-01-11 20:59:15] 2026-01-11 19:44:11,990 | INFO     | current memory leak: -1.93 B/s (using 218 data points, chi2=0.04)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,990 | INFO     | could have reported an average CPU frequency of 2494 MHz (12 samples)
[2026-01-11 20:59:15] 2026-01-11 19:44:11,990 | INFO     | ..............................
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . Timing measurements:
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . get job = 0 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . initial setup = 1 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . payload setup = 6 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . stage-in = 0 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . payload execution = 14875 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . stage-out = 1 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | . log creation = 0 s
[2026-01-11 20:59:15] 2026-01-11 19:44:11,991 | INFO     | ..............................
[2026-01-11 20:59:15] 2026-01-11 19:44:12,084 | INFO     | 
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | job summary report
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | --------------------------------------------------
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | PanDA job id: 6962918792
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | task id: 47898826
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | errors: (none)
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | pilot state: finished 
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | transexitcode: 0
[2026-01-11 20:59:15] 2026-01-11 19:44:12,085 | INFO     | exeerrorcode: 0
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | exeerrordiag: 
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | exitcode: 0
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | exitmsg: OK
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | cpuconsumptiontime: 57655 s
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | nevents: 400
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | neventsw: 0
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | pid: 259270
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | pgrp: 259270
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | corecount: 4
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | event service: False
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | sizes: {0: 2283753, 1: 2284008, 5: 2284270, 12: 2284326, 14885: 2315345, 14887: 2324549, 14895: 2324687}
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | --------------------------------------------------
[2026-01-11 20:59:15] 2026-01-11 19:44:12,086 | INFO     | 
[2026-01-11 20:59:15] 2026-01-11 19:44:12,087 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-01-11 20:59:15] 2026-01-11 19:44:12,109 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | job 6962918792 has completed (purged errors)
[2026-01-11 20:59:15] 2026-01-11 19:44:12,111 | INFO     | overall cleanup function is called
[2026-01-11 20:59:15] 2026-01-11 19:44:13,119 | INFO     | --- collectZombieJob: --- 10, [259270]
[2026-01-11 20:59:15] 2026-01-11 19:44:13,119 | INFO     | zombie collector waiting for pid 259270
[2026-01-11 20:59:15] 2026-01-11 19:44:13,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 20:59:15] 2026-01-11 19:44:13,120 | INFO     | collected zombie processes
[2026-01-11 20:59:15] 2026-01-11 19:44:13,120 | INFO     | will attempt to kill all subprocesses of pid=259270
[2026-01-11 20:59:15] 2026-01-11 19:44:13,508 | INFO     | process IDs to be killed: [259270] (in reverse order)
[2026-01-11 20:59:15] 2026-01-11 19:44:13,616 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 20:59:15] 2026-01-11 19:44:13,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 20:59:15] 2026-01-11 19:44:13,631 | INFO     | did not find any defunct processes belonging to 259270
[2026-01-11 20:59:15] 2026-01-11 19:44:13,644 | INFO     | did not find any defunct processes belonging to 259270
[2026-01-11 20:59:15] 2026-01-11 19:44:13,645 | INFO     | ready for new job
[2026-01-11 20:59:15] 2026-01-11 19:44:13,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 20:59:15] 2026-01-11 19:44:13,647 | INFO     | ***************************************
[2026-01-11 20:59:15] 2026-01-11 19:44:13,648 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 20:59:15] 2026-01-11 19:44:13,648 | INFO     | ***************************************
[2026-01-11 20:59:15] 2026-01-11 19:44:13,648 | INFO     | 
[2026-01-11 20:59:15] 2026-01-11 19:44:13,652 | INFO     | architecture information:
[2026-01-11 20:59:15] 2026-01-11 19:44:13,653 | INFO     | executing command: cat /etc/os-release
[2026-01-11 20:59:15] 2026-01-11 19:44:13,668 | INFO     | cat /etc/os-release:
[2026-01-11 20:59:15] NAME="CentOS Linux"
[2026-01-11 20:59:15] VERSION="7 (Core)"
[2026-01-11 20:59:15] ID="centos"
[2026-01-11 20:59:15] ID_LIKE="rhel fedora"
[2026-01-11 20:59:15] VERSION_ID="7"
[2026-01-11 20:59:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 20:59:15] ANSI_COLOR="0;31"
[2026-01-11 20:59:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 20:59:15] HOME_URL="https://www.centos.org/"
[2026-01-11 20:59:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 20:59:15] 
[2026-01-11 20:59:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 20:59:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 20:59:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 20:59:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 20:59:15] 
[2026-01-11 20:59:15] 2026-01-11 19:44:13,669 | INFO     | ***************************************
[2026-01-11 20:59:15] 2026-01-11 19:44:14,170 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-01-11 20:59:15] 2026-01-11 19:44:14,186 | INFO     | sufficient remaining disk space (699005927424 B)
[2026-01-11 20:59:15] 2026-01-11 19:44:14,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 20:59:15] 2026-01-11 19:44:14,187 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 20:59:15] 2026-01-11 19:44:14,187 | INFO     | update_server=False
[2026-01-11 20:59:15] 2026-01-11 19:44:14,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 20:59:15] 2026-01-11 19:44:14,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 20:59:15] 2026-01-11 19:44:14,195 | INFO     | aborting loop
[2026-01-11 20:59:15] 2026-01-11 19:44:14,521 | INFO     | all data control threads have been joined
[2026-01-11 20:59:15] 2026-01-11 19:44:14,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 20:59:15] 2026-01-11 19:44:14,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 20:59:15] 2026-01-11 19:44:14,911 | INFO     | all payload control threads have been joined
[2026-01-11 20:59:15] 2026-01-11 19:44:15,191 | INFO     | [job] retrieve thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:15,197 | INFO     | [job] job monitor thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:15,440 | INFO     | all job control threads have been joined
[2026-01-11 20:59:15] 2026-01-11 19:44:15,526 | INFO     | [data] control thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:15,603 | INFO     | [job] validate thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:15,794 | INFO     | [payload] validate_post thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:15,914 | INFO     | [payload] control thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,092 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,266 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,309 | INFO     | [payload] failed_post thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,312 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,362 | INFO     | [data] copytool_in thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,446 | INFO     | [job] control thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,499 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:16,639 | INFO     | [data] copytool_out thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:17,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 20:59:15] 2026-01-11 19:44:18,099 | INFO     | [job] queue monitor thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:18,744 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 20:59:15] 2026-01-11 19:44:44,951 | INFO     | PID=252264 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 20:59:15] 2026-01-11 19:44:44,951 | INFO     | .. there are 2 such processes running
[2026-01-11 20:59:15] 2026-01-11 19:44:44,951 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 20:59:15] 2026-01-11 19:44:44,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 20:59:15] 2026-01-11 19:44:44,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 20:59:15] 2026-01-11 19:45:03,769 | INFO     | [monitor] cgroup control has ended
[2026-01-11 20:59:15] 2026-01-11 19:45:04,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23364432615232)>', '<ExcThread(monitor, started 23364179527424)>']
[2026-01-11 20:59:15] 2026-01-11 19:45:05,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 20:59:15] 2026-01-11 19:45:05,040 | INFO     | [monitor] control thread has ended
[2026-01-11 20:59:15] 2026-01-11 19:45:09,187 | INFO     | all workflow threads have been joined
[2026-01-11 20:59:15] 2026-01-11 19:45:09,188 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 20:59:15] 2026-01-11 19:45:09,188 | INFO     | traces error code: 0
[2026-01-11 20:59:15] 2026-01-11 19:45:09,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 20:59:15] 2026-01-11 19:45:09,331 [wrapper] ==== pilot stdout END ====
[2026-01-11 20:59:15] 2026-01-11 19:45:09,334 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 20:59:15] 2026-01-11 19:45:09,336 [wrapper] pilotpid: 252264
[2026-01-11 20:59:15] 2026-01-11 19:45:09,339 [wrapper] Pilot exit status: 0
[2026-01-11 20:59:15] 2026-01-11 19:45:09,348 [wrapper] pandaids: 6962918792
[2026-01-11 20:59:15] 2026-01-11 19:45:09,422 [wrapper] cleanup supervisor_pilot  445210 252265
[2026-01-11 20:59:15] 2026-01-11 19:45:09,426 [wrapper] Test setup, not cleaning
[2026-01-11 20:59:15] 2026-01-11 19:45:09,428 [wrapper] apfmon messages muted
[2026-01-11 20:59:15] 2026-01-11 19:45:09,431 [wrapper] ==== wrapper stdout END ====
[2026-01-11 20:59:15] 2026-01-11 19:45:09,434 [wrapper] ==== wrapper stderr END ====
[2026-01-11 20:59:15]  *** Error codes and diagnostics ***
[2026-01-11 20:59:15]     "exeErrorCode": 0,
[2026-01-11 20:59:15]     "exeErrorDiag": "",
[2026-01-11 20:59:15]     "pilotErrorCode": 0,
[2026-01-11 20:59:15]     "pilotErrorDiag": "",
[2026-01-11 20:59:15]  *** Listing of results directory ***
[2026-01-11 20:59:15] total 445524
[2026-01-11 20:59:15] -rwx------ 1 boinc boinc     36322 Jan  8 09:06 runpilot2-wrapper.sh
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:11 queuedata.json
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:11 pilot3.tar.gz
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc       100 Jan 11 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 20:59:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 16:35 run_atlas
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc       105 Jan 11 16:35 job.xml
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc      6637 Jan 11 16:35 init_data.xml
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc 225852035 Jan 11 16:35 EVNT.47898824._000325.pool.root.1
[2026-01-11 20:59:15] drwxrwx--x 2 boinc boinc      4096 Jan 11 16:35 shared
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc    592403 Jan 11 16:35 input.tar.gz
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:35 start_atlas.sh
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc         0 Jan 11 16:35 boinc_lockfile
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc      2519 Jan 11 16:35 pandaJob.out
[2026-01-11 20:59:15] -rw------- 1 boinc boinc    989556 Jan 11 16:35 agis_schedconf.cvmfs.json
[2026-01-11 20:59:15] drwx------ 5 boinc boinc      4096 Jan 11 16:35 pilot3
[2026-01-11 20:59:15] -rw------- 1 boinc boinc 221412839 Jan 11 20:43 HITS.47898826._020812.pool.root.1
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc       528 Jan 11 20:43 boinc_task_state.xml
[2026-01-11 20:59:15] -rw------- 1 boinc boinc      1034 Jan 11 20:43 memory_monitor_summary.json
[2026-01-11 20:59:15] -rw------- 1 boinc boinc   1516240 Jan 11 20:44 agis_ddmendpoints.agis.ALL.json
[2026-01-11 20:59:15] -rw------- 1 boinc boinc    418433 Jan 11 20:44 log.47898826._020812.job.log.tgz.1
[2026-01-11 20:59:15] -rw------- 1 boinc boinc      7827 Jan 11 20:44 heartbeat.json
[2026-01-11 20:59:15] -rw------- 1 boinc boinc        95 Jan 11 20:44 pilot_heartbeat.json
[2026-01-11 20:59:15] -rw------- 1 boinc boinc      4832 Jan 11 20:45 pilotlog.txt
[2026-01-11 20:59:15] -rw------- 1 boinc boinc   2103220 Jan 11 20:45 log.47898826._020812.job.log.1
[2026-01-11 20:59:15] -rw------- 1 boinc boinc       357 Jan 11 20:45 output.list
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc       620 Jan 11 20:45 runtime_log
[2026-01-11 20:59:15] -rw------- 1 boinc boinc   2539520 Jan 11 20:45 result.tar.gz
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc      9206 Jan 11 20:45 runtime_log.err
[2026-01-11 20:59:15] -rw------- 1 boinc boinc       664 Jan 11 20:45 okWLDmkD0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXpjKDm1JhkVo.diag
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc        26 Jan 11 20:58 wrapper_checkpoint.txt
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc      8192 Jan 11 20:59 boinc_mmap_file
[2026-01-11 20:59:15] -rw-r--r-- 1 boinc boinc     21168 Jan 11 20:59 stderr.txt
[2026-01-11 20:59:15] HITS file was successfully produced:
[2026-01-11 20:59:15] -rw------- 1 boinc boinc 221412839 Jan 11 20:43 shared/HITS.pool.root.1
[2026-01-11 20:59:15]  *** Contents of shared directory: ***
[2026-01-11 20:59:15] total 439864
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc 225852035 Jan 11 16:35 ATLAS.root_0
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc    592403 Jan 11 16:35 input.tar.gz
[2026-01-11 20:59:15] -rw-r--r-- 2 boinc boinc     15847 Jan 11 16:35 start_atlas.sh
[2026-01-11 20:59:15] -rw------- 1 boinc boinc 221412839 Jan 11 20:43 HITS.pool.root.1
[2026-01-11 20:59:15] -rw------- 1 boinc boinc   2539520 Jan 11 20:45 result.tar.gz
20:59:17 (248345): run_atlas exited; CPU time 58302.222076
20:59:17 (248345): called boinc_finish(0)

</stderr_txt>
]]>

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